RNA–Protein interactions for RNA: ENST00000471276.5

TMEM198B-201, Transcript of transmembrane protein 198B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene TMEM198B, Length 1,958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM198B-201ENST00000471276 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
TMEM198B-201ENST00000471276 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
TMEM198B-201ENST00000471276 ABCC9O60706 1549 aa30.24■■■□□ 2.43
TMEM198B-201ENST00000471276 ZCCHC6Q5VYS8 1495 aaKnown RBP29.91■■■□□ 2.38
TMEM198B-201ENST00000471276 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
TMEM198B-201ENST00000471276 DCAF1Q9Y4B6 1507 aa29.48■■■□□ 2.31
TMEM198B-201ENST00000471276 NACADO15069 1562 aa29.34■■■□□ 2.29
TMEM198B-201ENST00000471276 MYO15BQ96JP2 1530 aa29.31■■■□□ 2.28
TMEM198B-201ENST00000471276 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
TMEM198B-201ENST00000471276 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
TMEM198B-201ENST00000471276 SCRIBQ14160 1630 aa28.85■■■□□ 2.21
TMEM198B-201ENST00000471276 UNC13AQ9UPW8 1703 aa28.64■■■□□ 2.18
TMEM198B-201ENST00000471276 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
TMEM198B-201ENST00000471276 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
TMEM198B-201ENST00000471276 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
TMEM198B-201ENST00000471276 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
TMEM198B-201ENST00000471276 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
TMEM198B-201ENST00000471276 EIF4G1Q04637 1599 aaKnown RBP27.58■■■□□ 2.01
TMEM198B-201ENST00000471276 SMARCA4P51532 1647 aa27.58■■■□□ 2
TMEM198B-201ENST00000471276 RSF1Q96T23 1441 aaPredicted RBP27.54■■■□□ 2
TMEM198B-201ENST00000471276 SUPT5HO00267 1087 aaKnown RBP27.5■■□□□ 1.99
TMEM198B-201ENST00000471276 WIZO95785 1651 aa27.37■■□□□ 1.97
TMEM198B-201ENST00000471276 CC2D2AQ9P2K1 1620 aa27.32■■□□□ 1.96
TMEM198B-201ENST00000471276 ATAD2BQ9ULI0 1458 aa27.28■■□□□ 1.96
TMEM198B-201ENST00000471276 PEG3Q9GZU2 1588 aa27.23■■□□□ 1.95
TMEM198B-201ENST00000471276 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
TMEM198B-201ENST00000471276 SMARCA2P51531 1590 aa27.2■■□□□ 1.94
TMEM198B-201ENST00000471276 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
TMEM198B-201ENST00000471276 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.93
TMEM198B-201ENST00000471276 TOP2AP11388 1531 aaKnown RBP27.03■■□□□ 1.92
TMEM198B-201ENST00000471276 HMGXB3Q12766 1538 aa27■■□□□ 1.91
TMEM198B-201ENST00000471276 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
TMEM198B-201ENST00000471276 NESP48681 1621 aa26.4■■□□□ 1.82
TMEM198B-201ENST00000471276 CADPSQ9ULU8 1353 aa26.39■■□□□ 1.82
TMEM198B-201ENST00000471276 CFTRP13569 1480 aa26.36■■□□□ 1.81
TMEM198B-201ENST00000471276 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
TMEM198B-201ENST00000471276 PRDM2Q13029 1718 aa26.13■■□□□ 1.77
TMEM198B-201ENST00000471276 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
TMEM198B-201ENST00000471276 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
TMEM198B-201ENST00000471276 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
TMEM198B-201ENST00000471276 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
TMEM198B-201ENST00000471276 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
TMEM198B-201ENST00000471276 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
TMEM198B-201ENST00000471276 ERCC6Q03468 1493 aa25.95■■□□□ 1.74
TMEM198B-201ENST00000471276 WRNQ14191 1432 aaPredicted RBP eCLIP25.92■■□□□ 1.74
TMEM198B-201ENST00000471276 CUX1P39880 1505 aa25.86■■□□□ 1.73
TMEM198B-201ENST00000471276 SYNJ1O43426 1573 aa25.86■■□□□ 1.73
TMEM198B-201ENST00000471276 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
TMEM198B-201ENST00000471276 URB2Q14146 1524 aaKnown RBP25.83■■□□□ 1.73
TMEM198B-201ENST00000471276 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
TMEM198B-201ENST00000471276 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
TMEM198B-201ENST00000471276 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
TMEM198B-201ENST00000471276 DNMBPQ6XZF7 1577 aa25.75■■□□□ 1.71
TMEM198B-201ENST00000471276 THOC2Q8NI27 1593 aaKnown RBP25.73■■□□□ 1.71
TMEM198B-201ENST00000471276 BIVM-ERCC5R4GMW8 1640 aa25.72■■□□□ 1.71
TMEM198B-201ENST00000471276 WDR62O43379 1518 aa25.67■■□□□ 1.7
TMEM198B-201ENST00000471276 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
TMEM198B-201ENST00000471276 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
TMEM198B-201ENST00000471276 RAD54L2Q9Y4B4 1467 aa25.56■■□□□ 1.68
TMEM198B-201ENST00000471276 SOGA1O94964 1423 aa25.51■■□□□ 1.67
TMEM198B-201ENST00000471276 CUX2O14529 1486 aa25.51■■□□□ 1.67
TMEM198B-201ENST00000471276 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
TMEM198B-201ENST00000471276 FAM9AQ8IZU1 332 aaPredicted RBP25.44■■□□□ 1.66
TMEM198B-201ENST00000471276 TARBP1Q13395 1621 aaKnown RBP25.41■■□□□ 1.66
TMEM198B-201ENST00000471276 IFT140Q96RY7 1462 aa25.39■■□□□ 1.65
TMEM198B-201ENST00000471276 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
TMEM198B-201ENST00000471276 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
TMEM198B-201ENST00000471276 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
TMEM198B-201ENST00000471276 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
TMEM198B-201ENST00000471276 KIF27Q86VH2 1401 aa25.3■■□□□ 1.64
TMEM198B-201ENST00000471276 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
TMEM198B-201ENST00000471276 ABCA5Q8WWZ7 1642 aa25.22■■□□□ 1.63
TMEM198B-201ENST00000471276 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
TMEM198B-201ENST00000471276 CSRNP3Q8WYN3 585 aa25.2■■□□□ 1.62
TMEM198B-201ENST00000471276 EEA1Q15075 1411 aa25.2■■□□□ 1.62
TMEM198B-201ENST00000471276 EIF4G3O43432 1585 aaKnown RBP25.19■■□□□ 1.62
TMEM198B-201ENST00000471276 IGF1RP08069 1367 aa25.17■■□□□ 1.62
TMEM198B-201ENST00000471276 EHMT2Q96KQ7 1210 aa25.15■■□□□ 1.62
TMEM198B-201ENST00000471276 PBRM1Q86U86 1689 aa25.09■■□□□ 1.61
TMEM198B-201ENST00000471276 GRIN2BQ13224 1484 aa25.08■■□□□ 1.61
TMEM198B-201ENST00000471276 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
TMEM198B-201ENST00000471276 LOC105371045A0A1W2PR82 267 aa25.05■■□□□ 1.6
TMEM198B-201ENST00000471276 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
TMEM198B-201ENST00000471276 CARMIL1Q5VZK9 1371 aa25.02■■□□□ 1.6
TMEM198B-201ENST00000471276 PRXQ9BXM0 1461 aa25.01■■□□□ 1.59
TMEM198B-201ENST00000471276 RAPGEF2Q9Y4G8 1499 aa24.97■■□□□ 1.59
TMEM198B-201ENST00000471276 CUL7Q14999 1698 aa24.95■■□□□ 1.58
TMEM198B-201ENST00000471276 ADAMTS12P58397 1594 aa24.94■■□□□ 1.58
TMEM198B-201ENST00000471276 KIF21BO75037 1637 aa24.93■■□□□ 1.58
TMEM198B-201ENST00000471276 FHAD1B1AJZ9 1412 aa24.92■■□□□ 1.58
TMEM198B-201ENST00000471276 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
TMEM198B-201ENST00000471276 FBLN2P98095 1184 aa24.89■■□□□ 1.57
TMEM198B-201ENST00000471276 GOLGA3Q08378 1498 aa24.88■■□□□ 1.57
TMEM198B-201ENST00000471276 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
TMEM198B-201ENST00000471276 SYNJ2O15056 1496 aa24.84■■□□□ 1.57
TMEM198B-201ENST00000471276 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
TMEM198B-201ENST00000471276 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
TMEM198B-201ENST00000471276 CHD1O14646 1710 aa24.74■■□□□ 1.55
TMEM198B-201ENST00000471276 TNIKQ9UKE5 1360 aa24.7■■□□□ 1.54
TMEM198B-201ENST00000471276 RANGAP1P46060 587 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms