RNA–Protein interactions for RNA: ENST00000471027.1

SCG5-204, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-204ENST00000471027 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
SCG5-204ENST00000471027 CCDC180Q9P1Z9 1646 aa19.64■□□□□ 0.73
SCG5-204ENST00000471027 ABCC9O60706 1549 aa19.54■□□□□ 0.72
SCG5-204ENST00000471027 RB1CC1Q8TDY2 1594 aa18.73■□□□□ 0.59
SCG5-204ENST00000471027 NACADO15069 1562 aa18.64■□□□□ 0.58
SCG5-204ENST00000471027 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
SCG5-204ENST00000471027 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
SCG5-204ENST00000471027 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
SCG5-204ENST00000471027 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
SCG5-204ENST00000471027 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
SCG5-204ENST00000471027 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
SCG5-204ENST00000471027 SHROOM4Q9ULL8 1493 aa18.06■□□□□ 0.48
SCG5-204ENST00000471027 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
SCG5-204ENST00000471027 UNC13AQ9UPW8 1703 aa17.99■□□□□ 0.47
SCG5-204ENST00000471027 SCRIBQ14160 1630 aa17.81■□□□□ 0.44
SCG5-204ENST00000471027 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
SCG5-204ENST00000471027 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
SCG5-204ENST00000471027 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
SCG5-204ENST00000471027 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
SCG5-204ENST00000471027 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
SCG5-204ENST00000471027 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
SCG5-204ENST00000471027 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
SCG5-204ENST00000471027 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
SCG5-204ENST00000471027 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
SCG5-204ENST00000471027 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
SCG5-204ENST00000471027 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
SCG5-204ENST00000471027 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
SCG5-204ENST00000471027 CUX2O14529 1486 aa16.94■□□□□ 0.3
SCG5-204ENST00000471027 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
SCG5-204ENST00000471027 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.28
SCG5-204ENST00000471027 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
SCG5-204ENST00000471027 LAMC3Q9Y6N6 1575 aa16.79■□□□□ 0.28
SCG5-204ENST00000471027 NESP48681 1621 aa16.73■□□□□ 0.27
SCG5-204ENST00000471027 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
SCG5-204ENST00000471027 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
SCG5-204ENST00000471027 WIZO95785 1651 aa16.56■□□□□ 0.24
SCG5-204ENST00000471027 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
SCG5-204ENST00000471027 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
SCG5-204ENST00000471027 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
SCG5-204ENST00000471027 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
SCG5-204ENST00000471027 CFTRP13569 1480 aa16.49■□□□□ 0.23
SCG5-204ENST00000471027 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
SCG5-204ENST00000471027 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
SCG5-204ENST00000471027 WDR62O43379 1518 aa16.44■□□□□ 0.22
SCG5-204ENST00000471027 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
SCG5-204ENST00000471027 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
SCG5-204ENST00000471027 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
SCG5-204ENST00000471027 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
SCG5-204ENST00000471027 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
SCG5-204ENST00000471027 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
SCG5-204ENST00000471027 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
SCG5-204ENST00000471027 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
SCG5-204ENST00000471027 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
SCG5-204ENST00000471027 ZNF608Q9ULD9 1512 aaPredicted RBP16■□□□□ 0.15
SCG5-204ENST00000471027 SOGA1O94964 1423 aa15.97■□□□□ 0.15
SCG5-204ENST00000471027 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.14
SCG5-204ENST00000471027 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
SCG5-204ENST00000471027 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
SCG5-204ENST00000471027 AQRO60306 1485 aaKnown RBP eCLIP15.92■□□□□ 0.14
SCG5-204ENST00000471027 FBLN2P98095 1184 aa15.92■□□□□ 0.14
SCG5-204ENST00000471027 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
SCG5-204ENST00000471027 TARBP1Q13395 1621 aaKnown RBP15.91■□□□□ 0.14
SCG5-204ENST00000471027 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
SCG5-204ENST00000471027 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
SCG5-204ENST00000471027 FGD5Q6ZNL6 1462 aa15.86■□□□□ 0.13
SCG5-204ENST00000471027 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
SCG5-204ENST00000471027 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
SCG5-204ENST00000471027 MAGI1Q96QZ7 1491 aaPredicted RBP15.84■□□□□ 0.13
SCG5-204ENST00000471027 ARHGEF11O15085 1522 aa15.82■□□□□ 0.12
SCG5-204ENST00000471027 CUX1P39880 1505 aa15.82■□□□□ 0.12
SCG5-204ENST00000471027 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
SCG5-204ENST00000471027 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
SCG5-204ENST00000471027 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
SCG5-204ENST00000471027 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
SCG5-204ENST00000471027 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
SCG5-204ENST00000471027 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.11
SCG5-204ENST00000471027 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
SCG5-204ENST00000471027 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
SCG5-204ENST00000471027 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
SCG5-204ENST00000471027 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
SCG5-204ENST00000471027 CHD1O14646 1710 aa15.71■□□□□ 0.1
SCG5-204ENST00000471027 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
SCG5-204ENST00000471027 ARAP1Q96P48 1450 aa15.64■□□□□ 0.09
SCG5-204ENST00000471027 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
SCG5-204ENST00000471027 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
SCG5-204ENST00000471027 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
SCG5-204ENST00000471027 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
SCG5-204ENST00000471027 BIVM-ERCC5R4GMW8 1640 aa15.58■□□□□ 0.09
SCG5-204ENST00000471027 GRIN2AQ12879 1464 aa15.58■□□□□ 0.08
SCG5-204ENST00000471027 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
SCG5-204ENST00000471027 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
SCG5-204ENST00000471027 NUP160Q12769 1436 aa15.52■□□□□ 0.08
SCG5-204ENST00000471027 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
SCG5-204ENST00000471027 KIF27Q86VH2 1401 aa15.47■□□□□ 0.07
SCG5-204ENST00000471027 JPH4Q96JJ6 628 aa15.45■□□□□ 0.06
SCG5-204ENST00000471027 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
SCG5-204ENST00000471027 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
SCG5-204ENST00000471027 PRG4Q92954 1404 aaPredicted RBP15.39■□□□□ 0.05
SCG5-204ENST00000471027 IGF1RP08069 1367 aa15.38■□□□□ 0.05
SCG5-204ENST00000471027 SHROOM2Q13796 1616 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms