RNA–Protein interactions for RNA: ENST00000472067.1

CASP2-204, Transcript of caspase 2, humanhuman

TSL 2

Gene CASP2, Length 5,769 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP2-204ENST00000472067 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
CASP2-204ENST00000472067 DCAF8L2P0C7V8 631 aa17.92■□□□□ 0.46
CASP2-204ENST00000472067 FAM9AQ8IZU1 332 aaPredicted RBP16.6■□□□□ 0.25
CASP2-204ENST00000472067 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.21
CASP2-204ENST00000472067 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
CASP2-204ENST00000472067 ABCC9O60706 1549 aa16.12■□□□□ 0.17
CASP2-204ENST00000472067 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.15
CASP2-204ENST00000472067 APLP2Q06481 763 aa15.93■□□□□ 0.14
CASP2-204ENST00000472067 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
CASP2-204ENST00000472067 TRIM41Q8WV44 630 aa15.57■□□□□ 0.08
CASP2-204ENST00000472067 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
CASP2-204ENST00000472067 NACADO15069 1562 aa15.53■□□□□ 0.08
CASP2-204ENST00000472067 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
CASP2-204ENST00000472067 UBTFP17480 764 aaKnown RBP15.32■□□□□ 0.04
CASP2-204ENST00000472067 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
CASP2-204ENST00000472067 ATP1B4Q9UN42 357 aaPredicted RBP15.23■□□□□ 0.03
CASP2-204ENST00000472067 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
CASP2-204ENST00000472067 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
CASP2-204ENST00000472067 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
CASP2-204ENST00000472067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
CASP2-204ENST00000472067 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
CASP2-204ENST00000472067 MYT1LQ9UL68 1186 aa15.02■□□□□ -0
CASP2-204ENST00000472067 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
CASP2-204ENST00000472067 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
CASP2-204ENST00000472067 FBLN2P98095 1184 aa14.89□□□□□ -0.03
CASP2-204ENST00000472067 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
CASP2-204ENST00000472067 CDK11AQ9UQ88 783 aaPredicted RBP14.84□□□□□ -0.03
CASP2-204ENST00000472067 BAZ1AQ9NRL2 1556 aaPredicted RBP14.82□□□□□ -0.04
CASP2-204ENST00000472067 ZEB1P37275 1124 aaPredicted RBP14.79□□□□□ -0.04
CASP2-204ENST00000472067 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
CASP2-204ENST00000472067 TTBK1Q5TCY1 1321 aaPredicted RBP14.78□□□□□ -0.04
CASP2-204ENST00000472067 SMARCA2P51531 1590 aa14.74□□□□□ -0.05
CASP2-204ENST00000472067 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
CASP2-204ENST00000472067 PELP1Q8IZL8 1130 aaKnown RBP14.66□□□□□ -0.06
CASP2-204ENST00000472067 CHMP7Q8WUX9 453 aaPredicted RBP14.66□□□□□ -0.06
CASP2-204ENST00000472067 CHIC1Q5VXU3 224 aa14.64□□□□□ -0.07
CASP2-204ENST00000472067 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
CASP2-204ENST00000472067 ESF1Q9H501 851 aaKnown RBP14.6□□□□□ -0.07
CASP2-204ENST00000472067 EEA1Q15075 1411 aa14.57□□□□□ -0.08
CASP2-204ENST00000472067 ACIN1Q9UKV3 1341 aaKnown RBP14.55□□□□□ -0.08
CASP2-204ENST00000472067 CCER1Q8TC90 406 aaPredicted RBP14.53□□□□□ -0.08
CASP2-204ENST00000472067 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
CASP2-204ENST00000472067 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
CASP2-204ENST00000472067 PCGF6Q9BYE7 350 aa14.44□□□□□ -0.1
CASP2-204ENST00000472067 KIF27Q86VH2 1401 aa14.43□□□□□ -0.1
CASP2-204ENST00000472067 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
CASP2-204ENST00000472067 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
CASP2-204ENST00000472067 TRIM26Q12899 539 aaPredicted RBP14.38□□□□□ -0.11
CASP2-204ENST00000472067 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
CASP2-204ENST00000472067 ITGAEP38570 1179 aa14.33□□□□□ -0.11
CASP2-204ENST00000472067 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
CASP2-204ENST00000472067 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
CASP2-204ENST00000472067 PLEKHD1A6NEE1 506 aa14.28□□□□□ -0.12
CASP2-204ENST00000472067 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.13
CASP2-204ENST00000472067 ATAD2BQ9ULI0 1458 aa14.26□□□□□ -0.13
CASP2-204ENST00000472067 CARMIL2Q6F5E8 1435 aa14.25□□□□□ -0.13
CASP2-204ENST00000472067 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
CASP2-204ENST00000472067 TSPY4P0CV99 314 aa14.24□□□□□ -0.13
CASP2-204ENST00000472067 TSPY10P0CW01 314 aa14.24□□□□□ -0.13
CASP2-204ENST00000472067 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.14
CASP2-204ENST00000472067 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
CASP2-204ENST00000472067 BCANQ96GW7 911 aa14.2□□□□□ -0.14
CASP2-204ENST00000472067 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
CASP2-204ENST00000472067 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
CASP2-204ENST00000472067 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
CASP2-204ENST00000472067 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
CASP2-204ENST00000472067 MTUS2Q5JR59 1369 aa14.17□□□□□ -0.14
CASP2-204ENST00000472067 SOGA1O94964 1423 aa14.14□□□□□ -0.15
CASP2-204ENST00000472067 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
CASP2-204ENST00000472067 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
CASP2-204ENST00000472067 LOC105371045A0A1W2PR82 267 aa14.12□□□□□ -0.15
CASP2-204ENST00000472067 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
CASP2-204ENST00000472067 CUX2O14529 1486 aa14.1□□□□□ -0.15
CASP2-204ENST00000472067 CENPBP07199 599 aaPredicted RBP14.09□□□□□ -0.15
CASP2-204ENST00000472067 CLIP1P30622 1438 aa14.09□□□□□ -0.15
CASP2-204ENST00000472067 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
CASP2-204ENST00000472067 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
CASP2-204ENST00000472067 CARMIL1Q5VZK9 1371 aa14.08□□□□□ -0.16
CASP2-204ENST00000472067 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
CASP2-204ENST00000472067 FANCD2Q9BXW9 1451 aa14.05□□□□□ -0.16
CASP2-204ENST00000472067 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
CASP2-204ENST00000472067 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
CASP2-204ENST00000472067 NEFMP07197 916 aa14.03□□□□□ -0.16
CASP2-204ENST00000472067 HMGXB3Q12766 1538 aa14.03□□□□□ -0.16
CASP2-204ENST00000472067 NEFLP07196 543 aa14.02□□□□□ -0.17
CASP2-204ENST00000472067 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.17
CASP2-204ENST00000472067 PPARGC1BQ86YN6 1023 aaKnown RBP14□□□□□ -0.17
CASP2-204ENST00000472067 POLR3GLQ9BT43 218 aa14□□□□□ -0.17
CASP2-204ENST00000472067 ARID4BQ4LE39 1312 aaPredicted RBP13.99□□□□□ -0.17
CASP2-204ENST00000472067 KCNH8Q96L42 1107 aa13.98□□□□□ -0.17
CASP2-204ENST00000472067 TNIKQ9UKE5 1360 aa13.96□□□□□ -0.17
CASP2-204ENST00000472067 CFDP1Q9UEE9 299 aaPredicted RBP13.94□□□□□ -0.18
CASP2-204ENST00000472067 FMN1Q68DA7 1419 aa13.93□□□□□ -0.18
CASP2-204ENST00000472067 KANK1Q14678 1352 aa13.92□□□□□ -0.18
CASP2-204ENST00000472067 MRC2Q9UBG0 1479 aa13.91□□□□□ -0.18
CASP2-204ENST00000472067 CHGAP10645 457 aaKnown RBP13.91□□□□□ -0.18
CASP2-204ENST00000472067 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.18
CASP2-204ENST00000472067 SLC24A1O60721 1099 aa13.9□□□□□ -0.18
CASP2-204ENST00000472067 PPP1R15AO75807 674 aaPredicted RBP13.89□□□□□ -0.19
CASP2-204ENST00000472067 RSPH4AQ5TD94 716 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms