RNA–Protein interactions for RNA: ENST00000472003.3

RN7SL479P-201, Transcript of RNA, 7SL, cytoplasmic 479, pseudogene, humanhuman

BASIC

Gene RN7SL479P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL479P-201ENST00000472003 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
RN7SL479P-201ENST00000472003 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
RN7SL479P-201ENST00000472003 ABCC9O60706 1549 aa27.67■■■□□ 2.02
RN7SL479P-201ENST00000472003 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
RN7SL479P-201ENST00000472003 NACADO15069 1562 aa26.46■■□□□ 1.83
RN7SL479P-201ENST00000472003 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
RN7SL479P-201ENST00000472003 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
RN7SL479P-201ENST00000472003 ZCCHC6Q5VYS8 1495 aaKnown RBP26.03■■□□□ 1.76
RN7SL479P-201ENST00000472003 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
RN7SL479P-201ENST00000472003 UNC13AQ9UPW8 1703 aa25.96■■□□□ 1.75
RN7SL479P-201ENST00000472003 BICRAQ9NZM4 1560 aa25.77■■□□□ 1.72
RN7SL479P-201ENST00000472003 DNAJC5BQ9UF47 199 aa25.72■■□□□ 1.71
RN7SL479P-201ENST00000472003 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
RN7SL479P-201ENST00000472003 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
RN7SL479P-201ENST00000472003 SCRIBQ14160 1630 aa25.45■■□□□ 1.66
RN7SL479P-201ENST00000472003 EIF4G1Q04637 1599 aaKnown RBP25.11■■□□□ 1.61
RN7SL479P-201ENST00000472003 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
RN7SL479P-201ENST00000472003 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
RN7SL479P-201ENST00000472003 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
RN7SL479P-201ENST00000472003 SMARCA4P51532 1647 aa24.38■■□□□ 1.49
RN7SL479P-201ENST00000472003 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
RN7SL479P-201ENST00000472003 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
RN7SL479P-201ENST00000472003 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
RN7SL479P-201ENST00000472003 HMGXB3Q12766 1538 aa24.29■■□□□ 1.48
RN7SL479P-201ENST00000472003 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
RN7SL479P-201ENST00000472003 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
RN7SL479P-201ENST00000472003 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.44
RN7SL479P-201ENST00000472003 CUX2O14529 1486 aa23.9■■□□□ 1.42
RN7SL479P-201ENST00000472003 ERCC6Q03468 1493 aa23.89■■□□□ 1.42
RN7SL479P-201ENST00000472003 NESP48681 1621 aa23.84■■□□□ 1.41
RN7SL479P-201ENST00000472003 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
RN7SL479P-201ENST00000472003 WIZO95785 1651 aa23.78■■□□□ 1.4
RN7SL479P-201ENST00000472003 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
RN7SL479P-201ENST00000472003 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
RN7SL479P-201ENST00000472003 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
RN7SL479P-201ENST00000472003 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
RN7SL479P-201ENST00000472003 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
RN7SL479P-201ENST00000472003 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.36
RN7SL479P-201ENST00000472003 DNAJC5Q9H3Z4 198 aa23.53■■□□□ 1.36
RN7SL479P-201ENST00000472003 CFTRP13569 1480 aa23.44■■□□□ 1.34
RN7SL479P-201ENST00000472003 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
RN7SL479P-201ENST00000472003 WDR62O43379 1518 aa23.41■■□□□ 1.34
RN7SL479P-201ENST00000472003 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
RN7SL479P-201ENST00000472003 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
RN7SL479P-201ENST00000472003 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
RN7SL479P-201ENST00000472003 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
RN7SL479P-201ENST00000472003 URB2Q14146 1524 aaKnown RBP23.15■■□□□ 1.3
RN7SL479P-201ENST00000472003 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
RN7SL479P-201ENST00000472003 TOPBP1Q92547 1522 aa22.95■■□□□ 1.26
RN7SL479P-201ENST00000472003 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
RN7SL479P-201ENST00000472003 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
RN7SL479P-201ENST00000472003 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
RN7SL479P-201ENST00000472003 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
RN7SL479P-201ENST00000472003 EIF4G3O43432 1585 aaKnown RBP22.73■■□□□ 1.23
RN7SL479P-201ENST00000472003 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
RN7SL479P-201ENST00000472003 OSCARQ8IYS5 282 aa22.72■■□□□ 1.23
RN7SL479P-201ENST00000472003 WDR97A6NE52 1622 aa22.64■■□□□ 1.22
RN7SL479P-201ENST00000472003 CUX1P39880 1505 aa22.62■■□□□ 1.21
RN7SL479P-201ENST00000472003 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
RN7SL479P-201ENST00000472003 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
RN7SL479P-201ENST00000472003 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.21
RN7SL479P-201ENST00000472003 SOGA1O94964 1423 aa22.57■■□□□ 1.2
RN7SL479P-201ENST00000472003 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
RN7SL479P-201ENST00000472003 CHD1O14646 1710 aa22.51■■□□□ 1.19
RN7SL479P-201ENST00000472003 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
RN7SL479P-201ENST00000472003 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
RN7SL479P-201ENST00000472003 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
RN7SL479P-201ENST00000472003 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
RN7SL479P-201ENST00000472003 MAGI1Q96QZ7 1491 aaPredicted RBP22.43■■□□□ 1.18
RN7SL479P-201ENST00000472003 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
RN7SL479P-201ENST00000472003 ARHGEF11O15085 1522 aa22.41■■□□□ 1.18
RN7SL479P-201ENST00000472003 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
RN7SL479P-201ENST00000472003 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
RN7SL479P-201ENST00000472003 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
RN7SL479P-201ENST00000472003 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
RN7SL479P-201ENST00000472003 ABCA5Q8WWZ7 1642 aa22.37■■□□□ 1.17
RN7SL479P-201ENST00000472003 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
RN7SL479P-201ENST00000472003 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
RN7SL479P-201ENST00000472003 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
RN7SL479P-201ENST00000472003 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
RN7SL479P-201ENST00000472003 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
RN7SL479P-201ENST00000472003 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
RN7SL479P-201ENST00000472003 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
RN7SL479P-201ENST00000472003 FBLN2P98095 1184 aa22.28■■□□□ 1.16
RN7SL479P-201ENST00000472003 CHMP7Q8WUX9 453 aaPredicted RBP22.24■■□□□ 1.15
RN7SL479P-201ENST00000472003 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
RN7SL479P-201ENST00000472003 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
RN7SL479P-201ENST00000472003 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
RN7SL479P-201ENST00000472003 GRIN2AQ12879 1464 aa22.12■■□□□ 1.13
RN7SL479P-201ENST00000472003 CYB5RLQ6IPT4 315 aa22.1■■□□□ 1.13
RN7SL479P-201ENST00000472003 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
RN7SL479P-201ENST00000472003 NUP160Q12769 1436 aa22.07■■□□□ 1.12
RN7SL479P-201ENST00000472003 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
RN7SL479P-201ENST00000472003 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
RN7SL479P-201ENST00000472003 KIF27Q86VH2 1401 aa21.89■■□□□ 1.09
RN7SL479P-201ENST00000472003 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
RN7SL479P-201ENST00000472003 CUL7Q14999 1698 aa21.87■■□□□ 1.09
RN7SL479P-201ENST00000472003 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
RN7SL479P-201ENST00000472003 IGF1RP08069 1367 aa21.84■■□□□ 1.09
RN7SL479P-201ENST00000472003 PRG4Q92954 1404 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms