RNA–Protein interactions for RNA: ENST00000472620.5

PMM1-205, Transcript of phosphomannomutase 1, humanhuman

TSL 5

Gene PMM1, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-205ENST00000472620 NISCHQ9Y2I1 1504 aa34.48■■■■□ 3.11
PMM1-205ENST00000472620 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
PMM1-205ENST00000472620 ABCC9O60706 1549 aa30.52■■■□□ 2.48
PMM1-205ENST00000472620 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
PMM1-205ENST00000472620 NACADO15069 1562 aa29.1■■■□□ 2.25
PMM1-205ENST00000472620 DCAF8L2P0C7V8 631 aa28.87■■■□□ 2.21
PMM1-205ENST00000472620 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
PMM1-205ENST00000472620 ZCCHC6Q5VYS8 1495 aaKnown RBP28.66■■■□□ 2.18
PMM1-205ENST00000472620 DCAF1Q9Y4B6 1507 aa28.55■■■□□ 2.16
PMM1-205ENST00000472620 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
PMM1-205ENST00000472620 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
PMM1-205ENST00000472620 DNAJC5BQ9UF47 199 aa28.41■■■□□ 2.14
PMM1-205ENST00000472620 BICRAQ9NZM4 1560 aa28.37■■■□□ 2.13
PMM1-205ENST00000472620 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
PMM1-205ENST00000472620 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
PMM1-205ENST00000472620 EIF4G1Q04637 1599 aaKnown RBP27.64■■■□□ 2.01
PMM1-205ENST00000472620 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
PMM1-205ENST00000472620 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
PMM1-205ENST00000472620 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
PMM1-205ENST00000472620 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
PMM1-205ENST00000472620 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
PMM1-205ENST00000472620 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
PMM1-205ENST00000472620 SMARCA2P51531 1590 aa26.74■■□□□ 1.87
PMM1-205ENST00000472620 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
PMM1-205ENST00000472620 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
PMM1-205ENST00000472620 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
PMM1-205ENST00000472620 BAZ1BQ9UIG0 1483 aaKnown RBP26.54■■□□□ 1.84
PMM1-205ENST00000472620 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
PMM1-205ENST00000472620 NESP48681 1621 aa26.31■■□□□ 1.8
PMM1-205ENST00000472620 CUX2O14529 1486 aa26.25■■□□□ 1.79
PMM1-205ENST00000472620 WIZO95785 1651 aa26.23■■□□□ 1.79
PMM1-205ENST00000472620 LAMC3Q9Y6N6 1575 aa26.21■■□□□ 1.79
PMM1-205ENST00000472620 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
PMM1-205ENST00000472620 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
PMM1-205ENST00000472620 PDS5BQ9NTI5 1447 aa26.03■■□□□ 1.76
PMM1-205ENST00000472620 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
PMM1-205ENST00000472620 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
PMM1-205ENST00000472620 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
PMM1-205ENST00000472620 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
PMM1-205ENST00000472620 DNAJC5Q9H3Z4 198 aa25.9■■□□□ 1.74
PMM1-205ENST00000472620 CFTRP13569 1480 aa25.82■■□□□ 1.72
PMM1-205ENST00000472620 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
PMM1-205ENST00000472620 WDR62O43379 1518 aa25.74■■□□□ 1.71
PMM1-205ENST00000472620 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
PMM1-205ENST00000472620 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
PMM1-205ENST00000472620 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
PMM1-205ENST00000472620 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
PMM1-205ENST00000472620 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
PMM1-205ENST00000472620 TOPBP1Q92547 1522 aa25.28■■□□□ 1.64
PMM1-205ENST00000472620 ABCC8Q09428 1581 aa25.26■■□□□ 1.63
PMM1-205ENST00000472620 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
PMM1-205ENST00000472620 DNMBPQ6XZF7 1577 aa25.21■■□□□ 1.63
PMM1-205ENST00000472620 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.61
PMM1-205ENST00000472620 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
PMM1-205ENST00000472620 POLA1P09884 1462 aaPredicted RBP25.05■■□□□ 1.6
PMM1-205ENST00000472620 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
PMM1-205ENST00000472620 EIF4G3O43432 1585 aaKnown RBP25.02■■□□□ 1.6
PMM1-205ENST00000472620 CUX1P39880 1505 aa24.94■■□□□ 1.58
PMM1-205ENST00000472620 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.581e-7■■■■■ 37.4
PMM1-205ENST00000472620 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
PMM1-205ENST00000472620 SOGA1O94964 1423 aa24.92■■□□□ 1.58
PMM1-205ENST00000472620 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
PMM1-205ENST00000472620 WDR97A6NE52 1622 aa24.84■■□□□ 1.57
PMM1-205ENST00000472620 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
PMM1-205ENST00000472620 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
PMM1-205ENST00000472620 CHD1O14646 1710 aa24.75■■□□□ 1.55
PMM1-205ENST00000472620 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
PMM1-205ENST00000472620 RIMBP3CA6NJZ7 1639 aa24.71■■□□□ 1.55
PMM1-205ENST00000472620 RIMBP3BA6NNM3 1639 aa24.71■■□□□ 1.55
PMM1-205ENST00000472620 RIMBP3Q9UFD9 1639 aa24.71■■□□□ 1.55
PMM1-205ENST00000472620 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.54
PMM1-205ENST00000472620 GRIN2BQ13224 1484 aa24.68■■□□□ 1.54
PMM1-205ENST00000472620 MAGI1Q96QZ7 1491 aaPredicted RBP24.67■■□□□ 1.54
PMM1-205ENST00000472620 ARHGEF11O15085 1522 aa24.67■■□□□ 1.54
PMM1-205ENST00000472620 ABCA10Q8WWZ4 1543 aa24.67■■□□□ 1.54
PMM1-205ENST00000472620 FBLN2P98095 1184 aa24.66■■□□□ 1.54
PMM1-205ENST00000472620 WRNQ14191 1432 aaPredicted RBP eCLIP24.63■■□□□ 1.539e-6■■■■■ 50.1
PMM1-205ENST00000472620 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
PMM1-205ENST00000472620 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
PMM1-205ENST00000472620 BIVM-ERCC5R4GMW8 1640 aa24.62■■□□□ 1.53
PMM1-205ENST00000472620 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
PMM1-205ENST00000472620 SYNJ2O15056 1496 aa24.58■■□□□ 1.53
PMM1-205ENST00000472620 SYNJ1O43426 1573 aa24.58■■□□□ 1.53
PMM1-205ENST00000472620 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
PMM1-205ENST00000472620 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
PMM1-205ENST00000472620 CLASP1Q7Z460 1538 aa24.53■■□□□ 1.52
PMM1-205ENST00000472620 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
PMM1-205ENST00000472620 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
PMM1-205ENST00000472620 ADAMTS12P58397 1594 aa24.39■■□□□ 1.5
PMM1-205ENST00000472620 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
PMM1-205ENST00000472620 ERICH3Q5RHP9 1530 aa24.37■■□□□ 1.49
PMM1-205ENST00000472620 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
PMM1-205ENST00000472620 NUP160Q12769 1436 aa24.3■■□□□ 1.48
PMM1-205ENST00000472620 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
PMM1-205ENST00000472620 SHROOM2Q13796 1616 aa24.16■■□□□ 1.46
PMM1-205ENST00000472620 ERCC6L2Q5T890 1561 aa24.14■■□□□ 1.45
PMM1-205ENST00000472620 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
PMM1-205ENST00000472620 IGF1RP08069 1367 aa24.1■■□□□ 1.45
PMM1-205ENST00000472620 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
PMM1-205ENST00000472620 CUL7Q14999 1698 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms