RNA–Protein interactions for RNA: ENST00000469017.6

SPIN1-203, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 2,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-203ENST00000469017 NISCHQ9Y2I1 1504 aa47.38■■■■■ 5.17
SPIN1-203ENST00000469017 CCDC180Q9P1Z9 1646 aa41.59■■■■■ 4.25
SPIN1-203ENST00000469017 ABCC9O60706 1549 aa40.19■■■■■ 4.02
SPIN1-203ENST00000469017 ZCCHC6Q5VYS8 1495 aaKnown RBP39.63■■■■□ 3.94
SPIN1-203ENST00000469017 DCAF8L2P0C7V8 631 aa39.56■■■■□ 3.92
SPIN1-203ENST00000469017 DCAF1Q9Y4B6 1507 aa39.05■■■■□ 3.84
SPIN1-203ENST00000469017 NACADO15069 1562 aa38.92■■■■□ 3.82
SPIN1-203ENST00000469017 MYO15BQ96JP2 1530 aa38.84■■■■□ 3.81
SPIN1-203ENST00000469017 RB1CC1Q8TDY2 1594 aa38.79■■■■□ 3.8
SPIN1-203ENST00000469017 SHROOM4Q9ULL8 1493 aa38.33■■■■□ 3.73
SPIN1-203ENST00000469017 SCRIBQ14160 1630 aa38.31■■■■□ 3.72
SPIN1-203ENST00000469017 UNC13AQ9UPW8 1703 aa38.1■■■■□ 3.69
SPIN1-203ENST00000469017 PABPN1Q86U42 306 aaKnown RBP eCLIP37.8■■■■□ 3.64
SPIN1-203ENST00000469017 BICRAQ9NZM4 1560 aa37.71■■■■□ 3.63
SPIN1-203ENST00000469017 CECR2Q9BXF3 1484 aa36.98■■■■□ 3.51
SPIN1-203ENST00000469017 MROH2BQ7Z745 1585 aa36.64■■■■□ 3.46
SPIN1-203ENST00000469017 EIF4G1Q04637 1599 aaKnown RBP36.62■■■■□ 3.45
SPIN1-203ENST00000469017 BAZ1AQ9NRL2 1556 aaPredicted RBP36.61■■■■□ 3.45
SPIN1-203ENST00000469017 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
SPIN1-203ENST00000469017 RSF1Q96T23 1441 aaPredicted RBP36.49■■■■□ 3.43
SPIN1-203ENST00000469017 SUPT5HO00267 1087 aaKnown RBP36.46■■■■□ 3.43
SPIN1-203ENST00000469017 WIZO95785 1651 aa36.33■■■■□ 3.41
SPIN1-203ENST00000469017 CC2D2AQ9P2K1 1620 aa36.3■■■■□ 3.4
SPIN1-203ENST00000469017 DNAJC5BQ9UF47 199 aa36.2■■■■□ 3.39
SPIN1-203ENST00000469017 ATAD2BQ9ULI0 1458 aa36.18■■■■□ 3.38
SPIN1-203ENST00000469017 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
SPIN1-203ENST00000469017 SMARCA2P51531 1590 aa36.07■■■■□ 3.37
SPIN1-203ENST00000469017 NCAPD3P42695 1498 aa35.94■■■■□ 3.34
SPIN1-203ENST00000469017 BAZ1BQ9UIG0 1483 aaKnown RBP35.93■■■■□ 3.34
SPIN1-203ENST00000469017 TOP2AP11388 1531 aaKnown RBP35.83■■■■□ 3.33
SPIN1-203ENST00000469017 HMGXB3Q12766 1538 aa35.81■■■■□ 3.32
SPIN1-203ENST00000469017 CCDC88BA6NC98 1476 aa35.51■■■■□ 3.27
SPIN1-203ENST00000469017 NESP48681 1621 aa35.07■■■■□ 3.21
SPIN1-203ENST00000469017 CADPSQ9ULU8 1353 aa35.01■■■■□ 3.19
SPIN1-203ENST00000469017 CFTRP13569 1480 aa34.96■■■■□ 3.19
SPIN1-203ENST00000469017 LAMC3Q9Y6N6 1575 aa34.84■■■■□ 3.17
SPIN1-203ENST00000469017 PRDM2Q13029 1718 aa34.72■■■■□ 3.15
SPIN1-203ENST00000469017 FANCD2Q9BXW9 1451 aa34.65■■■■□ 3.14
SPIN1-203ENST00000469017 PDS5BQ9NTI5 1447 aa34.6■■■■□ 3.13
SPIN1-203ENST00000469017 KIF21AQ7Z4S6 1674 aa34.6■■■■□ 3.13
SPIN1-203ENST00000469017 ABCC8Q09428 1581 aa34.6■■■■□ 3.13
SPIN1-203ENST00000469017 ERCC6Q03468 1493 aa34.48■■■■□ 3.11
SPIN1-203ENST00000469017 CEP164Q9UPV0 1460 aa34.48■■■■□ 3.11
SPIN1-203ENST00000469017 CHIC1Q5VXU3 224 aa34.42■■■■□ 3.1
SPIN1-203ENST00000469017 WRNQ14191 1432 aaPredicted RBP eCLIP34.36■■■■□ 3.09
SPIN1-203ENST00000469017 SYNJ1O43426 1573 aa34.3■■■■□ 3.08
SPIN1-203ENST00000469017 CUX1P39880 1505 aa34.3■■■■□ 3.08
SPIN1-203ENST00000469017 URB2Q14146 1524 aaKnown RBP34.29■■■■□ 3.08
SPIN1-203ENST00000469017 TRIM41Q8WV44 630 aa34.24■■■■□ 3.07
SPIN1-203ENST00000469017 MRC2Q9UBG0 1479 aa34.23■■■■□ 3.07
SPIN1-203ENST00000469017 TOPBP1Q92547 1522 aa34.19■■■■□ 3.06
SPIN1-203ENST00000469017 THOC2Q8NI27 1593 aaKnown RBP34.19■■■■□ 3.06
SPIN1-203ENST00000469017 DNMBPQ6XZF7 1577 aa34.16■■■■□ 3.06
SPIN1-203ENST00000469017 TOP2BQ02880 1626 aa34.15■■■■□ 3.06
SPIN1-203ENST00000469017 BIVM-ERCC5R4GMW8 1640 aa34.11■■■■□ 3.05
SPIN1-203ENST00000469017 WDR62O43379 1518 aa34.07■■■■□ 3.04
SPIN1-203ENST00000469017 FGD5Q6ZNL6 1462 aa34.04■■■■□ 3.04
SPIN1-203ENST00000469017 POLA1P09884 1462 aaPredicted RBP33.98■■■■□ 3.03
SPIN1-203ENST00000469017 RAD54L2Q9Y4B4 1467 aa33.92■■■■□ 3.02
SPIN1-203ENST00000469017 CUX2O14529 1486 aa33.86■■■■□ 3.01
SPIN1-203ENST00000469017 SOGA1O94964 1423 aa33.84■■■■□ 3.01
SPIN1-203ENST00000469017 FAM9AQ8IZU1 332 aaPredicted RBP33.73■■■□□ 2.99
SPIN1-203ENST00000469017 TARBP1Q13395 1621 aaKnown RBP33.73■■■□□ 2.99
SPIN1-203ENST00000469017 RUSC2Q8N2Y8 1516 aa33.73■■■□□ 2.99
SPIN1-203ENST00000469017 IFT140Q96RY7 1462 aa33.67■■■□□ 2.98
SPIN1-203ENST00000469017 TDRD9Q8NDG6 1382 aaKnown RBP33.66■■■□□ 2.98
SPIN1-203ENST00000469017 ABCA10Q8WWZ4 1543 aa33.65■■■□□ 2.98
SPIN1-203ENST00000469017 ZNF608Q9ULD9 1512 aaPredicted RBP33.64■■■□□ 2.98
SPIN1-203ENST00000469017 WDR97A6NE52 1622 aa33.64■■■□□ 2.98
SPIN1-203ENST00000469017 AQRO60306 1485 aaKnown RBP eCLIP33.57■■■□□ 2.96
SPIN1-203ENST00000469017 KIF27Q86VH2 1401 aa33.52■■■□□ 2.96
SPIN1-203ENST00000469017 ABCA5Q8WWZ7 1642 aa33.47■■■□□ 2.95
SPIN1-203ENST00000469017 EIF4G3O43432 1585 aaKnown RBP33.46■■■□□ 2.95
SPIN1-203ENST00000469017 GAPVD1Q14C86 1478 aa33.45■■■□□ 2.95
SPIN1-203ENST00000469017 EHMT2Q96KQ7 1210 aa33.4■■■□□ 2.94
SPIN1-203ENST00000469017 CSRNP3Q8WYN3 585 aa33.37■■■□□ 2.93
SPIN1-203ENST00000469017 IGF1RP08069 1367 aa33.35■■■□□ 2.93
SPIN1-203ENST00000469017 EEA1Q15075 1411 aa33.34■■■□□ 2.93
SPIN1-203ENST00000469017 PBRM1Q86U86 1689 aa33.33■■■□□ 2.93
SPIN1-203ENST00000469017 GRIN2BQ13224 1484 aa33.28■■■□□ 2.92
SPIN1-203ENST00000469017 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
SPIN1-203ENST00000469017 SNAPC4Q5SXM2 1469 aa33.21■■■□□ 2.91
SPIN1-203ENST00000469017 LOC105371045A0A1W2PR82 267 aa33.19■■■□□ 2.9
SPIN1-203ENST00000469017 CARMIL1Q5VZK9 1371 aa33.16■■■□□ 2.9
SPIN1-203ENST00000469017 PRXQ9BXM0 1461 aa33.12■■■□□ 2.89
SPIN1-203ENST00000469017 RAPGEF2Q9Y4G8 1499 aa33.1■■■□□ 2.89
SPIN1-203ENST00000469017 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
SPIN1-203ENST00000469017 CUL7Q14999 1698 aa33.09■■■□□ 2.89
SPIN1-203ENST00000469017 FBLN2P98095 1184 aa33.07■■■□□ 2.88
SPIN1-203ENST00000469017 MAGI1Q96QZ7 1491 aaPredicted RBP33.05■■■□□ 2.88
SPIN1-203ENST00000469017 FHAD1B1AJZ9 1412 aa33.04■■■□□ 2.88
SPIN1-203ENST00000469017 KIF21BO75037 1637 aa33.02■■■□□ 2.88
SPIN1-203ENST00000469017 CHMP7Q8WUX9 453 aaPredicted RBP32.98■■■□□ 2.87
SPIN1-203ENST00000469017 SYNJ2O15056 1496 aa32.96■■■□□ 2.87
SPIN1-203ENST00000469017 GOLGA3Q08378 1498 aa32.94■■■□□ 2.86
SPIN1-203ENST00000469017 UBTFP17480 764 aaKnown RBP32.93■■■□□ 2.86
SPIN1-203ENST00000469017 CHD1O14646 1710 aa32.9■■■□□ 2.86
SPIN1-203ENST00000469017 GRIN2AQ12879 1464 aa32.89■■■□□ 2.86
SPIN1-203ENST00000469017 RANGAP1P46060 587 aaPredicted RBP32.78■■■□□ 2.84
SPIN1-203ENST00000469017 CEP170Q5SW79 1584 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms