RNA–Protein interactions for RNA: ENST00000469291.1

NUCB1-210, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-210ENST00000469291 NISCHQ9Y2I1 1504 aa33.72■■■□□ 2.99
NUCB1-210ENST00000469291 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
NUCB1-210ENST00000469291 ABCC9O60706 1549 aa29.31■■■□□ 2.28
NUCB1-210ENST00000469291 RB1CC1Q8TDY2 1594 aa28.27■■■□□ 2.12
NUCB1-210ENST00000469291 NACADO15069 1562 aa28.23■■■□□ 2.11
NUCB1-210ENST00000469291 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
NUCB1-210ENST00000469291 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
NUCB1-210ENST00000469291 MYO15BQ96JP2 1530 aa28.04■■■□□ 2.08
NUCB1-210ENST00000469291 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
NUCB1-210ENST00000469291 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
NUCB1-210ENST00000469291 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
NUCB1-210ENST00000469291 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
NUCB1-210ENST00000469291 PABPN1Q86U42 306 aaKnown RBP eCLIP27.34■■□□□ 1.97
NUCB1-210ENST00000469291 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
NUCB1-210ENST00000469291 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
NUCB1-210ENST00000469291 EIF4G1Q04637 1599 aaKnown RBP26.66■■□□□ 1.86
NUCB1-210ENST00000469291 CC2D2AQ9P2K1 1620 aa26.55■■□□□ 1.84
NUCB1-210ENST00000469291 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
NUCB1-210ENST00000469291 SMARCA4P51532 1647 aa26.2■■□□□ 1.78
NUCB1-210ENST00000469291 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
NUCB1-210ENST00000469291 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
NUCB1-210ENST00000469291 ATAD2BQ9ULI0 1458 aa26.01■■□□□ 1.75
NUCB1-210ENST00000469291 NCAPD3P42695 1498 aa25.99■■□□□ 1.75
NUCB1-210ENST00000469291 MROH2BQ7Z745 1585 aa25.97■■□□□ 1.75
NUCB1-210ENST00000469291 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
NUCB1-210ENST00000469291 HMGXB3Q12766 1538 aa25.92■■□□□ 1.74
NUCB1-210ENST00000469291 BAZ1BQ9UIG0 1483 aaKnown RBP25.82■■□□□ 1.72
NUCB1-210ENST00000469291 WIZO95785 1651 aa25.73■■□□□ 1.71
NUCB1-210ENST00000469291 RSF1Q96T23 1441 aaPredicted RBP25.65■■□□□ 1.7
NUCB1-210ENST00000469291 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
NUCB1-210ENST00000469291 LAMC3Q9Y6N6 1575 aa25.37■■□□□ 1.65
NUCB1-210ENST00000469291 NESP48681 1621 aa25.35■■□□□ 1.65
NUCB1-210ENST00000469291 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
NUCB1-210ENST00000469291 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
NUCB1-210ENST00000469291 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
NUCB1-210ENST00000469291 KIF21AQ7Z4S6 1674 aa25.14■■□□□ 1.62
NUCB1-210ENST00000469291 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
NUCB1-210ENST00000469291 CFTRP13569 1480 aa25.09■■□□□ 1.61
NUCB1-210ENST00000469291 PRDM2Q13029 1718 aa25.05■■□□□ 1.6
NUCB1-210ENST00000469291 CUX2O14529 1486 aa25.03■■□□□ 1.6
NUCB1-210ENST00000469291 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
NUCB1-210ENST00000469291 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
NUCB1-210ENST00000469291 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
NUCB1-210ENST00000469291 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
NUCB1-210ENST00000469291 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
NUCB1-210ENST00000469291 WDR62O43379 1518 aa24.83■■□□□ 1.57
NUCB1-210ENST00000469291 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
NUCB1-210ENST00000469291 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
NUCB1-210ENST00000469291 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
NUCB1-210ENST00000469291 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
NUCB1-210ENST00000469291 IFT140Q96RY7 1462 aa24.42■■□□□ 1.5
NUCB1-210ENST00000469291 CUX1P39880 1505 aa24.37■■□□□ 1.49
NUCB1-210ENST00000469291 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
NUCB1-210ENST00000469291 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
NUCB1-210ENST00000469291 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
NUCB1-210ENST00000469291 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
NUCB1-210ENST00000469291 SOGA1O94964 1423 aa24.25■■□□□ 1.47
NUCB1-210ENST00000469291 EIF4G3O43432 1585 aaKnown RBP24.24■■□□□ 1.47
NUCB1-210ENST00000469291 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
NUCB1-210ENST00000469291 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
NUCB1-210ENST00000469291 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
NUCB1-210ENST00000469291 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
NUCB1-210ENST00000469291 DNAJC5Q9H3Z4 198 aa24.19■■□□□ 1.46
NUCB1-210ENST00000469291 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
NUCB1-210ENST00000469291 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
NUCB1-210ENST00000469291 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.455e-14■□□□□ 10.5
NUCB1-210ENST00000469291 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
NUCB1-210ENST00000469291 ABCA10Q8WWZ4 1543 aa24.07■■□□□ 1.44
NUCB1-210ENST00000469291 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
NUCB1-210ENST00000469291 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
NUCB1-210ENST00000469291 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
NUCB1-210ENST00000469291 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
NUCB1-210ENST00000469291 CHD1O14646 1710 aa23.96■■□□□ 1.43
NUCB1-210ENST00000469291 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
NUCB1-210ENST00000469291 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
NUCB1-210ENST00000469291 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
NUCB1-210ENST00000469291 FBLN2P98095 1184 aa23.85■■□□□ 1.41
NUCB1-210ENST00000469291 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
NUCB1-210ENST00000469291 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
NUCB1-210ENST00000469291 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
NUCB1-210ENST00000469291 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
NUCB1-210ENST00000469291 KIF27Q86VH2 1401 aa23.73■■□□□ 1.39
NUCB1-210ENST00000469291 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
NUCB1-210ENST00000469291 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
NUCB1-210ENST00000469291 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
NUCB1-210ENST00000469291 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
NUCB1-210ENST00000469291 CUL7Q14999 1698 aa23.63■■□□□ 1.37
NUCB1-210ENST00000469291 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
NUCB1-210ENST00000469291 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
NUCB1-210ENST00000469291 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
NUCB1-210ENST00000469291 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
NUCB1-210ENST00000469291 IGF1RP08069 1367 aa23.57■■□□□ 1.36
NUCB1-210ENST00000469291 CEP170Q5SW79 1584 aa23.56■■□□□ 1.36
NUCB1-210ENST00000469291 NUP160Q12769 1436 aa23.55■■□□□ 1.36
NUCB1-210ENST00000469291 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
NUCB1-210ENST00000469291 RUSC2Q8N2Y8 1516 aa23.46■■□□□ 1.35
NUCB1-210ENST00000469291 SHROOM2Q13796 1616 aa23.41■■□□□ 1.34
NUCB1-210ENST00000469291 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
NUCB1-210ENST00000469291 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
NUCB1-210ENST00000469291 KIAA0586Q9BVV6 1533 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms