RNA–Protein interactions for RNA: ENST00000471410.5

TSPAN7-204, Transcript of tetraspanin 7, humanhuman

TSL 2

Gene TSPAN7, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN7-204ENST00000471410 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
TSPAN7-204ENST00000471410 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
TSPAN7-204ENST00000471410 ABCC9O60706 1549 aa26.93■■□□□ 1.9
TSPAN7-204ENST00000471410 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
TSPAN7-204ENST00000471410 NACADO15069 1562 aa25.79■■□□□ 1.72
TSPAN7-204ENST00000471410 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
TSPAN7-204ENST00000471410 DCAF8L2P0C7V8 631 aa25.61■■□□□ 1.69
TSPAN7-204ENST00000471410 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
TSPAN7-204ENST00000471410 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
TSPAN7-204ENST00000471410 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.66
TSPAN7-204ENST00000471410 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
TSPAN7-204ENST00000471410 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
TSPAN7-204ENST00000471410 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
TSPAN7-204ENST00000471410 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.57
TSPAN7-204ENST00000471410 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
TSPAN7-204ENST00000471410 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
TSPAN7-204ENST00000471410 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
TSPAN7-204ENST00000471410 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
TSPAN7-204ENST00000471410 SMARCA4P51532 1647 aa23.96■■□□□ 1.43
TSPAN7-204ENST00000471410 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
TSPAN7-204ENST00000471410 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
TSPAN7-204ENST00000471410 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
TSPAN7-204ENST00000471410 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
TSPAN7-204ENST00000471410 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
TSPAN7-204ENST00000471410 PEG3Q9GZU2 1588 aa23.72■■□□□ 1.39
TSPAN7-204ENST00000471410 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
TSPAN7-204ENST00000471410 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
TSPAN7-204ENST00000471410 WIZO95785 1651 aa23.54■■□□□ 1.36
TSPAN7-204ENST00000471410 RSF1Q96T23 1441 aaPredicted RBP23.4■■□□□ 1.34
TSPAN7-204ENST00000471410 NESP48681 1621 aa23.32■■□□□ 1.32
TSPAN7-204ENST00000471410 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
TSPAN7-204ENST00000471410 LAMC3Q9Y6N6 1575 aa23.2■■□□□ 1.3
TSPAN7-204ENST00000471410 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
TSPAN7-204ENST00000471410 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
TSPAN7-204ENST00000471410 KIF21AQ7Z4S6 1674 aa23.1■■□□□ 1.29
TSPAN7-204ENST00000471410 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
TSPAN7-204ENST00000471410 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
TSPAN7-204ENST00000471410 CUX2O14529 1486 aa22.98■■□□□ 1.27
TSPAN7-204ENST00000471410 PDS5BQ9NTI5 1447 aa22.96■■□□□ 1.27
TSPAN7-204ENST00000471410 CFTRP13569 1480 aa22.94■■□□□ 1.26
TSPAN7-204ENST00000471410 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
TSPAN7-204ENST00000471410 PRDM2Q13029 1718 aa22.89■■□□□ 1.26
TSPAN7-204ENST00000471410 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
TSPAN7-204ENST00000471410 MRC2Q9UBG0 1479 aa22.8■■□□□ 1.24
TSPAN7-204ENST00000471410 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
TSPAN7-204ENST00000471410 WDR62O43379 1518 aa22.78■■□□□ 1.24
TSPAN7-204ENST00000471410 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
TSPAN7-204ENST00000471410 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
TSPAN7-204ENST00000471410 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
TSPAN7-204ENST00000471410 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
TSPAN7-204ENST00000471410 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
TSPAN7-204ENST00000471410 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
TSPAN7-204ENST00000471410 DNAJC5Q9H3Z4 198 aa22.36■■□□□ 1.17
TSPAN7-204ENST00000471410 IFT140Q96RY7 1462 aa22.31■■□□□ 1.16
TSPAN7-204ENST00000471410 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
TSPAN7-204ENST00000471410 CUX1P39880 1505 aa22.3■■□□□ 1.16
TSPAN7-204ENST00000471410 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
TSPAN7-204ENST00000471410 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
TSPAN7-204ENST00000471410 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
TSPAN7-204ENST00000471410 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
TSPAN7-204ENST00000471410 RAD54L2Q9Y4B4 1467 aa22.19■■□□□ 1.14
TSPAN7-204ENST00000471410 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
TSPAN7-204ENST00000471410 SOGA1O94964 1423 aa22.12■■□□□ 1.13
TSPAN7-204ENST00000471410 BIVM-ERCC5R4GMW8 1640 aa22.11■■□□□ 1.13
TSPAN7-204ENST00000471410 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.13
TSPAN7-204ENST00000471410 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
TSPAN7-204ENST00000471410 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
TSPAN7-204ENST00000471410 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
TSPAN7-204ENST00000471410 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
TSPAN7-204ENST00000471410 CHD1O14646 1710 aa22.01■■□□□ 1.11
TSPAN7-204ENST00000471410 ABCA10Q8WWZ4 1543 aa21.98■■□□□ 1.11
TSPAN7-204ENST00000471410 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
TSPAN7-204ENST00000471410 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
TSPAN7-204ENST00000471410 SNAPC4Q5SXM2 1469 aa21.92■■□□□ 1.1
TSPAN7-204ENST00000471410 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
TSPAN7-204ENST00000471410 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
TSPAN7-204ENST00000471410 GAPVD1Q14C86 1478 aa21.89■■□□□ 1.09
TSPAN7-204ENST00000471410 MAGI1Q96QZ7 1491 aaPredicted RBP21.85■■□□□ 1.09
TSPAN7-204ENST00000471410 SYNJ2O15056 1496 aa21.77■■□□□ 1.07
TSPAN7-204ENST00000471410 RIMBP3CA6NJZ7 1639 aa21.76■■□□□ 1.07
TSPAN7-204ENST00000471410 RIMBP3BA6NNM3 1639 aa21.76■■□□□ 1.07
TSPAN7-204ENST00000471410 RIMBP3Q9UFD9 1639 aa21.76■■□□□ 1.07
TSPAN7-204ENST00000471410 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
TSPAN7-204ENST00000471410 FBLN2P98095 1184 aa21.75■■□□□ 1.07
TSPAN7-204ENST00000471410 CLASP1Q7Z460 1538 aa21.73■■□□□ 1.07
TSPAN7-204ENST00000471410 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.07
TSPAN7-204ENST00000471410 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
TSPAN7-204ENST00000471410 CHMP7Q8WUX9 453 aaPredicted RBP21.67■■□□□ 1.06
TSPAN7-204ENST00000471410 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
TSPAN7-204ENST00000471410 FHAD1B1AJZ9 1412 aa21.62■■□□□ 1.05
TSPAN7-204ENST00000471410 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
TSPAN7-204ENST00000471410 NUP160Q12769 1436 aa21.55■■□□□ 1.04
TSPAN7-204ENST00000471410 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
TSPAN7-204ENST00000471410 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
TSPAN7-204ENST00000471410 ARAP1Q96P48 1450 aa21.53■■□□□ 1.04
TSPAN7-204ENST00000471410 CUL7Q14999 1698 aa21.52■■□□□ 1.04
TSPAN7-204ENST00000471410 IGF1RP08069 1367 aa21.5■■□□□ 1.03
TSPAN7-204ENST00000471410 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
TSPAN7-204ENST00000471410 ERCC6L2Q5T890 1561 aa21.45■■□□□ 1.02
TSPAN7-204ENST00000471410 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 282.7 ms