RNA–Protein interactions for RNA: ENST00000471789.1

PSMD5-205, Transcript of proteasome 26S subunit, non-ATPase 5, humanhuman

TSL 2

Gene PSMD5, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD5-205ENST00000471789 NISCHQ9Y2I1 1504 aa29.4■■■□□ 2.3
PSMD5-205ENST00000471789 ABCC9O60706 1549 aa26.61■■□□□ 1.85
PSMD5-205ENST00000471789 CCDC180Q9P1Z9 1646 aa26.43■■□□□ 1.82
PSMD5-205ENST00000471789 AEBP2Q6ZN18 517 aaPredicted RBP26.03■■□□□ 1.76
PSMD5-205ENST00000471789 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
PSMD5-205ENST00000471789 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
PSMD5-205ENST00000471789 NACADO15069 1562 aa25.01■■□□□ 1.59
PSMD5-205ENST00000471789 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
PSMD5-205ENST00000471789 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
PSMD5-205ENST00000471789 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
PSMD5-205ENST00000471789 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
PSMD5-205ENST00000471789 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
PSMD5-205ENST00000471789 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
PSMD5-205ENST00000471789 ZCCHC6Q5VYS8 1495 aaKnown RBP24.34■■□□□ 1.49
PSMD5-205ENST00000471789 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
PSMD5-205ENST00000471789 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
PSMD5-205ENST00000471789 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
PSMD5-205ENST00000471789 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
PSMD5-205ENST00000471789 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
PSMD5-205ENST00000471789 EIF4G1Q04637 1599 aaKnown RBP23.94■■□□□ 1.42
PSMD5-205ENST00000471789 DNAJC5Q9H3Z4 198 aa23.11■■□□□ 1.29
PSMD5-205ENST00000471789 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
PSMD5-205ENST00000471789 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
PSMD5-205ENST00000471789 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
PSMD5-205ENST00000471789 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
PSMD5-205ENST00000471789 CUX2O14529 1486 aa22.96■■□□□ 1.27
PSMD5-205ENST00000471789 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
PSMD5-205ENST00000471789 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
PSMD5-205ENST00000471789 NESP48681 1621 aa22.83■■□□□ 1.25
PSMD5-205ENST00000471789 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
PSMD5-205ENST00000471789 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
PSMD5-205ENST00000471789 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
PSMD5-205ENST00000471789 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
PSMD5-205ENST00000471789 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
PSMD5-205ENST00000471789 LAMC3Q9Y6N6 1575 aa22.6■■□□□ 1.21
PSMD5-205ENST00000471789 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
PSMD5-205ENST00000471789 PDS5BQ9NTI5 1447 aa22.46■■□□□ 1.19
PSMD5-205ENST00000471789 WIZO95785 1651 aa22.39■■□□□ 1.18
PSMD5-205ENST00000471789 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
PSMD5-205ENST00000471789 MRC2Q9UBG0 1479 aa22.31■■□□□ 1.16
PSMD5-205ENST00000471789 WDR62O43379 1518 aa22.26■■□□□ 1.15
PSMD5-205ENST00000471789 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
PSMD5-205ENST00000471789 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
PSMD5-205ENST00000471789 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.13
PSMD5-205ENST00000471789 CFTRP13569 1480 aa22.11■■□□□ 1.13
PSMD5-205ENST00000471789 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
PSMD5-205ENST00000471789 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
PSMD5-205ENST00000471789 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
PSMD5-205ENST00000471789 URB2Q14146 1524 aaKnown RBP22■■□□□ 1.11
PSMD5-205ENST00000471789 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
PSMD5-205ENST00000471789 PRDM2Q13029 1718 aa21.87■■□□□ 1.09
PSMD5-205ENST00000471789 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
PSMD5-205ENST00000471789 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.09
PSMD5-205ENST00000471789 ZNF608Q9ULD9 1512 aaPredicted RBP21.76■■□□□ 1.07
PSMD5-205ENST00000471789 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
PSMD5-205ENST00000471789 TOPBP1Q92547 1522 aa21.72■■□□□ 1.07
PSMD5-205ENST00000471789 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
PSMD5-205ENST00000471789 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
PSMD5-205ENST00000471789 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
PSMD5-205ENST00000471789 EIF4G3O43432 1585 aaKnown RBP21.63■■□□□ 1.05
PSMD5-205ENST00000471789 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
PSMD5-205ENST00000471789 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
PSMD5-205ENST00000471789 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
PSMD5-205ENST00000471789 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
PSMD5-205ENST00000471789 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.045e-9■■■■■ 49.1
PSMD5-205ENST00000471789 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
PSMD5-205ENST00000471789 CHD1O14646 1710 aa21.49■■□□□ 1.03
PSMD5-205ENST00000471789 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
PSMD5-205ENST00000471789 FBLN2P98095 1184 aa21.4■■□□□ 1.02
PSMD5-205ENST00000471789 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
PSMD5-205ENST00000471789 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
PSMD5-205ENST00000471789 SOGA1O94964 1423 aa21.37■■□□□ 1.01
PSMD5-205ENST00000471789 ARAP1Q96P48 1450 aa21.35■■□□□ 1.01
PSMD5-205ENST00000471789 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
PSMD5-205ENST00000471789 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
PSMD5-205ENST00000471789 CUX1P39880 1505 aa21.3■■□□□ 1
PSMD5-205ENST00000471789 WDR97A6NE52 1622 aa21.28■■□□□ 1
PSMD5-205ENST00000471789 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
PSMD5-205ENST00000471789 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
PSMD5-205ENST00000471789 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
PSMD5-205ENST00000471789 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
PSMD5-205ENST00000471789 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
PSMD5-205ENST00000471789 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
PSMD5-205ENST00000471789 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
PSMD5-205ENST00000471789 PBRM1Q86U86 1689 aa21.13■□□□□ 0.97
PSMD5-205ENST00000471789 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
PSMD5-205ENST00000471789 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
PSMD5-205ENST00000471789 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
PSMD5-205ENST00000471789 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
PSMD5-205ENST00000471789 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.94
PSMD5-205ENST00000471789 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
PSMD5-205ENST00000471789 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
PSMD5-205ENST00000471789 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
PSMD5-205ENST00000471789 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
PSMD5-205ENST00000471789 TOP2BQ02880 1626 aa20.91■□□□□ 0.94
PSMD5-205ENST00000471789 CEP170Q5SW79 1584 aa20.9■□□□□ 0.94
PSMD5-205ENST00000471789 NUP160Q12769 1436 aa20.88■□□□□ 0.93
PSMD5-205ENST00000471789 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
PSMD5-205ENST00000471789 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
PSMD5-205ENST00000471789 ERICH3Q5RHP9 1530 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms