RNA–Protein interactions for RNA: ENST00000470465.1

LINC00879-205, long intergenic non-protein coding RNA 879, humanhuman

TSL 2 BASIC

Gene LINC00879, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-205ENST00000470465 AEBP2Q6ZN18 517 aaPredicted RBP32.59■■■□□ 2.81
LINC00879-205ENST00000470465 CHIC1Q5VXU3 224 aa31.21■■■□□ 2.59
LINC00879-205ENST00000470465 SENP3Q9H4L4 574 aaPredicted RBP27.81■■■□□ 2.04
LINC00879-205ENST00000470465 PHF23Q9BUL5 403 aaPredicted RBP27.45■■□□□ 1.98
LINC00879-205ENST00000470465 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
LINC00879-205ENST00000470465 FOXD1Q16676 465 aa25.85■■□□□ 1.73
LINC00879-205ENST00000470465 PLPPR3Q6T4P5 718 aa25.06■■□□□ 1.6
LINC00879-205ENST00000470465 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
LINC00879-205ENST00000470465 PPP6R1Q9UPN7 881 aa24.33■■□□□ 1.49
LINC00879-205ENST00000470465 ADRA2BP18089 450 aa24.28■■□□□ 1.48
LINC00879-205ENST00000470465 PIAS4Q8N2W9 510 aaPredicted RBP24.25■■□□□ 1.47
LINC00879-205ENST00000470465 ABCC9O60706 1549 aa24.21■■□□□ 1.47
LINC00879-205ENST00000470465 MSH5O43196 834 aa24.15■■□□□ 1.46
LINC00879-205ENST00000470465 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
LINC00879-205ENST00000470465 POTEDQ86YR6 584 aa23.13■■□□□ 1.29
LINC00879-205ENST00000470465 NACADO15069 1562 aa23.11■■□□□ 1.29
LINC00879-205ENST00000470465 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
LINC00879-205ENST00000470465 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
LINC00879-205ENST00000470465 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
LINC00879-205ENST00000470465 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
LINC00879-205ENST00000470465 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
LINC00879-205ENST00000470465 UNC13AQ9UPW8 1703 aa22.56■■□□□ 1.2
LINC00879-205ENST00000470465 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
LINC00879-205ENST00000470465 BICRAQ9NZM4 1560 aa22.53■■□□□ 1.2
LINC00879-205ENST00000470465 SHROOM4Q9ULL8 1493 aa22.37■■□□□ 1.17
LINC00879-205ENST00000470465 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
LINC00879-205ENST00000470465 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
LINC00879-205ENST00000470465 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
LINC00879-205ENST00000470465 DMRT2Q9Y5R5 561 aa22.08■■□□□ 1.13
LINC00879-205ENST00000470465 PPP4R3CPQ6ZMV5 832 aa21.98■■□□□ 1.11
LINC00879-205ENST00000470465 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
LINC00879-205ENST00000470465 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
LINC00879-205ENST00000470465 CECR2Q9BXF3 1484 aa21.85■■□□□ 1.09
LINC00879-205ENST00000470465 CNKSR2Q8WXI2 1034 aa21.53■■□□□ 1.04
LINC00879-205ENST00000470465 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
LINC00879-205ENST00000470465 HOXD11P31277 338 aaPredicted RBP21.36■■□□□ 1.01
LINC00879-205ENST00000470465 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
LINC00879-205ENST00000470465 RNF216Q9NWF9 866 aaPredicted RBP21.27■■□□□ 1
LINC00879-205ENST00000470465 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
LINC00879-205ENST00000470465 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
LINC00879-205ENST00000470465 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
LINC00879-205ENST00000470465 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
LINC00879-205ENST00000470465 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
LINC00879-205ENST00000470465 DCAF8L1A6NGE4 600 aa21.17■□□□□ 0.98
LINC00879-205ENST00000470465 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
LINC00879-205ENST00000470465 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
LINC00879-205ENST00000470465 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.95
LINC00879-205ENST00000470465 CUX2O14529 1486 aa20.94■□□□□ 0.94
LINC00879-205ENST00000470465 NPM3O75607 178 aaKnown RBP20.91■□□□□ 0.94
LINC00879-205ENST00000470465 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
LINC00879-205ENST00000470465 NESP48681 1621 aa20.86■□□□□ 0.93
LINC00879-205ENST00000470465 LAMC3Q9Y6N6 1575 aa20.81■□□□□ 0.92
LINC00879-205ENST00000470465 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
LINC00879-205ENST00000470465 KCNA4P22459 653 aa20.71■□□□□ 0.91
LINC00879-205ENST00000470465 WIZO95785 1651 aa20.7■□□□□ 0.9
LINC00879-205ENST00000470465 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
LINC00879-205ENST00000470465 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
LINC00879-205ENST00000470465 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
LINC00879-205ENST00000470465 THOC2Q8NI27 1593 aaKnown RBP20.66■□□□□ 0.9
LINC00879-205ENST00000470465 RNF39Q9H2S5 420 aa20.6■□□□□ 0.89
LINC00879-205ENST00000470465 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
LINC00879-205ENST00000470465 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
LINC00879-205ENST00000470465 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
LINC00879-205ENST00000470465 CFTRP13569 1480 aa20.51■□□□□ 0.87
LINC00879-205ENST00000470465 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
LINC00879-205ENST00000470465 WDR62O43379 1518 aa20.45■□□□□ 0.86
LINC00879-205ENST00000470465 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
LINC00879-205ENST00000470465 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
LINC00879-205ENST00000470465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.85
LINC00879-205ENST00000470465 C1QBPQ07021 282 aaKnown RBP20.33■□□□□ 0.85
LINC00879-205ENST00000470465 CCDC88BA6NC98 1476 aa20.29■□□□□ 0.84
LINC00879-205ENST00000470465 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
LINC00879-205ENST00000470465 PRDM2Q13029 1718 aa20.17■□□□□ 0.82
LINC00879-205ENST00000470465 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
LINC00879-205ENST00000470465 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
LINC00879-205ENST00000470465 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
LINC00879-205ENST00000470465 DNMBPQ6XZF7 1577 aa19.98■□□□□ 0.79
LINC00879-205ENST00000470465 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
LINC00879-205ENST00000470465 U3KPZ7 1027 aaPredicted RBP19.95■□□□□ 0.78
LINC00879-205ENST00000470465 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
LINC00879-205ENST00000470465 SLC4A2P04920 1241 aa19.88■□□□□ 0.77
LINC00879-205ENST00000470465 TARBP1Q13395 1621 aaKnown RBP19.86■□□□□ 0.77
LINC00879-205ENST00000470465 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
LINC00879-205ENST00000470465 EIF4G3O43432 1585 aaKnown RBP19.82■□□□□ 0.76
LINC00879-205ENST00000470465 AQRO60306 1485 aaKnown RBP eCLIP19.77■□□□□ 0.76
LINC00879-205ENST00000470465 CUX1P39880 1505 aa19.75■□□□□ 0.75
LINC00879-205ENST00000470465 SOGA1O94964 1423 aa19.75■□□□□ 0.75
LINC00879-205ENST00000470465 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
LINC00879-205ENST00000470465 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
LINC00879-205ENST00000470465 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
LINC00879-205ENST00000470465 TRIM41Q8WV44 630 aa19.71■□□□□ 0.75
LINC00879-205ENST00000470465 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
LINC00879-205ENST00000470465 TDRD9Q8NDG6 1382 aaKnown RBP19.67■□□□□ 0.74
LINC00879-205ENST00000470465 ARHGEF11O15085 1522 aa19.62■□□□□ 0.73
LINC00879-205ENST00000470465 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
LINC00879-205ENST00000470465 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
LINC00879-205ENST00000470465 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
LINC00879-205ENST00000470465 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
LINC00879-205ENST00000470465 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
LINC00879-205ENST00000470465 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms