RNA–Protein interactions for RNA: ENST00000470965.1

HDAC10-208, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-208ENST00000470965 NISCHQ9Y2I1 1504 aa48.18■■■■■ 5.3
HDAC10-208ENST00000470965 CCDC180Q9P1Z9 1646 aa42.79■■■■■ 4.44
HDAC10-208ENST00000470965 ABCC9O60706 1549 aa41.68■■■■■ 4.26
HDAC10-208ENST00000470965 NACADO15069 1562 aa40.23■■■■■ 4.03
HDAC10-208ENST00000470965 RB1CC1Q8TDY2 1594 aa40.23■■■■■ 4.03
HDAC10-208ENST00000470965 ZCCHC6Q5VYS8 1495 aaKnown RBP40.17■■■■■ 4.02
HDAC10-208ENST00000470965 DCAF8L2P0C7V8 631 aa40.13■■■■■ 4.01
HDAC10-208ENST00000470965 MYO15BQ96JP2 1530 aa40.11■■■■■ 4.01
HDAC10-208ENST00000470965 DCAF1Q9Y4B6 1507 aa39.95■■■■□ 3.99
HDAC10-208ENST00000470965 UNC13AQ9UPW8 1703 aa39.15■■■■□ 3.86
HDAC10-208ENST00000470965 SCRIBQ14160 1630 aa38.96■■■■□ 3.83
HDAC10-208ENST00000470965 PABPN1Q86U42 306 aaKnown RBP eCLIP38.95■■■■□ 3.83
HDAC10-208ENST00000470965 BICRAQ9NZM4 1560 aa38.94■■■■□ 3.82
HDAC10-208ENST00000470965 SHROOM4Q9ULL8 1493 aa38.72■■■■□ 3.79
HDAC10-208ENST00000470965 DNAJC5BQ9UF47 199 aa38.11■■■■□ 3.69
HDAC10-208ENST00000470965 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
HDAC10-208ENST00000470965 CC2D2AQ9P2K1 1620 aa37.72■■■■□ 3.63
HDAC10-208ENST00000470965 CECR2Q9BXF3 1484 aa37.49■■■■□ 3.59
HDAC10-208ENST00000470965 BAZ1AQ9NRL2 1556 aaPredicted RBP37.36■■■■□ 3.57
HDAC10-208ENST00000470965 SMARCA4P51532 1647 aa37.32■■■■□ 3.57
HDAC10-208ENST00000470965 NCAPD3P42695 1498 aa37.13■■■■□ 3.54
HDAC10-208ENST00000470965 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.54
HDAC10-208ENST00000470965 SMARCA2P51531 1590 aa37.12■■■■□ 3.53
HDAC10-208ENST00000470965 MROH2BQ7Z745 1585 aa37.08■■■■□ 3.53
HDAC10-208ENST00000470965 PEG3Q9GZU2 1588 aa37.03■■■■□ 3.52
HDAC10-208ENST00000470965 HMGXB3Q12766 1538 aa36.95■■■■□ 3.51
HDAC10-208ENST00000470965 BAZ1BQ9UIG0 1483 aaKnown RBP36.83■■■■□ 3.49
HDAC10-208ENST00000470965 RSF1Q96T23 1441 aaPredicted RBP36.74■■■■□ 3.47
HDAC10-208ENST00000470965 WIZO95785 1651 aa36.64■■■■□ 3.46
HDAC10-208ENST00000470965 TOP2AP11388 1531 aaKnown RBP36.36■■■■□ 3.41
HDAC10-208ENST00000470965 LAMC3Q9Y6N6 1575 aa36.11■■■■□ 3.37
HDAC10-208ENST00000470965 NESP48681 1621 aa36.08■■■■□ 3.37
HDAC10-208ENST00000470965 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
HDAC10-208ENST00000470965 ERCC6Q03468 1493 aa35.97■■■■□ 3.35
HDAC10-208ENST00000470965 PDS5BQ9NTI5 1447 aa35.91■■■■□ 3.34
HDAC10-208ENST00000470965 CCDC88BA6NC98 1476 aa35.9■■■■□ 3.34
HDAC10-208ENST00000470965 CFTRP13569 1480 aa35.86■■■■□ 3.33
HDAC10-208ENST00000470965 SUPT5HO00267 1087 aaKnown RBP35.84■■■■□ 3.33
HDAC10-208ENST00000470965 KIF21AQ7Z4S6 1674 aa35.62■■■■□ 3.29
HDAC10-208ENST00000470965 CUX2O14529 1486 aa35.6■■■■□ 3.29
HDAC10-208ENST00000470965 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
HDAC10-208ENST00000470965 CEP164Q9UPV0 1460 aa35.55■■■■□ 3.28
HDAC10-208ENST00000470965 THOC2Q8NI27 1593 aaKnown RBP35.55■■■■□ 3.28
HDAC10-208ENST00000470965 PRDM2Q13029 1718 aa35.49■■■■□ 3.27
HDAC10-208ENST00000470965 MRC2Q9UBG0 1479 aa35.48■■■■□ 3.27
HDAC10-208ENST00000470965 WDR62O43379 1518 aa35.36■■■■□ 3.25
HDAC10-208ENST00000470965 URB2Q14146 1524 aaKnown RBP35.2■■■■□ 3.23
HDAC10-208ENST00000470965 ABCC8Q09428 1581 aa35.13■■■■□ 3.21
HDAC10-208ENST00000470965 TOPBP1Q92547 1522 aa35.04■■■■□ 3.2
HDAC10-208ENST00000470965 DNMBPQ6XZF7 1577 aa35.01■■■■□ 3.2
HDAC10-208ENST00000470965 IFT140Q96RY7 1462 aa34.83■■■■□ 3.17
HDAC10-208ENST00000470965 CUX1P39880 1505 aa34.79■■■■□ 3.16
HDAC10-208ENST00000470965 POLA1P09884 1462 aaPredicted RBP34.75■■■■□ 3.15
HDAC10-208ENST00000470965 FGD5Q6ZNL6 1462 aa34.67■■■■□ 3.14
HDAC10-208ENST00000470965 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
HDAC10-208ENST00000470965 SOGA1O94964 1423 aa34.63■■■■□ 3.13
HDAC10-208ENST00000470965 TARBP1Q13395 1621 aaKnown RBP34.61■■■■□ 3.13
HDAC10-208ENST00000470965 ZNF608Q9ULD9 1512 aaPredicted RBP34.57■■■■□ 3.12
HDAC10-208ENST00000470965 RAD54L2Q9Y4B4 1467 aa34.55■■■■□ 3.12
HDAC10-208ENST00000470965 TOP2BQ02880 1626 aa34.55■■■■□ 3.12
HDAC10-208ENST00000470965 BIVM-ERCC5R4GMW8 1640 aa34.52■■■■□ 3.12
HDAC10-208ENST00000470965 SYNJ1O43426 1573 aa34.49■■■■□ 3.11
HDAC10-208ENST00000470965 WDR97A6NE52 1622 aa34.46■■■■□ 3.11
HDAC10-208ENST00000470965 EIF4G3O43432 1585 aaKnown RBP34.45■■■■□ 3.11
HDAC10-208ENST00000470965 AQRO60306 1485 aaKnown RBP eCLIP34.41■■■■□ 3.11e-8■■■□□ 18.9
HDAC10-208ENST00000470965 ABCA10Q8WWZ4 1543 aa34.39■■■■□ 3.1
HDAC10-208ENST00000470965 TDRD9Q8NDG6 1382 aaKnown RBP34.37■■■■□ 3.09
HDAC10-208ENST00000470965 DNAJC5Q9H3Z4 198 aa34.33■■■■□ 3.09
HDAC10-208ENST00000470965 GRIN2BQ13224 1484 aa34.22■■■■□ 3.07
HDAC10-208ENST00000470965 GAPVD1Q14C86 1478 aa34.22■■■■□ 3.07
HDAC10-208ENST00000470965 ABCA5Q8WWZ7 1642 aa34.19■■■■□ 3.06
HDAC10-208ENST00000470965 MAGI1Q96QZ7 1491 aaPredicted RBP34.14■■■■□ 3.06
HDAC10-208ENST00000470965 OSCARQ8IYS5 282 aa34.13■■■■□ 3.05
HDAC10-208ENST00000470965 SNAPC4Q5SXM2 1469 aa34.11■■■■□ 3.05
HDAC10-208ENST00000470965 PBRM1Q86U86 1689 aa34.06■■■■□ 3.04
HDAC10-208ENST00000470965 SYNJ2O15056 1496 aa33.99■■■■□ 3.03
HDAC10-208ENST00000470965 ERICH3Q5RHP9 1530 aa33.99■■■■□ 3.03
HDAC10-208ENST00000470965 FBLN2P98095 1184 aa33.97■■■■□ 3.03
HDAC10-208ENST00000470965 CHMP7Q8WUX9 453 aaPredicted RBP33.96■■■■□ 3.03
HDAC10-208ENST00000470965 KIF27Q86VH2 1401 aa33.96■■■■□ 3.03
HDAC10-208ENST00000470965 CHD1O14646 1710 aa33.93■■■■□ 3.02
HDAC10-208ENST00000470965 TRIM41Q8WV44 630 aa33.91■■■■□ 3.02
HDAC10-208ENST00000470965 FHAD1B1AJZ9 1412 aa33.87■■■■□ 3.01
HDAC10-208ENST00000470965 ADAMTS12P58397 1594 aa33.86■■■■□ 3.01
HDAC10-208ENST00000470965 IGF1RP08069 1367 aa33.77■■■■□ 3
HDAC10-208ENST00000470965 GRIN2AQ12879 1464 aa33.76■■■■□ 3
HDAC10-208ENST00000470965 CLASP1Q7Z460 1538 aa33.67■■■□□ 2.98
HDAC10-208ENST00000470965 CUL7Q14999 1698 aa33.67■■■□□ 2.98
HDAC10-208ENST00000470965 NUP160Q12769 1436 aa33.63■■■□□ 2.97
HDAC10-208ENST00000470965 CARMIL1Q5VZK9 1371 aa33.59■■■□□ 2.97
HDAC10-208ENST00000470965 RUSC2Q8N2Y8 1516 aa33.55■■■□□ 2.96
HDAC10-208ENST00000470965 CHIC1Q5VXU3 224 aa33.55■■■□□ 2.96
HDAC10-208ENST00000470965 CEP170Q5SW79 1584 aa33.54■■■□□ 2.96
HDAC10-208ENST00000470965 ARHGEF11O15085 1522 aa33.53■■■□□ 2.96
HDAC10-208ENST00000470965 RIMBP3CA6NJZ7 1639 aa33.48■■■□□ 2.95
HDAC10-208ENST00000470965 RIMBP3BA6NNM3 1639 aa33.48■■■□□ 2.95
HDAC10-208ENST00000470965 RIMBP3Q9UFD9 1639 aa33.48■■■□□ 2.95
HDAC10-208ENST00000470965 EEA1Q15075 1411 aa33.44■■■□□ 2.94
HDAC10-208ENST00000470965 RAPGEF2Q9Y4G8 1499 aa33.4■■■□□ 2.94
HDAC10-208ENST00000470965 KIAA0586Q9BVV6 1533 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms