RNA–Protein interactions for RNA: ENST00000471991.5

SFPQ-207, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 440 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-207ENST00000471991 NISCHQ9Y2I1 1504 aa34.57■■■■□ 3.12
SFPQ-207ENST00000471991 CCDC180Q9P1Z9 1646 aa30.98■■■□□ 2.55
SFPQ-207ENST00000471991 ABCC9O60706 1549 aa30.47■■■□□ 2.47
SFPQ-207ENST00000471991 RB1CC1Q8TDY2 1594 aa29.25■■■□□ 2.27
SFPQ-207ENST00000471991 NACADO15069 1562 aa29.12■■■□□ 2.25
SFPQ-207ENST00000471991 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
SFPQ-207ENST00000471991 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
SFPQ-207ENST00000471991 ZCCHC6Q5VYS8 1495 aaKnown RBP28.76■■■□□ 2.19
SFPQ-207ENST00000471991 UNC13AQ9UPW8 1703 aa28.68■■■□□ 2.18
SFPQ-207ENST00000471991 DCAF1Q9Y4B6 1507 aa28.61■■■□□ 2.17
SFPQ-207ENST00000471991 BICRAQ9NZM4 1560 aa28.36■■■□□ 2.13
SFPQ-207ENST00000471991 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
SFPQ-207ENST00000471991 SCRIBQ14160 1630 aa28.19■■■□□ 2.1
SFPQ-207ENST00000471991 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.1
SFPQ-207ENST00000471991 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
SFPQ-207ENST00000471991 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
SFPQ-207ENST00000471991 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
SFPQ-207ENST00000471991 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
SFPQ-207ENST00000471991 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
SFPQ-207ENST00000471991 BAZ1AQ9NRL2 1556 aaPredicted RBP26.84■■□□□ 1.89
SFPQ-207ENST00000471991 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
SFPQ-207ENST00000471991 ATAD2BQ9ULI0 1458 aa26.8■■□□□ 1.88
SFPQ-207ENST00000471991 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
SFPQ-207ENST00000471991 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
SFPQ-207ENST00000471991 PEG3Q9GZU2 1588 aa26.67■■□□□ 1.86
SFPQ-207ENST00000471991 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
SFPQ-207ENST00000471991 BAZ1BQ9UIG0 1483 aaKnown RBP26.59■■□□□ 1.85
SFPQ-207ENST00000471991 WIZO95785 1651 aa26.38■■□□□ 1.81
SFPQ-207ENST00000471991 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
SFPQ-207ENST00000471991 NESP48681 1621 aa26.28■■□□□ 1.8
SFPQ-207ENST00000471991 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
SFPQ-207ENST00000471991 RSF1Q96T23 1441 aaPredicted RBP26.18■■□□□ 1.78
SFPQ-207ENST00000471991 CUX2O14529 1486 aa26.15■■□□□ 1.78
SFPQ-207ENST00000471991 KIF21AQ7Z4S6 1674 aa26.08■■□□□ 1.77
SFPQ-207ENST00000471991 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
SFPQ-207ENST00000471991 THOC2Q8NI27 1593 aaKnown RBP26.04■■□□□ 1.76
SFPQ-207ENST00000471991 CADPSQ9ULU8 1353 aa26■■□□□ 1.75
SFPQ-207ENST00000471991 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
SFPQ-207ENST00000471991 CFTRP13569 1480 aa25.81■■□□□ 1.72
SFPQ-207ENST00000471991 PRDM2Q13029 1718 aa25.79■■□□□ 1.72
SFPQ-207ENST00000471991 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
SFPQ-207ENST00000471991 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
SFPQ-207ENST00000471991 FANCD2Q9BXW9 1451 aa25.74■■□□□ 1.71
SFPQ-207ENST00000471991 WDR62O43379 1518 aa25.73■■□□□ 1.71
SFPQ-207ENST00000471991 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
SFPQ-207ENST00000471991 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
SFPQ-207ENST00000471991 URB2Q14146 1524 aaKnown RBP25.51■■□□□ 1.67
SFPQ-207ENST00000471991 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
SFPQ-207ENST00000471991 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
SFPQ-207ENST00000471991 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
SFPQ-207ENST00000471991 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
SFPQ-207ENST00000471991 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
SFPQ-207ENST00000471991 ZNF608Q9ULD9 1512 aaPredicted RBP25.12■■□□□ 1.61
SFPQ-207ENST00000471991 EIF4G3O43432 1585 aaKnown RBP25.1■■□□□ 1.61
SFPQ-207ENST00000471991 TARBP1Q13395 1621 aaKnown RBP25.1■■□□□ 1.61
SFPQ-207ENST00000471991 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.6
SFPQ-207ENST00000471991 CUX1P39880 1505 aa25.01■■□□□ 1.59
SFPQ-207ENST00000471991 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
SFPQ-207ENST00000471991 RAD54L2Q9Y4B4 1467 aa24.94■■□□□ 1.58
SFPQ-207ENST00000471991 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
SFPQ-207ENST00000471991 SOGA1O94964 1423 aa24.92■■□□□ 1.58
SFPQ-207ENST00000471991 AQRO60306 1485 aaKnown RBP eCLIP24.91■■□□□ 1.58
SFPQ-207ENST00000471991 OSCARQ8IYS5 282 aa24.91■■□□□ 1.58
SFPQ-207ENST00000471991 CHD1O14646 1710 aa24.87■■□□□ 1.57
SFPQ-207ENST00000471991 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
SFPQ-207ENST00000471991 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
SFPQ-207ENST00000471991 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
SFPQ-207ENST00000471991 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
SFPQ-207ENST00000471991 SYNJ1O43426 1573 aa24.73■■□□□ 1.55
SFPQ-207ENST00000471991 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
SFPQ-207ENST00000471991 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
SFPQ-207ENST00000471991 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
SFPQ-207ENST00000471991 ABCA5Q8WWZ7 1642 aa24.71■■□□□ 1.55
SFPQ-207ENST00000471991 GRIN2BQ13224 1484 aa24.7■■□□□ 1.55
SFPQ-207ENST00000471991 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
SFPQ-207ENST00000471991 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
SFPQ-207ENST00000471991 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
SFPQ-207ENST00000471991 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
SFPQ-207ENST00000471991 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
SFPQ-207ENST00000471991 FBLN2P98095 1184 aa24.64■■□□□ 1.54
SFPQ-207ENST00000471991 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
SFPQ-207ENST00000471991 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
SFPQ-207ENST00000471991 SYNJ2O15056 1496 aa24.58■■□□□ 1.53
SFPQ-207ENST00000471991 CLASP1Q7Z460 1538 aa24.53■■□□□ 1.52
SFPQ-207ENST00000471991 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
SFPQ-207ENST00000471991 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
SFPQ-207ENST00000471991 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
SFPQ-207ENST00000471991 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
SFPQ-207ENST00000471991 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
SFPQ-207ENST00000471991 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
SFPQ-207ENST00000471991 CEP170Q5SW79 1584 aa24.32■■□□□ 1.48
SFPQ-207ENST00000471991 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
SFPQ-207ENST00000471991 NUP160Q12769 1436 aa24.28■■□□□ 1.48
SFPQ-207ENST00000471991 CUL7Q14999 1698 aa24.21■■□□□ 1.47
SFPQ-207ENST00000471991 KIF27Q86VH2 1401 aa24.21■■□□□ 1.47
SFPQ-207ENST00000471991 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
SFPQ-207ENST00000471991 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
SFPQ-207ENST00000471991 ERCC6L2Q5T890 1561 aa24.15■■□□□ 1.46
SFPQ-207ENST00000471991 IGF1RP08069 1367 aa24.1■■□□□ 1.45
SFPQ-207ENST00000471991 PRG4Q92954 1404 aaPredicted RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms