RNA–Protein interactions for RNA: ENST00000469600.1

ACAA1-215, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 2

Gene ACAA1, Length 876 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-215ENST00000469600 NISCHQ9Y2I1 1504 aa34.99■■■■□ 3.19
ACAA1-215ENST00000469600 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.55
ACAA1-215ENST00000469600 ABCC9O60706 1549 aa30.47■■■□□ 2.47
ACAA1-215ENST00000469600 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
ACAA1-215ENST00000469600 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
ACAA1-215ENST00000469600 NACADO15069 1562 aa29.17■■■□□ 2.26
ACAA1-215ENST00000469600 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
ACAA1-215ENST00000469600 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
ACAA1-215ENST00000469600 DCAF1Q9Y4B6 1507 aa28.85■■■□□ 2.21
ACAA1-215ENST00000469600 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.171e-7■□□□□ 9.6
ACAA1-215ENST00000469600 UNC13AQ9UPW8 1703 aa28.44■■■□□ 2.14
ACAA1-215ENST00000469600 SCRIBQ14160 1630 aa28.41■■■□□ 2.14
ACAA1-215ENST00000469600 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
ACAA1-215ENST00000469600 DNAJC5BQ9UF47 199 aa27.97■■■□□ 2.07
ACAA1-215ENST00000469600 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
ACAA1-215ENST00000469600 EIF4G1Q04637 1599 aaKnown RBP27.58■■■□□ 2.01
ACAA1-215ENST00000469600 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
ACAA1-215ENST00000469600 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
ACAA1-215ENST00000469600 SMARCA4P51532 1647 aa27.11■■□□□ 1.93
ACAA1-215ENST00000469600 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
ACAA1-215ENST00000469600 MROH2BQ7Z745 1585 aa27■■□□□ 1.91
ACAA1-215ENST00000469600 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
ACAA1-215ENST00000469600 NCAPD3P42695 1498 aa26.96■■□□□ 1.91
ACAA1-215ENST00000469600 SMARCA2P51531 1590 aa26.93■■□□□ 1.9
ACAA1-215ENST00000469600 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
ACAA1-215ENST00000469600 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
ACAA1-215ENST00000469600 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
ACAA1-215ENST00000469600 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
ACAA1-215ENST00000469600 WIZO95785 1651 aa26.7■■□□□ 1.86
ACAA1-215ENST00000469600 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
ACAA1-215ENST00000469600 NESP48681 1621 aa26.36■■□□□ 1.81
ACAA1-215ENST00000469600 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
ACAA1-215ENST00000469600 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
ACAA1-215ENST00000469600 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
ACAA1-215ENST00000469600 LAMC3Q9Y6N6 1575 aa26.19■■□□□ 1.78
ACAA1-215ENST00000469600 CCDC88BA6NC98 1476 aa26.16■■□□□ 1.78
ACAA1-215ENST00000469600 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
ACAA1-215ENST00000469600 CFTRP13569 1480 aa26.04■■□□□ 1.76
ACAA1-215ENST00000469600 KIF21AQ7Z4S6 1674 aa25.94■■□□□ 1.74
ACAA1-215ENST00000469600 FANCD2Q9BXW9 1451 aa25.92■■□□□ 1.74
ACAA1-215ENST00000469600 CEP164Q9UPV0 1460 aa25.87■■□□□ 1.73
ACAA1-215ENST00000469600 CUX2O14529 1486 aa25.85■■□□□ 1.73
ACAA1-215ENST00000469600 MRC2Q9UBG0 1479 aa25.81■■□□□ 1.72
ACAA1-215ENST00000469600 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
ACAA1-215ENST00000469600 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
ACAA1-215ENST00000469600 WDR62O43379 1518 aa25.66■■□□□ 1.7
ACAA1-215ENST00000469600 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
ACAA1-215ENST00000469600 TOPBP1Q92547 1522 aa25.48■■□□□ 1.67
ACAA1-215ENST00000469600 ABCC8Q09428 1581 aa25.47■■□□□ 1.67
ACAA1-215ENST00000469600 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
ACAA1-215ENST00000469600 CUX1P39880 1505 aa25.32■■□□□ 1.64
ACAA1-215ENST00000469600 IFT140Q96RY7 1462 aa25.31■■□□□ 1.64
ACAA1-215ENST00000469600 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
ACAA1-215ENST00000469600 SOGA1O94964 1423 aa25.25■■□□□ 1.63
ACAA1-215ENST00000469600 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
ACAA1-215ENST00000469600 ZNF608Q9ULD9 1512 aaPredicted RBP25.23■■□□□ 1.63
ACAA1-215ENST00000469600 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
ACAA1-215ENST00000469600 WRNQ14191 1432 aaPredicted RBP eCLIP25.21■■□□□ 1.63
ACAA1-215ENST00000469600 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
ACAA1-215ENST00000469600 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.622e-7■■■□□ 15
ACAA1-215ENST00000469600 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
ACAA1-215ENST00000469600 DNAJC5Q9H3Z4 198 aa25.12■■□□□ 1.61
ACAA1-215ENST00000469600 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
ACAA1-215ENST00000469600 TOP2BQ02880 1626 aa25.07■■□□□ 1.6
ACAA1-215ENST00000469600 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
ACAA1-215ENST00000469600 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
ACAA1-215ENST00000469600 FBLN2P98095 1184 aa24.98■■□□□ 1.59
ACAA1-215ENST00000469600 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
ACAA1-215ENST00000469600 ABCA10Q8WWZ4 1543 aa24.95■■□□□ 1.58
ACAA1-215ENST00000469600 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
ACAA1-215ENST00000469600 GRIN2BQ13224 1484 aa24.89■■□□□ 1.57
ACAA1-215ENST00000469600 WDR97A6NE52 1622 aa24.88■■□□□ 1.57
ACAA1-215ENST00000469600 SNAPC4Q5SXM2 1469 aa24.86■■□□□ 1.57
ACAA1-215ENST00000469600 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
ACAA1-215ENST00000469600 TRIM41Q8WV44 630 aa24.82■■□□□ 1.56
ACAA1-215ENST00000469600 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
ACAA1-215ENST00000469600 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
ACAA1-215ENST00000469600 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
ACAA1-215ENST00000469600 CHD1O14646 1710 aa24.71■■□□□ 1.55
ACAA1-215ENST00000469600 SYNJ2O15056 1496 aa24.7■■□□□ 1.55
ACAA1-215ENST00000469600 KIF27Q86VH2 1401 aa24.7■■□□□ 1.55
ACAA1-215ENST00000469600 ERICH3Q5RHP9 1530 aa24.64■■□□□ 1.53
ACAA1-215ENST00000469600 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
ACAA1-215ENST00000469600 IGF1RP08069 1367 aa24.61■■□□□ 1.53
ACAA1-215ENST00000469600 ADAMTS12P58397 1594 aa24.58■■□□□ 1.52
ACAA1-215ENST00000469600 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
ACAA1-215ENST00000469600 RUSC2Q8N2Y8 1516 aa24.52■■□□□ 1.52
ACAA1-215ENST00000469600 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
ACAA1-215ENST00000469600 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
ACAA1-215ENST00000469600 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
ACAA1-215ENST00000469600 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
ACAA1-215ENST00000469600 NUP160Q12769 1436 aa24.42■■□□□ 1.5
ACAA1-215ENST00000469600 CEP170Q5SW79 1584 aa24.41■■□□□ 1.5
ACAA1-215ENST00000469600 CUL7Q14999 1698 aa24.4■■□□□ 1.5
ACAA1-215ENST00000469600 RIMBP3CA6NJZ7 1639 aa24.39■■□□□ 1.5
ACAA1-215ENST00000469600 RIMBP3BA6NNM3 1639 aa24.39■■□□□ 1.5
ACAA1-215ENST00000469600 RIMBP3Q9UFD9 1639 aa24.39■■□□□ 1.5
ACAA1-215ENST00000469600 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
ACAA1-215ENST00000469600 FAM9AQ8IZU1 332 aaPredicted RBP24.38■■□□□ 1.49
ACAA1-215ENST00000469600 CSRNP3Q8WYN3 585 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms