RNA–Protein interactions for RNA: ENST00000471434.1

MRPL38-205, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 4

Gene MRPL38, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-205ENST00000471434 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
MRPL38-205ENST00000471434 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
MRPL38-205ENST00000471434 ABCC9O60706 1549 aa26.53■■□□□ 1.84
MRPL38-205ENST00000471434 RB1CC1Q8TDY2 1594 aa25.47■■□□□ 1.67
MRPL38-205ENST00000471434 NACADO15069 1562 aa25.35■■□□□ 1.65
MRPL38-205ENST00000471434 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
MRPL38-205ENST00000471434 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
MRPL38-205ENST00000471434 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
MRPL38-205ENST00000471434 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
MRPL38-205ENST00000471434 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
MRPL38-205ENST00000471434 BICRAQ9NZM4 1560 aa24.68■■□□□ 1.54
MRPL38-205ENST00000471434 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
MRPL38-205ENST00000471434 DNAJC5BQ9UF47 199 aa24.6■■□□□ 1.53
MRPL38-205ENST00000471434 SHROOM4Q9ULL8 1493 aa24.49■■□□□ 1.51
MRPL38-205ENST00000471434 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
MRPL38-205ENST00000471434 EIF4G1Q04637 1599 aaKnown RBP24.07■■□□□ 1.44
MRPL38-205ENST00000471434 CC2D2AQ9P2K1 1620 aa24.06■■□□□ 1.44
MRPL38-205ENST00000471434 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
MRPL38-205ENST00000471434 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
MRPL38-205ENST00000471434 NCAPD3P42695 1498 aa23.34■■□□□ 1.33
MRPL38-205ENST00000471434 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
MRPL38-205ENST00000471434 BAZ1AQ9NRL2 1556 aaPredicted RBP23.29■■□□□ 1.32
MRPL38-205ENST00000471434 ATAD2BQ9ULI0 1458 aa23.28■■□□□ 1.32
MRPL38-205ENST00000471434 HMGXB3Q12766 1538 aa23.26■■□□□ 1.31
MRPL38-205ENST00000471434 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
MRPL38-205ENST00000471434 BAZ1BQ9UIG0 1483 aaKnown RBP23.09■■□□□ 1.29
MRPL38-205ENST00000471434 MROH2BQ7Z745 1585 aa23.05■■□□□ 1.28
MRPL38-205ENST00000471434 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
MRPL38-205ENST00000471434 CUX2O14529 1486 aa22.89■■□□□ 1.25
MRPL38-205ENST00000471434 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
MRPL38-205ENST00000471434 NESP48681 1621 aa22.85■■□□□ 1.25
MRPL38-205ENST00000471434 WIZO95785 1651 aa22.81■■□□□ 1.24
MRPL38-205ENST00000471434 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
MRPL38-205ENST00000471434 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
MRPL38-205ENST00000471434 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
MRPL38-205ENST00000471434 PDS5BQ9NTI5 1447 aa22.64■■□□□ 1.21
MRPL38-205ENST00000471434 CADPSQ9ULU8 1353 aa22.61■■□□□ 1.21
MRPL38-205ENST00000471434 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.21
MRPL38-205ENST00000471434 DNAJC5Q9H3Z4 198 aa22.51■■□□□ 1.19
MRPL38-205ENST00000471434 MRC2Q9UBG0 1479 aa22.45■■□□□ 1.18
MRPL38-205ENST00000471434 WDR62O43379 1518 aa22.42■■□□□ 1.18
MRPL38-205ENST00000471434 CFTRP13569 1480 aa22.42■■□□□ 1.18
MRPL38-205ENST00000471434 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
MRPL38-205ENST00000471434 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
MRPL38-205ENST00000471434 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
MRPL38-205ENST00000471434 CCDC88BA6NC98 1476 aa22.24■■□□□ 1.15
MRPL38-205ENST00000471434 URB2Q14146 1524 aaKnown RBP22.17■■□□□ 1.14
MRPL38-205ENST00000471434 ABCC8Q09428 1581 aa22■■□□□ 1.11
MRPL38-205ENST00000471434 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
MRPL38-205ENST00000471434 DNMBPQ6XZF7 1577 aa21.96■■□□□ 1.11
MRPL38-205ENST00000471434 IFT140Q96RY7 1462 aa21.95■■□□□ 1.1
MRPL38-205ENST00000471434 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
MRPL38-205ENST00000471434 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
MRPL38-205ENST00000471434 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
MRPL38-205ENST00000471434 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
MRPL38-205ENST00000471434 POLA1P09884 1462 aaPredicted RBP21.76■■□□□ 1.07
MRPL38-205ENST00000471434 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
MRPL38-205ENST00000471434 CUX1P39880 1505 aa21.66■■□□□ 1.06
MRPL38-205ENST00000471434 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
MRPL38-205ENST00000471434 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
MRPL38-205ENST00000471434 CHD1O14646 1710 aa21.64■■□□□ 1.06
MRPL38-205ENST00000471434 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.057e-7■□□□□ 11.1
MRPL38-205ENST00000471434 SOGA1O94964 1423 aa21.63■■□□□ 1.05
MRPL38-205ENST00000471434 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
MRPL38-205ENST00000471434 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
MRPL38-205ENST00000471434 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
MRPL38-205ENST00000471434 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
MRPL38-205ENST00000471434 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
MRPL38-205ENST00000471434 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
MRPL38-205ENST00000471434 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
MRPL38-205ENST00000471434 MAGI1Q96QZ7 1491 aaPredicted RBP21.48■■□□□ 1.03
MRPL38-205ENST00000471434 ARHGEF11O15085 1522 aa21.48■■□□□ 1.03
MRPL38-205ENST00000471434 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
MRPL38-205ENST00000471434 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
MRPL38-205ENST00000471434 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
MRPL38-205ENST00000471434 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
MRPL38-205ENST00000471434 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
MRPL38-205ENST00000471434 TOP2BQ02880 1626 aa21.43■■□□□ 1.02
MRPL38-205ENST00000471434 GAPVD1Q14C86 1478 aa21.4■■□□□ 1.02
MRPL38-205ENST00000471434 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
MRPL38-205ENST00000471434 FBLN2P98095 1184 aa21.38■■□□□ 1.01
MRPL38-205ENST00000471434 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
MRPL38-205ENST00000471434 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
MRPL38-205ENST00000471434 CLASP1Q7Z460 1538 aa21.37■■□□□ 1.01
MRPL38-205ENST00000471434 CHMP7Q8WUX9 453 aaPredicted RBP21.31■■□□□ 1
MRPL38-205ENST00000471434 ARAP1Q96P48 1450 aa21.27■■□□□ 1
MRPL38-205ENST00000471434 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
MRPL38-205ENST00000471434 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
MRPL38-205ENST00000471434 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
MRPL38-205ENST00000471434 CYB5RLQ6IPT4 315 aa21.17■□□□□ 0.98
MRPL38-205ENST00000471434 FHAD1B1AJZ9 1412 aa21.15■□□□□ 0.98
MRPL38-205ENST00000471434 NUP160Q12769 1436 aa21.12■□□□□ 0.97
MRPL38-205ENST00000471434 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
MRPL38-205ENST00000471434 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
MRPL38-205ENST00000471434 CUL7Q14999 1698 aa20.99■□□□□ 0.95
MRPL38-205ENST00000471434 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
MRPL38-205ENST00000471434 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
MRPL38-205ENST00000471434 RUSC2Q8N2Y8 1516 aa20.95■□□□□ 0.94
MRPL38-205ENST00000471434 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
MRPL38-205ENST00000471434 IGF1RP08069 1367 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms