RNA–Protein interactions for RNA: ENST00000470840.5

URM1-205, Transcript of ubiquitin related modifier 1, humanhuman

TSL 2

Gene URM1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URM1-205ENST00000470840 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
URM1-205ENST00000470840 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
URM1-205ENST00000470840 ABCC9O60706 1549 aa26.61■■□□□ 1.85
URM1-205ENST00000470840 ZCCHC6Q5VYS8 1495 aaKnown RBP26.31■■□□□ 1.8
URM1-205ENST00000470840 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
URM1-205ENST00000470840 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
URM1-205ENST00000470840 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
URM1-205ENST00000470840 NACADO15069 1562 aa25.83■■□□□ 1.73
URM1-205ENST00000470840 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
URM1-205ENST00000470840 SCRIBQ14160 1630 aa25.24■■□□□ 1.63
URM1-205ENST00000470840 DNAJC5BQ9UF47 199 aa25.16■■□□□ 1.62
URM1-205ENST00000470840 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
URM1-205ENST00000470840 UNC13AQ9UPW8 1703 aa25.14■■□□□ 1.61
URM1-205ENST00000470840 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
URM1-205ENST00000470840 PABPN1Q86U42 306 aaKnown RBP eCLIP24.78■■□□□ 1.56
URM1-205ENST00000470840 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
URM1-205ENST00000470840 BAZ1AQ9NRL2 1556 aaPredicted RBP24.32■■□□□ 1.48
URM1-205ENST00000470840 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
URM1-205ENST00000470840 MROH2BQ7Z745 1585 aa24.19■■□□□ 1.46
URM1-205ENST00000470840 RSF1Q96T23 1441 aaPredicted RBP24.17■■□□□ 1.46
URM1-205ENST00000470840 EIF4G1Q04637 1599 aaKnown RBP24.14■■□□□ 1.45
URM1-205ENST00000470840 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
URM1-205ENST00000470840 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
URM1-205ENST00000470840 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
URM1-205ENST00000470840 WIZO95785 1651 aa23.99■■□□□ 1.43
URM1-205ENST00000470840 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
URM1-205ENST00000470840 ATAD2BQ9ULI0 1458 aa23.89■■□□□ 1.42
URM1-205ENST00000470840 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
URM1-205ENST00000470840 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
URM1-205ENST00000470840 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
URM1-205ENST00000470840 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
URM1-205ENST00000470840 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
URM1-205ENST00000470840 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
URM1-205ENST00000470840 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
URM1-205ENST00000470840 CFTRP13569 1480 aa23.14■■□□□ 1.29
URM1-205ENST00000470840 CADPSQ9ULU8 1353 aa23.12■■□□□ 1.29
URM1-205ENST00000470840 LAMC3Q9Y6N6 1575 aa23.09■■□□□ 1.29
URM1-205ENST00000470840 CUX2O14529 1486 aa23.05■■□□□ 1.28
URM1-205ENST00000470840 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
URM1-205ENST00000470840 NESP48681 1621 aa22.95■■□□□ 1.26
URM1-205ENST00000470840 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.25
URM1-205ENST00000470840 FANCD2Q9BXW9 1451 aa22.86■■□□□ 1.25
URM1-205ENST00000470840 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
URM1-205ENST00000470840 ABCC8Q09428 1581 aa22.82■■□□□ 1.24
URM1-205ENST00000470840 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
URM1-205ENST00000470840 WRNQ14191 1432 aaPredicted RBP eCLIP22.78■■□□□ 1.24
URM1-205ENST00000470840 KIF21AQ7Z4S6 1674 aa22.77■■□□□ 1.24
URM1-205ENST00000470840 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
URM1-205ENST00000470840 BIVM-ERCC5R4GMW8 1640 aa22.7■■□□□ 1.22
URM1-205ENST00000470840 TOP2BQ02880 1626 aa22.69■■□□□ 1.22
URM1-205ENST00000470840 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
URM1-205ENST00000470840 CUX1P39880 1505 aa22.67■■□□□ 1.22
URM1-205ENST00000470840 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.22
URM1-205ENST00000470840 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
URM1-205ENST00000470840 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
URM1-205ENST00000470840 TOPBP1Q92547 1522 aa22.58■■□□□ 1.21
URM1-205ENST00000470840 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
URM1-205ENST00000470840 WDR62O43379 1518 aa22.52■■□□□ 1.19
URM1-205ENST00000470840 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
URM1-205ENST00000470840 POLA1P09884 1462 aaPredicted RBP22.42■■□□□ 1.18
URM1-205ENST00000470840 EEA1Q15075 1411 aa22.35■■□□□ 1.17
URM1-205ENST00000470840 SOGA1O94964 1423 aa22.34■■□□□ 1.17
URM1-205ENST00000470840 WDR97A6NE52 1622 aa22.31■■□□□ 1.16
URM1-205ENST00000470840 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
URM1-205ENST00000470840 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
URM1-205ENST00000470840 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
URM1-205ENST00000470840 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
URM1-205ENST00000470840 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
URM1-205ENST00000470840 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
URM1-205ENST00000470840 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
URM1-205ENST00000470840 FAM9AQ8IZU1 332 aaPredicted RBP22.17■■□□□ 1.14
URM1-205ENST00000470840 CSRNP3Q8WYN3 585 aa22.14■■□□□ 1.13
URM1-205ENST00000470840 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
URM1-205ENST00000470840 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
URM1-205ENST00000470840 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.13
URM1-205ENST00000470840 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
URM1-205ENST00000470840 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
URM1-205ENST00000470840 KIF21BO75037 1637 aa22.06■■□□□ 1.12
URM1-205ENST00000470840 EIF4G3O43432 1585 aaKnown RBP22.06■■□□□ 1.12
URM1-205ENST00000470840 IGF1RP08069 1367 aa22.05■■□□□ 1.12
URM1-205ENST00000470840 CUL7Q14999 1698 aa22.04■■□□□ 1.12
URM1-205ENST00000470840 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
URM1-205ENST00000470840 GRIN2BQ13224 1484 aa22.02■■□□□ 1.12
URM1-205ENST00000470840 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
URM1-205ENST00000470840 OSCARQ8IYS5 282 aa22■■□□□ 1.11
URM1-205ENST00000470840 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
URM1-205ENST00000470840 CARMIL1Q5VZK9 1371 aa21.95■■□□□ 1.1
URM1-205ENST00000470840 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
URM1-205ENST00000470840 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
URM1-205ENST00000470840 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
URM1-205ENST00000470840 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
URM1-205ENST00000470840 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.09
URM1-205ENST00000470840 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
URM1-205ENST00000470840 TNIKQ9UKE5 1360 aa21.8■■□□□ 1.08
URM1-205ENST00000470840 SYNJ2O15056 1496 aa21.79■■□□□ 1.08
URM1-205ENST00000470840 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
URM1-205ENST00000470840 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
URM1-205ENST00000470840 CTTNBP2Q8WZ74 1663 aa21.74■■□□□ 1.07
URM1-205ENST00000470840 GRIN2AQ12879 1464 aa21.73■■□□□ 1.07
URM1-205ENST00000470840 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms