RNA–Protein interactions for RNA: ENST00000471818.1

SKIV2L-207, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-207ENST00000471818 NISCHQ9Y2I1 1504 aa39.4■■■■□ 3.9
SKIV2L-207ENST00000471818 CCDC180Q9P1Z9 1646 aa35.13■■■■□ 3.21
SKIV2L-207ENST00000471818 ABCC9O60706 1549 aa34.31■■■■□ 3.08
SKIV2L-207ENST00000471818 RB1CC1Q8TDY2 1594 aa33.11■■■□□ 2.89
SKIV2L-207ENST00000471818 NACADO15069 1562 aa33.07■■■□□ 2.88
SKIV2L-207ENST00000471818 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
SKIV2L-207ENST00000471818 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
SKIV2L-207ENST00000471818 DCAF8L2P0C7V8 631 aa32.79■■■□□ 2.84
SKIV2L-207ENST00000471818 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
SKIV2L-207ENST00000471818 UNC13AQ9UPW8 1703 aa32.23■■■□□ 2.75
SKIV2L-207ENST00000471818 BICRAQ9NZM4 1560 aa32.03■■■□□ 2.72
SKIV2L-207ENST00000471818 PABPN1Q86U42 306 aaKnown RBP eCLIP32■■■□□ 2.712e-6■■■□□ 17.4
SKIV2L-207ENST00000471818 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
SKIV2L-207ENST00000471818 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
SKIV2L-207ENST00000471818 DNAJC5BQ9UF47 199 aa31.55■■■□□ 2.64
SKIV2L-207ENST00000471818 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
SKIV2L-207ENST00000471818 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
SKIV2L-207ENST00000471818 CECR2Q9BXF3 1484 aa30.92■■■□□ 2.54
SKIV2L-207ENST00000471818 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
SKIV2L-207ENST00000471818 SMARCA4P51532 1647 aa30.57■■■□□ 2.48
SKIV2L-207ENST00000471818 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
SKIV2L-207ENST00000471818 SMARCA2P51531 1590 aa30.47■■■□□ 2.47
SKIV2L-207ENST00000471818 ATAD2BQ9ULI0 1458 aa30.45■■■□□ 2.47
SKIV2L-207ENST00000471818 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
SKIV2L-207ENST00000471818 HMGXB3Q12766 1538 aa30.36■■■□□ 2.45
SKIV2L-207ENST00000471818 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
SKIV2L-207ENST00000471818 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
SKIV2L-207ENST00000471818 RSF1Q96T23 1441 aaPredicted RBP29.94■■■□□ 2.38
SKIV2L-207ENST00000471818 WIZO95785 1651 aa29.92■■■□□ 2.38
SKIV2L-207ENST00000471818 LAMC3Q9Y6N6 1575 aa29.72■■■□□ 2.35
SKIV2L-207ENST00000471818 TOP2AP11388 1531 aaKnown RBP29.7■■■□□ 2.34
SKIV2L-207ENST00000471818 ERCC6Q03468 1493 aa29.66■■■□□ 2.34
SKIV2L-207ENST00000471818 NESP48681 1621 aa29.65■■■□□ 2.34
SKIV2L-207ENST00000471818 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
SKIV2L-207ENST00000471818 PDS5BQ9NTI5 1447 aa29.54■■■□□ 2.32
SKIV2L-207ENST00000471818 CUX2O14529 1486 aa29.49■■■□□ 2.31
SKIV2L-207ENST00000471818 CFTRP13569 1480 aa29.39■■■□□ 2.3
SKIV2L-207ENST00000471818 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
SKIV2L-207ENST00000471818 THOC2Q8NI27 1593 aaKnown RBP29.31■■■□□ 2.28
SKIV2L-207ENST00000471818 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
SKIV2L-207ENST00000471818 FANCD2Q9BXW9 1451 aa29.21■■■□□ 2.27
SKIV2L-207ENST00000471818 CEP164Q9UPV0 1460 aa29.21■■■□□ 2.27
SKIV2L-207ENST00000471818 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
SKIV2L-207ENST00000471818 PRDM2Q13029 1718 aa29.14■■■□□ 2.25
SKIV2L-207ENST00000471818 WDR62O43379 1518 aa29.1■■■□□ 2.25
SKIV2L-207ENST00000471818 SUPT5HO00267 1087 aaKnown RBP28.96■■■□□ 2.23
SKIV2L-207ENST00000471818 URB2Q14146 1524 aaKnown RBP28.89■■■□□ 2.22
SKIV2L-207ENST00000471818 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
SKIV2L-207ENST00000471818 TOPBP1Q92547 1522 aa28.72■■■□□ 2.19
SKIV2L-207ENST00000471818 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
SKIV2L-207ENST00000471818 DNAJC5Q9H3Z4 198 aa28.65■■■□□ 2.18
SKIV2L-207ENST00000471818 IFT140Q96RY7 1462 aa28.62■■■□□ 2.17
SKIV2L-207ENST00000471818 POLA1P09884 1462 aaPredicted RBP28.47■■■□□ 2.15
SKIV2L-207ENST00000471818 CUX1P39880 1505 aa28.44■■■□□ 2.14
SKIV2L-207ENST00000471818 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
SKIV2L-207ENST00000471818 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
SKIV2L-207ENST00000471818 FGD5Q6ZNL6 1462 aa28.36■■■□□ 2.13
SKIV2L-207ENST00000471818 SOGA1O94964 1423 aa28.35■■■□□ 2.13
SKIV2L-207ENST00000471818 WDR97A6NE52 1622 aa28.34■■■□□ 2.13
SKIV2L-207ENST00000471818 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
SKIV2L-207ENST00000471818 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
SKIV2L-207ENST00000471818 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.11
SKIV2L-207ENST00000471818 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
SKIV2L-207ENST00000471818 AQRO60306 1485 aaKnown RBP eCLIP28.21■■■□□ 2.112e-7■■□□□ 12.7
SKIV2L-207ENST00000471818 BIVM-ERCC5R4GMW8 1640 aa28.21■■■□□ 2.11
SKIV2L-207ENST00000471818 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
SKIV2L-207ENST00000471818 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
SKIV2L-207ENST00000471818 ABCA10Q8WWZ4 1543 aa28.15■■■□□ 2.1
SKIV2L-207ENST00000471818 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
SKIV2L-207ENST00000471818 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
SKIV2L-207ENST00000471818 GAPVD1Q14C86 1478 aa28.04■■■□□ 2.08
SKIV2L-207ENST00000471818 MAGI1Q96QZ7 1491 aaPredicted RBP28.04■■■□□ 2.08
SKIV2L-207ENST00000471818 ABCA5Q8WWZ7 1642 aa28.01■■■□□ 2.07
SKIV2L-207ENST00000471818 SNAPC4Q5SXM2 1469 aa27.99■■■□□ 2.07
SKIV2L-207ENST00000471818 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
SKIV2L-207ENST00000471818 CHD1O14646 1710 aa27.94■■■□□ 2.06
SKIV2L-207ENST00000471818 SYNJ2O15056 1496 aa27.91■■■□□ 2.06
SKIV2L-207ENST00000471818 FBLN2P98095 1184 aa27.87■■■□□ 2.05
SKIV2L-207ENST00000471818 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
SKIV2L-207ENST00000471818 ERICH3Q5RHP9 1530 aa27.84■■■□□ 2.05
SKIV2L-207ENST00000471818 ADAMTS12P58397 1594 aa27.75■■■□□ 2.03
SKIV2L-207ENST00000471818 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
SKIV2L-207ENST00000471818 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
SKIV2L-207ENST00000471818 KIF27Q86VH2 1401 aa27.7■■■□□ 2.03
SKIV2L-207ENST00000471818 ARHGEF11O15085 1522 aa27.7■■■□□ 2.02
SKIV2L-207ENST00000471818 GRIN2AQ12879 1464 aa27.69■■■□□ 2.02
SKIV2L-207ENST00000471818 RIMBP3CA6NJZ7 1639 aa27.68■■■□□ 2.02
SKIV2L-207ENST00000471818 RIMBP3BA6NNM3 1639 aa27.68■■■□□ 2.02
SKIV2L-207ENST00000471818 RIMBP3Q9UFD9 1639 aa27.68■■■□□ 2.02
SKIV2L-207ENST00000471818 NUP160Q12769 1436 aa27.6■■■□□ 2.01
SKIV2L-207ENST00000471818 IGF1RP08069 1367 aa27.57■■■□□ 2
SKIV2L-207ENST00000471818 CUL7Q14999 1698 aa27.55■■■□□ 2
SKIV2L-207ENST00000471818 TRIM41Q8WV44 630 aa27.52■■■□□ 2
SKIV2L-207ENST00000471818 CEP170Q5SW79 1584 aa27.51■■□□□ 1.99
SKIV2L-207ENST00000471818 ARAP1Q96P48 1450 aa27.45■■□□□ 1.99
SKIV2L-207ENST00000471818 CARMIL1Q5VZK9 1371 aa27.41■■□□□ 1.98
SKIV2L-207ENST00000471818 SHROOM2Q13796 1616 aa27.39■■□□□ 1.98
SKIV2L-207ENST00000471818 CYB5RLQ6IPT4 315 aa27.39■■□□□ 1.98
SKIV2L-207ENST00000471818 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
SKIV2L-207ENST00000471818 KIAA0586Q9BVV6 1533 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms