RNA–Protein interactions for RNA: ENST00000468918.5

COX17-202, Transcript of cytochrome c oxidase copper chaperone COX17, humanhuman

TSL 4

Gene COX17, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX17-202ENST00000468918 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
COX17-202ENST00000468918 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
COX17-202ENST00000468918 ABCC9O60706 1549 aa29.3■■■□□ 2.28
COX17-202ENST00000468918 RB1CC1Q8TDY2 1594 aa27.91■■■□□ 2.06
COX17-202ENST00000468918 DCAF8L2P0C7V8 631 aa27.91■■■□□ 2.06
COX17-202ENST00000468918 NACADO15069 1562 aa27.86■■■□□ 2.05
COX17-202ENST00000468918 ZCCHC6Q5VYS8 1495 aaKnown RBP27.84■■■□□ 2.05
COX17-202ENST00000468918 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
COX17-202ENST00000468918 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
COX17-202ENST00000468918 UNC13AQ9UPW8 1703 aa27.4■■□□□ 1.98
COX17-202ENST00000468918 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
COX17-202ENST00000468918 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
COX17-202ENST00000468918 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.94
COX17-202ENST00000468918 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
COX17-202ENST00000468918 SHROOM4Q9ULL8 1493 aa26.76■■□□□ 1.87
COX17-202ENST00000468918 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
COX17-202ENST00000468918 EIF4G1Q04637 1599 aaKnown RBP26.39■■□□□ 1.82
COX17-202ENST00000468918 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
COX17-202ENST00000468918 SMARCA4P51532 1647 aa25.94■■□□□ 1.74
COX17-202ENST00000468918 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
COX17-202ENST00000468918 MROH2BQ7Z745 1585 aa25.77■■□□□ 1.72
COX17-202ENST00000468918 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
COX17-202ENST00000468918 NCAPD3P42695 1498 aa25.71■■□□□ 1.71
COX17-202ENST00000468918 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
COX17-202ENST00000468918 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
COX17-202ENST00000468918 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
COX17-202ENST00000468918 BAZ1BQ9UIG0 1483 aaKnown RBP25.53■■□□□ 1.68
COX17-202ENST00000468918 WIZO95785 1651 aa25.51■■□□□ 1.67
COX17-202ENST00000468918 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
COX17-202ENST00000468918 ERCC6Q03468 1493 aa25.33■■□□□ 1.65
COX17-202ENST00000468918 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
COX17-202ENST00000468918 NESP48681 1621 aa25.19■■□□□ 1.62
COX17-202ENST00000468918 CUX2O14529 1486 aa25.09■■□□□ 1.61
COX17-202ENST00000468918 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
COX17-202ENST00000468918 DNAJC5Q9H3Z4 198 aa24.96■■□□□ 1.59
COX17-202ENST00000468918 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
COX17-202ENST00000468918 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.58
COX17-202ENST00000468918 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.58
COX17-202ENST00000468918 PDS5BQ9NTI5 1447 aa24.88■■□□□ 1.57
COX17-202ENST00000468918 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
COX17-202ENST00000468918 CFTRP13569 1480 aa24.83■■□□□ 1.56
COX17-202ENST00000468918 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
COX17-202ENST00000468918 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
COX17-202ENST00000468918 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.54
COX17-202ENST00000468918 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
COX17-202ENST00000468918 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
COX17-202ENST00000468918 WDR62O43379 1518 aa24.57■■□□□ 1.52
COX17-202ENST00000468918 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
COX17-202ENST00000468918 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
COX17-202ENST00000468918 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
COX17-202ENST00000468918 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
COX17-202ENST00000468918 CUX1P39880 1505 aa24.17■■□□□ 1.46
COX17-202ENST00000468918 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
COX17-202ENST00000468918 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
COX17-202ENST00000468918 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
COX17-202ENST00000468918 OSCARQ8IYS5 282 aa24.1■■□□□ 1.45
COX17-202ENST00000468918 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
COX17-202ENST00000468918 ZNF608Q9ULD9 1512 aaPredicted RBP24.08■■□□□ 1.45
COX17-202ENST00000468918 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
COX17-202ENST00000468918 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
COX17-202ENST00000468918 EIF4G3O43432 1585 aaKnown RBP24.01■■□□□ 1.43
COX17-202ENST00000468918 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
COX17-202ENST00000468918 BIVM-ERCC5R4GMW8 1640 aa23.98■■□□□ 1.43
COX17-202ENST00000468918 SOGA1O94964 1423 aa23.96■■□□□ 1.43
COX17-202ENST00000468918 TOP2BQ02880 1626 aa23.95■■□□□ 1.43
COX17-202ENST00000468918 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
COX17-202ENST00000468918 WDR97A6NE52 1622 aa23.94■■□□□ 1.42
COX17-202ENST00000468918 AQRO60306 1485 aaKnown RBP eCLIP23.91■■□□□ 1.42
COX17-202ENST00000468918 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
COX17-202ENST00000468918 FBLN2P98095 1184 aa23.84■■□□□ 1.41
COX17-202ENST00000468918 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
COX17-202ENST00000468918 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
COX17-202ENST00000468918 CHD1O14646 1710 aa23.76■■□□□ 1.39
COX17-202ENST00000468918 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
COX17-202ENST00000468918 RIMBP3CA6NJZ7 1639 aa23.71■■□□□ 1.39
COX17-202ENST00000468918 RIMBP3BA6NNM3 1639 aa23.71■■□□□ 1.39
COX17-202ENST00000468918 RIMBP3Q9UFD9 1639 aa23.71■■□□□ 1.39
COX17-202ENST00000468918 GAPVD1Q14C86 1478 aa23.7■■□□□ 1.38
COX17-202ENST00000468918 SNAPC4Q5SXM2 1469 aa23.7■■□□□ 1.38
COX17-202ENST00000468918 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
COX17-202ENST00000468918 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
COX17-202ENST00000468918 ARHGEF11O15085 1522 aa23.63■■□□□ 1.37
COX17-202ENST00000468918 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
COX17-202ENST00000468918 CYB5RLQ6IPT4 315 aa23.58■■□□□ 1.37
COX17-202ENST00000468918 ADAMTS12P58397 1594 aa23.55■■□□□ 1.36
COX17-202ENST00000468918 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
COX17-202ENST00000468918 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
COX17-202ENST00000468918 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
COX17-202ENST00000468918 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
COX17-202ENST00000468918 GRIN2AQ12879 1464 aa23.42■■□□□ 1.34
COX17-202ENST00000468918 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
COX17-202ENST00000468918 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
COX17-202ENST00000468918 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
COX17-202ENST00000468918 TRHP20396 242 aaPredicted RBP23.35■■□□□ 1.33
COX17-202ENST00000468918 IGF1RP08069 1367 aa23.35■■□□□ 1.33
COX17-202ENST00000468918 CUL7Q14999 1698 aa23.33■■□□□ 1.33
COX17-202ENST00000468918 RUSC2Q8N2Y8 1516 aa23.32■■□□□ 1.32
COX17-202ENST00000468918 NUP160Q12769 1436 aa23.31■■□□□ 1.32
COX17-202ENST00000468918 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
COX17-202ENST00000468918 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms