RNA–Protein interactions for RNA: ENST00000468640.1

SDHAF4-202, Transcript of succinate dehydrogenase complex assembly factor 4, humanhuman

TSL 3

Gene SDHAF4, Length 332 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF4-202ENST00000468640 NISCHQ9Y2I1 1504 aa35.3■■■■□ 3.24
SDHAF4-202ENST00000468640 ABCC9O60706 1549 aa32.45■■■□□ 2.78
SDHAF4-202ENST00000468640 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
SDHAF4-202ENST00000468640 DNAJC5BQ9UF47 199 aa31.01■■■□□ 2.55
SDHAF4-202ENST00000468640 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
SDHAF4-202ENST00000468640 NACADO15069 1562 aa30.25■■■□□ 2.43
SDHAF4-202ENST00000468640 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.41
SDHAF4-202ENST00000468640 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.39
SDHAF4-202ENST00000468640 UNC13AQ9UPW8 1703 aa29.84■■■□□ 2.37
SDHAF4-202ENST00000468640 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
SDHAF4-202ENST00000468640 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
SDHAF4-202ENST00000468640 ZCCHC6Q5VYS8 1495 aaKnown RBP29.47■■■□□ 2.31
SDHAF4-202ENST00000468640 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
SDHAF4-202ENST00000468640 DCAF1Q9Y4B6 1507 aa29.32■■■□□ 2.28
SDHAF4-202ENST00000468640 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
SDHAF4-202ENST00000468640 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
SDHAF4-202ENST00000468640 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
SDHAF4-202ENST00000468640 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
SDHAF4-202ENST00000468640 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
SDHAF4-202ENST00000468640 CUX2O14529 1486 aa28.29■■■□□ 2.12
SDHAF4-202ENST00000468640 ERCC6Q03468 1493 aa28.11■■■□□ 2.09
SDHAF4-202ENST00000468640 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
SDHAF4-202ENST00000468640 ATAD2BQ9ULI0 1458 aa27.73■■■□□ 2.03
SDHAF4-202ENST00000468640 NESP48681 1621 aa27.66■■■□□ 2.02
SDHAF4-202ENST00000468640 HMGXB3Q12766 1538 aa27.66■■■□□ 2.02
SDHAF4-202ENST00000468640 SMARCA2P51531 1590 aa27.64■■■□□ 2.01
SDHAF4-202ENST00000468640 THOC2Q8NI27 1593 aaKnown RBP27.52■■■□□ 2
SDHAF4-202ENST00000468640 SMARCA4P51532 1647 aa27.52■■■□□ 2
SDHAF4-202ENST00000468640 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
SDHAF4-202ENST00000468640 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
SDHAF4-202ENST00000468640 LAMC3Q9Y6N6 1575 aa27.41■■□□□ 1.98
SDHAF4-202ENST00000468640 BAZ1AQ9NRL2 1556 aaPredicted RBP27.38■■□□□ 1.97
SDHAF4-202ENST00000468640 PDS5BQ9NTI5 1447 aa27.31■■□□□ 1.96
SDHAF4-202ENST00000468640 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
SDHAF4-202ENST00000468640 PEG3Q9GZU2 1588 aa27.27■■□□□ 1.96
SDHAF4-202ENST00000468640 MROH2BQ7Z745 1585 aa27.14■■□□□ 1.93
SDHAF4-202ENST00000468640 MRC2Q9UBG0 1479 aa27.07■■□□□ 1.92
SDHAF4-202ENST00000468640 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
SDHAF4-202ENST00000468640 WDR62O43379 1518 aa27.02■■□□□ 1.92
SDHAF4-202ENST00000468640 RSF1Q96T23 1441 aaPredicted RBP26.96■■□□□ 1.91
SDHAF4-202ENST00000468640 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
SDHAF4-202ENST00000468640 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
SDHAF4-202ENST00000468640 WIZO95785 1651 aa26.83■■□□□ 1.89
SDHAF4-202ENST00000468640 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
SDHAF4-202ENST00000468640 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
SDHAF4-202ENST00000468640 CFTRP13569 1480 aa26.6■■□□□ 1.85
SDHAF4-202ENST00000468640 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
SDHAF4-202ENST00000468640 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
SDHAF4-202ENST00000468640 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
SDHAF4-202ENST00000468640 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
SDHAF4-202ENST00000468640 ARHGEF11O15085 1522 aa26.43■■□□□ 1.82
SDHAF4-202ENST00000468640 SUPT5HO00267 1087 aaKnown RBP26.39■■□□□ 1.82
SDHAF4-202ENST00000468640 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
SDHAF4-202ENST00000468640 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
SDHAF4-202ENST00000468640 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
SDHAF4-202ENST00000468640 CYB5RLQ6IPT4 315 aa26.3■■□□□ 1.8
SDHAF4-202ENST00000468640 TRHP20396 242 aaPredicted RBP26.25■■□□□ 1.79
SDHAF4-202ENST00000468640 PRDM2Q13029 1718 aa26.23■■□□□ 1.79
SDHAF4-202ENST00000468640 EIF4G3O43432 1585 aaKnown RBP26.15■■□□□ 1.78
SDHAF4-202ENST00000468640 TOPBP1Q92547 1522 aa26.14■■□□□ 1.78
SDHAF4-202ENST00000468640 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
SDHAF4-202ENST00000468640 ABCC8Q09428 1581 aa26.1■■□□□ 1.77
SDHAF4-202ENST00000468640 CHD1O14646 1710 aa26.05■■□□□ 1.76
SDHAF4-202ENST00000468640 FBLN2P98095 1184 aa26.01■■□□□ 1.75
SDHAF4-202ENST00000468640 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
SDHAF4-202ENST00000468640 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.75
SDHAF4-202ENST00000468640 DNMBPQ6XZF7 1577 aa25.99■■□□□ 1.75
SDHAF4-202ENST00000468640 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
SDHAF4-202ENST00000468640 POLA1P09884 1462 aaPredicted RBP25.84■■□□□ 1.73
SDHAF4-202ENST00000468640 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
SDHAF4-202ENST00000468640 TDRD9Q8NDG6 1382 aaKnown RBP25.74■■□□□ 1.71
SDHAF4-202ENST00000468640 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
SDHAF4-202ENST00000468640 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
SDHAF4-202ENST00000468640 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
SDHAF4-202ENST00000468640 SOGA1O94964 1423 aa25.72■■□□□ 1.71
SDHAF4-202ENST00000468640 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
SDHAF4-202ENST00000468640 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
SDHAF4-202ENST00000468640 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
SDHAF4-202ENST00000468640 GRIN2BQ13224 1484 aa25.59■■□□□ 1.69
SDHAF4-202ENST00000468640 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
SDHAF4-202ENST00000468640 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
SDHAF4-202ENST00000468640 GAPVD1Q14C86 1478 aa25.56■■□□□ 1.68
SDHAF4-202ENST00000468640 CUX1P39880 1505 aa25.45■■□□□ 1.66
SDHAF4-202ENST00000468640 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.66
SDHAF4-202ENST00000468640 PBRM1Q86U86 1689 aa25.39■■□□□ 1.65
SDHAF4-202ENST00000468640 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
SDHAF4-202ENST00000468640 BIVM-ERCC5R4GMW8 1640 aa25.35■■□□□ 1.65
SDHAF4-202ENST00000468640 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
SDHAF4-202ENST00000468640 ABCA10Q8WWZ4 1543 aa25.26■■□□□ 1.63
SDHAF4-202ENST00000468640 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
SDHAF4-202ENST00000468640 GRIN2AQ12879 1464 aa25.24■■□□□ 1.63
SDHAF4-202ENST00000468640 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
SDHAF4-202ENST00000468640 NUP160Q12769 1436 aa25.18■■□□□ 1.62
SDHAF4-202ENST00000468640 KIF13AQ9H1H9 1805 aa25.14■■□□□ 1.62
SDHAF4-202ENST00000468640 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
SDHAF4-202ENST00000468640 ADAMTS12P58397 1594 aa25.12■■□□□ 1.61
SDHAF4-202ENST00000468640 FHAD1B1AJZ9 1412 aa25.06■■□□□ 1.6
SDHAF4-202ENST00000468640 FAM69CQ0P6D2 419 aa25.01■■□□□ 1.59
SDHAF4-202ENST00000468640 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
SDHAF4-202ENST00000468640 ABCC10Q5T3U5 1492 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 1020.6 ms