RNA–Protein interactions for RNA: ENST00000470535.2

ABCA2-215, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-215ENST00000470535 NISCHQ9Y2I1 1504 aa28.74■■■□□ 2.19
ABCA2-215ENST00000470535 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
ABCA2-215ENST00000470535 ABCC9O60706 1549 aa24.94■■□□□ 1.58
ABCA2-215ENST00000470535 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
ABCA2-215ENST00000470535 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
ABCA2-215ENST00000470535 NACADO15069 1562 aa23.98■■□□□ 1.43
ABCA2-215ENST00000470535 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
ABCA2-215ENST00000470535 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
ABCA2-215ENST00000470535 DCAF1Q9Y4B6 1507 aa23.77■■□□□ 1.4
ABCA2-215ENST00000470535 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
ABCA2-215ENST00000470535 UNC13AQ9UPW8 1703 aa23.38■■□□□ 1.33
ABCA2-215ENST00000470535 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
ABCA2-215ENST00000470535 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
ABCA2-215ENST00000470535 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
ABCA2-215ENST00000470535 SHROOM4Q9ULL8 1493 aa23.03■■□□□ 1.28
ABCA2-215ENST00000470535 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
ABCA2-215ENST00000470535 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
ABCA2-215ENST00000470535 CECR2Q9BXF3 1484 aa22.45■■□□□ 1.18
ABCA2-215ENST00000470535 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
ABCA2-215ENST00000470535 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
ABCA2-215ENST00000470535 MROH2BQ7Z745 1585 aa22.15■■□□□ 1.14
ABCA2-215ENST00000470535 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
ABCA2-215ENST00000470535 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
ABCA2-215ENST00000470535 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
ABCA2-215ENST00000470535 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
ABCA2-215ENST00000470535 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
ABCA2-215ENST00000470535 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
ABCA2-215ENST00000470535 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
ABCA2-215ENST00000470535 WIZO95785 1651 aa21.91■■□□□ 1.1
ABCA2-215ENST00000470535 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
ABCA2-215ENST00000470535 NESP48681 1621 aa21.58■■□□□ 1.04
ABCA2-215ENST00000470535 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
ABCA2-215ENST00000470535 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
ABCA2-215ENST00000470535 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
ABCA2-215ENST00000470535 SUPT5HO00267 1087 aaKnown RBP21.5■■□□□ 1.03
ABCA2-215ENST00000470535 DNAJC5Q9H3Z4 198 aa21.48■■□□□ 1.03
ABCA2-215ENST00000470535 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
ABCA2-215ENST00000470535 CUX2O14529 1486 aa21.44■■□□□ 1.02
ABCA2-215ENST00000470535 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
ABCA2-215ENST00000470535 CFTRP13569 1480 aa21.38■■□□□ 1.01
ABCA2-215ENST00000470535 KIF21AQ7Z4S6 1674 aa21.29■■□□□ 1
ABCA2-215ENST00000470535 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
ABCA2-215ENST00000470535 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
ABCA2-215ENST00000470535 THOC2Q8NI27 1593 aaKnown RBP21.21■□□□□ 0.99
ABCA2-215ENST00000470535 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
ABCA2-215ENST00000470535 PRDM2Q13029 1718 aa21.16■□□□□ 0.98
ABCA2-215ENST00000470535 WDR62O43379 1518 aa21.09■□□□□ 0.97
ABCA2-215ENST00000470535 URB2Q14146 1524 aaKnown RBP21.03■□□□□ 0.96
ABCA2-215ENST00000470535 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
ABCA2-215ENST00000470535 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
ABCA2-215ENST00000470535 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
ABCA2-215ENST00000470535 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
ABCA2-215ENST00000470535 CUX1P39880 1505 aa20.77■□□□□ 0.92
ABCA2-215ENST00000470535 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
ABCA2-215ENST00000470535 FGD5Q6ZNL6 1462 aa20.71■□□□□ 0.91
ABCA2-215ENST00000470535 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
ABCA2-215ENST00000470535 SOGA1O94964 1423 aa20.69■□□□□ 0.9
ABCA2-215ENST00000470535 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
ABCA2-215ENST00000470535 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
ABCA2-215ENST00000470535 TARBP1Q13395 1621 aaKnown RBP20.65■□□□□ 0.9
ABCA2-215ENST00000470535 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
ABCA2-215ENST00000470535 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
ABCA2-215ENST00000470535 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
ABCA2-215ENST00000470535 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
ABCA2-215ENST00000470535 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.88
ABCA2-215ENST00000470535 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.881e-6■■■■■ 27
ABCA2-215ENST00000470535 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
ABCA2-215ENST00000470535 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
ABCA2-215ENST00000470535 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
ABCA2-215ENST00000470535 ABCA10Q8WWZ4 1543 aa20.5■□□□□ 0.87
ABCA2-215ENST00000470535 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
ABCA2-215ENST00000470535 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
ABCA2-215ENST00000470535 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
ABCA2-215ENST00000470535 SNAPC4Q5SXM2 1469 aa20.38■□□□□ 0.85
ABCA2-215ENST00000470535 FBLN2P98095 1184 aa20.37■□□□□ 0.85
ABCA2-215ENST00000470535 MAGI1Q96QZ7 1491 aaPredicted RBP20.36■□□□□ 0.85
ABCA2-215ENST00000470535 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
ABCA2-215ENST00000470535 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
ABCA2-215ENST00000470535 CHD1O14646 1710 aa20.28■□□□□ 0.84
ABCA2-215ENST00000470535 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
ABCA2-215ENST00000470535 KIF27Q86VH2 1401 aa20.27■□□□□ 0.83
ABCA2-215ENST00000470535 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
ABCA2-215ENST00000470535 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
ABCA2-215ENST00000470535 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
ABCA2-215ENST00000470535 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
ABCA2-215ENST00000470535 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
ABCA2-215ENST00000470535 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
ABCA2-215ENST00000470535 IGF1RP08069 1367 aa20.16■□□□□ 0.82
ABCA2-215ENST00000470535 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
ABCA2-215ENST00000470535 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
ABCA2-215ENST00000470535 CYB5RLQ6IPT4 315 aa20.09■□□□□ 0.81
ABCA2-215ENST00000470535 CUL7Q14999 1698 aa20.09■□□□□ 0.81
ABCA2-215ENST00000470535 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
ABCA2-215ENST00000470535 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
ABCA2-215ENST00000470535 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
ABCA2-215ENST00000470535 CARMIL1Q5VZK9 1371 aa20.06■□□□□ 0.8
ABCA2-215ENST00000470535 NUP160Q12769 1436 aa20.05■□□□□ 0.8
ABCA2-215ENST00000470535 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
ABCA2-215ENST00000470535 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
ABCA2-215ENST00000470535 RAPGEF2Q9Y4G8 1499 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms