RNA–Protein interactions for RNA: ENST00000470315.1

ACSS2-207, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 3

Gene ACSS2, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-207ENST00000470315 NISCHQ9Y2I1 1504 aa26.08■■□□□ 1.77
ACSS2-207ENST00000470315 CCDC180Q9P1Z9 1646 aa23.56■■□□□ 1.36
ACSS2-207ENST00000470315 ABCC9O60706 1549 aa23.53■■□□□ 1.36
ACSS2-207ENST00000470315 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
ACSS2-207ENST00000470315 NACADO15069 1562 aa22.21■■□□□ 1.15
ACSS2-207ENST00000470315 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
ACSS2-207ENST00000470315 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
ACSS2-207ENST00000470315 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
ACSS2-207ENST00000470315 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
ACSS2-207ENST00000470315 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
ACSS2-207ENST00000470315 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
ACSS2-207ENST00000470315 ZCCHC6Q5VYS8 1495 aaKnown RBP21.61■■□□□ 1.05
ACSS2-207ENST00000470315 DCAF1Q9Y4B6 1507 aa21.57■■□□□ 1.04
ACSS2-207ENST00000470315 SHROOM4Q9ULL8 1493 aa21.48■■□□□ 1.03
ACSS2-207ENST00000470315 SCRIBQ14160 1630 aa21.38■■□□□ 1.01
ACSS2-207ENST00000470315 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
ACSS2-207ENST00000470315 EIF4G1Q04637 1599 aaKnown RBP21.25■□□□□ 0.99
ACSS2-207ENST00000470315 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
ACSS2-207ENST00000470315 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
ACSS2-207ENST00000470315 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
ACSS2-207ENST00000470315 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
ACSS2-207ENST00000470315 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
ACSS2-207ENST00000470315 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
ACSS2-207ENST00000470315 CUX2O14529 1486 aa20.37■□□□□ 0.85
ACSS2-207ENST00000470315 SMARCA2P51531 1590 aa20.35■□□□□ 0.85
ACSS2-207ENST00000470315 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
ACSS2-207ENST00000470315 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
ACSS2-207ENST00000470315 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
ACSS2-207ENST00000470315 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
ACSS2-207ENST00000470315 NESP48681 1621 aa20.21■□□□□ 0.83
ACSS2-207ENST00000470315 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
ACSS2-207ENST00000470315 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
ACSS2-207ENST00000470315 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
ACSS2-207ENST00000470315 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
ACSS2-207ENST00000470315 KIF21AQ7Z4S6 1674 aa20.04■□□□□ 0.8
ACSS2-207ENST00000470315 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
ACSS2-207ENST00000470315 WIZO95785 1651 aa19.88■□□□□ 0.77
ACSS2-207ENST00000470315 PDS5BQ9NTI5 1447 aa19.87■□□□□ 0.77
ACSS2-207ENST00000470315 CADPSQ9ULU8 1353 aa19.81■□□□□ 0.76
ACSS2-207ENST00000470315 WDR62O43379 1518 aa19.78■□□□□ 0.76
ACSS2-207ENST00000470315 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
ACSS2-207ENST00000470315 CEP164Q9UPV0 1460 aa19.66■□□□□ 0.74
ACSS2-207ENST00000470315 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
ACSS2-207ENST00000470315 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
ACSS2-207ENST00000470315 CFTRP13569 1480 aa19.6■□□□□ 0.73
ACSS2-207ENST00000470315 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
ACSS2-207ENST00000470315 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
ACSS2-207ENST00000470315 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
ACSS2-207ENST00000470315 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
ACSS2-207ENST00000470315 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
ACSS2-207ENST00000470315 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
ACSS2-207ENST00000470315 ZNF608Q9ULD9 1512 aaPredicted RBP19.26■□□□□ 0.67
ACSS2-207ENST00000470315 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
ACSS2-207ENST00000470315 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
ACSS2-207ENST00000470315 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
ACSS2-207ENST00000470315 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
ACSS2-207ENST00000470315 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
ACSS2-207ENST00000470315 EIF4G3O43432 1585 aaKnown RBP19.22■□□□□ 0.67
ACSS2-207ENST00000470315 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
ACSS2-207ENST00000470315 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
ACSS2-207ENST00000470315 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
ACSS2-207ENST00000470315 CHD1O14646 1710 aa19.13■□□□□ 0.65
ACSS2-207ENST00000470315 ARHGEF11O15085 1522 aa19.11■□□□□ 0.65
ACSS2-207ENST00000470315 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
ACSS2-207ENST00000470315 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.644e-12■■■■■ 56.1
ACSS2-207ENST00000470315 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
ACSS2-207ENST00000470315 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
ACSS2-207ENST00000470315 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
ACSS2-207ENST00000470315 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
ACSS2-207ENST00000470315 CUX1P39880 1505 aa18.9■□□□□ 0.62
ACSS2-207ENST00000470315 SOGA1O94964 1423 aa18.89■□□□□ 0.61
ACSS2-207ENST00000470315 CLASP1Q7Z460 1538 aa18.87■□□□□ 0.61
ACSS2-207ENST00000470315 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
ACSS2-207ENST00000470315 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
ACSS2-207ENST00000470315 CYB5RLQ6IPT4 315 aa18.83■□□□□ 0.6
ACSS2-207ENST00000470315 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
ACSS2-207ENST00000470315 MAGI1Q96QZ7 1491 aaPredicted RBP18.82■□□□□ 0.6
ACSS2-207ENST00000470315 FBLN2P98095 1184 aa18.8■□□□□ 0.6
ACSS2-207ENST00000470315 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
ACSS2-207ENST00000470315 GRIN2BQ13224 1484 aa18.77■□□□□ 0.6
ACSS2-207ENST00000470315 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
ACSS2-207ENST00000470315 SYNJ2O15056 1496 aa18.75■□□□□ 0.59
ACSS2-207ENST00000470315 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
ACSS2-207ENST00000470315 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
ACSS2-207ENST00000470315 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
ACSS2-207ENST00000470315 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
ACSS2-207ENST00000470315 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
ACSS2-207ENST00000470315 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
ACSS2-207ENST00000470315 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
ACSS2-207ENST00000470315 GRIN2AQ12879 1464 aa18.56■□□□□ 0.56
ACSS2-207ENST00000470315 CEP170Q5SW79 1584 aa18.55■□□□□ 0.56
ACSS2-207ENST00000470315 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
ACSS2-207ENST00000470315 SHROOM2Q13796 1616 aa18.52■□□□□ 0.56
ACSS2-207ENST00000470315 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
ACSS2-207ENST00000470315 NUP160Q12769 1436 aa18.51■□□□□ 0.55
ACSS2-207ENST00000470315 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
ACSS2-207ENST00000470315 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
ACSS2-207ENST00000470315 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
ACSS2-207ENST00000470315 KIF13AQ9H1H9 1805 aa18.37■□□□□ 0.53
ACSS2-207ENST00000470315 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms