RNA–Protein interactions for RNA: ENST00000472290.1

GCKR-205, Transcript of glucokinase regulator, humanhuman

TSL 1 (best)

Gene GCKR, Length 1,302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCKR-205ENST00000472290 NISCHQ9Y2I1 1504 aa32.24■■■□□ 2.75
GCKR-205ENST00000472290 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
GCKR-205ENST00000472290 ABCC9O60706 1549 aa27.95■■■□□ 2.06
GCKR-205ENST00000472290 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
GCKR-205ENST00000472290 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
GCKR-205ENST00000472290 RB1CC1Q8TDY2 1594 aa26.85■■□□□ 1.89
GCKR-205ENST00000472290 NACADO15069 1562 aa26.84■■□□□ 1.89
GCKR-205ENST00000472290 MYO15BQ96JP2 1530 aa26.69■■□□□ 1.86
GCKR-205ENST00000472290 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
GCKR-205ENST00000472290 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
GCKR-205ENST00000472290 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
GCKR-205ENST00000472290 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
GCKR-205ENST00000472290 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
GCKR-205ENST00000472290 SHROOM4Q9ULL8 1493 aa25.71■■□□□ 1.71
GCKR-205ENST00000472290 DNAJC5BQ9UF47 199 aa25.63■■□□□ 1.69
GCKR-205ENST00000472290 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
GCKR-205ENST00000472290 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
GCKR-205ENST00000472290 CECR2Q9BXF3 1484 aa25.16■■□□□ 1.62
GCKR-205ENST00000472290 SMARCA4P51532 1647 aa25■■□□□ 1.59
GCKR-205ENST00000472290 BAZ1AQ9NRL2 1556 aaPredicted RBP24.95■■□□□ 1.58
GCKR-205ENST00000472290 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.57
GCKR-205ENST00000472290 ATAD2BQ9ULI0 1458 aa24.85■■□□□ 1.57
GCKR-205ENST00000472290 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
GCKR-205ENST00000472290 SMARCA2P51531 1590 aa24.77■■□□□ 1.56
GCKR-205ENST00000472290 PEG3Q9GZU2 1588 aa24.72■■□□□ 1.55
GCKR-205ENST00000472290 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
GCKR-205ENST00000472290 WIZO95785 1651 aa24.63■■□□□ 1.53
GCKR-205ENST00000472290 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
GCKR-205ENST00000472290 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
GCKR-205ENST00000472290 TOP2AP11388 1531 aaKnown RBP24.32■■□□□ 1.48
GCKR-205ENST00000472290 NESP48681 1621 aa24.24■■□□□ 1.47
GCKR-205ENST00000472290 LAMC3Q9Y6N6 1575 aa24.1■■□□□ 1.45
GCKR-205ENST00000472290 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
GCKR-205ENST00000472290 CADPSQ9ULU8 1353 aa24.08■■□□□ 1.45
GCKR-205ENST00000472290 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
GCKR-205ENST00000472290 ERCC6Q03468 1493 aa24.03■■□□□ 1.44
GCKR-205ENST00000472290 CFTRP13569 1480 aa23.96■■□□□ 1.43
GCKR-205ENST00000472290 PDS5BQ9NTI5 1447 aa23.94■■□□□ 1.42
GCKR-205ENST00000472290 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
GCKR-205ENST00000472290 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
GCKR-205ENST00000472290 THOC2Q8NI27 1593 aaKnown RBP23.81■■□□□ 1.4
GCKR-205ENST00000472290 PRDM2Q13029 1718 aa23.78■■□□□ 1.4
GCKR-205ENST00000472290 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
GCKR-205ENST00000472290 CUX2O14529 1486 aa23.71■■□□□ 1.39
GCKR-205ENST00000472290 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
GCKR-205ENST00000472290 WDR62O43379 1518 aa23.63■■□□□ 1.37
GCKR-205ENST00000472290 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
GCKR-205ENST00000472290 TOPBP1Q92547 1522 aa23.45■■□□□ 1.34
GCKR-205ENST00000472290 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
GCKR-205ENST00000472290 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
GCKR-205ENST00000472290 CUX1P39880 1505 aa23.33■■□□□ 1.33
GCKR-205ENST00000472290 POLA1P09884 1462 aaPredicted RBP23.26■■□□□ 1.31
GCKR-205ENST00000472290 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
GCKR-205ENST00000472290 FGD5Q6ZNL6 1462 aa23.22■■□□□ 1.31
GCKR-205ENST00000472290 ZNF608Q9ULD9 1512 aaPredicted RBP23.2■■□□□ 1.3
GCKR-205ENST00000472290 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
GCKR-205ENST00000472290 RAD54L2Q9Y4B4 1467 aa23.19■■□□□ 1.3
GCKR-205ENST00000472290 WRNQ14191 1432 aaPredicted RBP eCLIP23.18■■□□□ 1.3
GCKR-205ENST00000472290 SOGA1O94964 1423 aa23.16■■□□□ 1.3
GCKR-205ENST00000472290 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
GCKR-205ENST00000472290 TOP2BQ02880 1626 aa23.12■■□□□ 1.29
GCKR-205ENST00000472290 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
GCKR-205ENST00000472290 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.283e-7■■■■■ 33.3
GCKR-205ENST00000472290 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
GCKR-205ENST00000472290 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
GCKR-205ENST00000472290 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
GCKR-205ENST00000472290 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
GCKR-205ENST00000472290 DNAJC5Q9H3Z4 198 aa22.94■■□□□ 1.26
GCKR-205ENST00000472290 GAPVD1Q14C86 1478 aa22.89■■□□□ 1.25
GCKR-205ENST00000472290 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
GCKR-205ENST00000472290 GRIN2BQ13224 1484 aa22.86■■□□□ 1.25
GCKR-205ENST00000472290 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
GCKR-205ENST00000472290 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
GCKR-205ENST00000472290 CHD1O14646 1710 aa22.8■■□□□ 1.24
GCKR-205ENST00000472290 OSCARQ8IYS5 282 aa22.78■■□□□ 1.24
GCKR-205ENST00000472290 MAGI1Q96QZ7 1491 aaPredicted RBP22.77■■□□□ 1.24
GCKR-205ENST00000472290 FBLN2P98095 1184 aa22.76■■□□□ 1.23
GCKR-205ENST00000472290 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
GCKR-205ENST00000472290 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
GCKR-205ENST00000472290 CHMP7Q8WUX9 453 aaPredicted RBP22.69■■□□□ 1.22
GCKR-205ENST00000472290 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
GCKR-205ENST00000472290 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
GCKR-205ENST00000472290 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
GCKR-205ENST00000472290 IGF1RP08069 1367 aa22.61■■□□□ 1.21
GCKR-205ENST00000472290 FHAD1B1AJZ9 1412 aa22.61■■□□□ 1.21
GCKR-205ENST00000472290 RUSC2Q8N2Y8 1516 aa22.6■■□□□ 1.21
GCKR-205ENST00000472290 GRIN2AQ12879 1464 aa22.58■■□□□ 1.21
GCKR-205ENST00000472290 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
GCKR-205ENST00000472290 CLASP1Q7Z460 1538 aa22.53■■□□□ 1.2
GCKR-205ENST00000472290 CEP170Q5SW79 1584 aa22.49■■□□□ 1.19
GCKR-205ENST00000472290 CUL7Q14999 1698 aa22.49■■□□□ 1.19
GCKR-205ENST00000472290 NUP160Q12769 1436 aa22.47■■□□□ 1.19
GCKR-205ENST00000472290 CARMIL1Q5VZK9 1371 aa22.46■■□□□ 1.19
GCKR-205ENST00000472290 RIMBP3CA6NJZ7 1639 aa22.44■■□□□ 1.18
GCKR-205ENST00000472290 RIMBP3BA6NNM3 1639 aa22.44■■□□□ 1.18
GCKR-205ENST00000472290 RIMBP3Q9UFD9 1639 aa22.44■■□□□ 1.18
GCKR-205ENST00000472290 ARHGEF11O15085 1522 aa22.43■■□□□ 1.18
GCKR-205ENST00000472290 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.16
GCKR-205ENST00000472290 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
GCKR-205ENST00000472290 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms