RNA–Protein interactions for RNA: ENST00000471290.1

RPL3-213, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 481 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-213ENST00000471290 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.08
RPL3-213ENST00000471290 ABCC9O60706 1549 aa25.92■■□□□ 1.74
RPL3-213ENST00000471290 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
RPL3-213ENST00000471290 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
RPL3-213ENST00000471290 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
RPL3-213ENST00000471290 NACADO15069 1562 aa24.17■■□□□ 1.46
RPL3-213ENST00000471290 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
RPL3-213ENST00000471290 UNC13AQ9UPW8 1703 aa23.85■■□□□ 1.41
RPL3-213ENST00000471290 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
RPL3-213ENST00000471290 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
RPL3-213ENST00000471290 MYO15BQ96JP2 1530 aa23.71■■□□□ 1.39
RPL3-213ENST00000471290 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
RPL3-213ENST00000471290 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
RPL3-213ENST00000471290 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
RPL3-213ENST00000471290 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
RPL3-213ENST00000471290 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
RPL3-213ENST00000471290 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
RPL3-213ENST00000471290 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
RPL3-213ENST00000471290 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
RPL3-213ENST00000471290 CUX2O14529 1486 aa22.6■■□□□ 1.21
RPL3-213ENST00000471290 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
RPL3-213ENST00000471290 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
RPL3-213ENST00000471290 ATAD2BQ9ULI0 1458 aa22.18■■□□□ 1.14
RPL3-213ENST00000471290 NESP48681 1621 aa22.12■■□□□ 1.13
RPL3-213ENST00000471290 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
RPL3-213ENST00000471290 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
RPL3-213ENST00000471290 THOC2Q8NI27 1593 aaKnown RBP22.01■■□□□ 1.11
RPL3-213ENST00000471290 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
RPL3-213ENST00000471290 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
RPL3-213ENST00000471290 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
RPL3-213ENST00000471290 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.09
RPL3-213ENST00000471290 PEG3Q9GZU2 1588 aa21.83■■□□□ 1.09
RPL3-213ENST00000471290 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
RPL3-213ENST00000471290 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
RPL3-213ENST00000471290 KIF21AQ7Z4S6 1674 aa21.78■■□□□ 1.08
RPL3-213ENST00000471290 MRC2Q9UBG0 1479 aa21.63■■□□□ 1.05
RPL3-213ENST00000471290 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
RPL3-213ENST00000471290 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
RPL3-213ENST00000471290 WDR62O43379 1518 aa21.6■■□□□ 1.05
RPL3-213ENST00000471290 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
RPL3-213ENST00000471290 CEP164Q9UPV0 1460 aa21.42■■□□□ 1.02
RPL3-213ENST00000471290 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
RPL3-213ENST00000471290 WIZO95785 1651 aa21.3■■□□□ 1
RPL3-213ENST00000471290 CFTRP13569 1480 aa21.27■■□□□ 1
RPL3-213ENST00000471290 RIMBP3CA6NJZ7 1639 aa21.22■□□□□ 0.99
RPL3-213ENST00000471290 RIMBP3BA6NNM3 1639 aa21.22■□□□□ 0.99
RPL3-213ENST00000471290 RIMBP3Q9UFD9 1639 aa21.22■□□□□ 0.99
RPL3-213ENST00000471290 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
RPL3-213ENST00000471290 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
RPL3-213ENST00000471290 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
RPL3-213ENST00000471290 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
RPL3-213ENST00000471290 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
RPL3-213ENST00000471290 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
RPL3-213ENST00000471290 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
RPL3-213ENST00000471290 PRDM2Q13029 1718 aa20.93■□□□□ 0.94
RPL3-213ENST00000471290 TOPBP1Q92547 1522 aa20.89■□□□□ 0.94
RPL3-213ENST00000471290 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
RPL3-213ENST00000471290 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
RPL3-213ENST00000471290 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
RPL3-213ENST00000471290 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
RPL3-213ENST00000471290 CHD1O14646 1710 aa20.8■□□□□ 0.92
RPL3-213ENST00000471290 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
RPL3-213ENST00000471290 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.927e-12■■■■■ 79.4
RPL3-213ENST00000471290 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
RPL3-213ENST00000471290 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
RPL3-213ENST00000471290 FBLN2P98095 1184 aa20.7■□□□□ 0.9
RPL3-213ENST00000471290 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
RPL3-213ENST00000471290 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
RPL3-213ENST00000471290 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
RPL3-213ENST00000471290 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
RPL3-213ENST00000471290 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
RPL3-213ENST00000471290 SNAPC4Q5SXM2 1469 aa20.55■□□□□ 0.88
RPL3-213ENST00000471290 SOGA1O94964 1423 aa20.54■□□□□ 0.88
RPL3-213ENST00000471290 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
RPL3-213ENST00000471290 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
RPL3-213ENST00000471290 CHMP7Q8WUX9 453 aaPredicted RBP20.49■□□□□ 0.87
RPL3-213ENST00000471290 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
RPL3-213ENST00000471290 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
RPL3-213ENST00000471290 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
RPL3-213ENST00000471290 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
RPL3-213ENST00000471290 GAPVD1Q14C86 1478 aa20.42■□□□□ 0.86
RPL3-213ENST00000471290 CUX1P39880 1505 aa20.33■□□□□ 0.85
RPL3-213ENST00000471290 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
RPL3-213ENST00000471290 ERCC6L2Q5T890 1561 aa20.23■□□□□ 0.83
RPL3-213ENST00000471290 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
RPL3-213ENST00000471290 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
RPL3-213ENST00000471290 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
RPL3-213ENST00000471290 CEP170Q5SW79 1584 aa20.15■□□□□ 0.82
RPL3-213ENST00000471290 NUP160Q12769 1436 aa20.14■□□□□ 0.81
RPL3-213ENST00000471290 SHROOM2Q13796 1616 aa20.09■□□□□ 0.81
RPL3-213ENST00000471290 KIF13AQ9H1H9 1805 aa20.09■□□□□ 0.81
RPL3-213ENST00000471290 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
RPL3-213ENST00000471290 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.79
RPL3-213ENST00000471290 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
RPL3-213ENST00000471290 ABCC10Q5T3U5 1492 aa19.97■□□□□ 0.79
RPL3-213ENST00000471290 PRG4Q92954 1404 aaPredicted RBP19.96■□□□□ 0.79
RPL3-213ENST00000471290 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.78
RPL3-213ENST00000471290 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
RPL3-213ENST00000471290 KDM4FA0A1W2PPD8 638 aa19.92■□□□□ 0.78
RPL3-213ENST00000471290 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms