RNA–Protein interactions for RNA: ENST00000468586.5

TM2D1-205, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-205ENST00000468586 AEBP2Q6ZN18 517 aaPredicted RBP21.09■□□□□ 0.97
TM2D1-205ENST00000468586 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
TM2D1-205ENST00000468586 NISCHQ9Y2I1 1504 aa19.16■□□□□ 0.66
TM2D1-205ENST00000468586 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
TM2D1-205ENST00000468586 SENP3Q9H4L4 574 aaPredicted RBP17.98■□□□□ 0.47
TM2D1-205ENST00000468586 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
TM2D1-205ENST00000468586 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
TM2D1-205ENST00000468586 ABCC9O60706 1549 aa16.75■□□□□ 0.27
TM2D1-205ENST00000468586 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
TM2D1-205ENST00000468586 FOXD1Q16676 465 aa16.65■□□□□ 0.26
TM2D1-205ENST00000468586 DNAJC5Q9H3Z4 198 aa16.38■□□□□ 0.21
TM2D1-205ENST00000468586 DCAF8L2P0C7V8 631 aa16.17■□□□□ 0.18
TM2D1-205ENST00000468586 ADRA2BP18089 450 aa15.96■□□□□ 0.15
TM2D1-205ENST00000468586 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.14
TM2D1-205ENST00000468586 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
TM2D1-205ENST00000468586 NACADO15069 1562 aa15.91■□□□□ 0.14
TM2D1-205ENST00000468586 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
TM2D1-205ENST00000468586 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
TM2D1-205ENST00000468586 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
TM2D1-205ENST00000468586 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
TM2D1-205ENST00000468586 POTEDQ86YR6 584 aa15.62■□□□□ 0.09
TM2D1-205ENST00000468586 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
TM2D1-205ENST00000468586 MSH5O43196 834 aa15.44■□□□□ 0.06
TM2D1-205ENST00000468586 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
TM2D1-205ENST00000468586 BICRAQ9NZM4 1560 aa15.34■□□□□ 0.05
TM2D1-205ENST00000468586 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
TM2D1-205ENST00000468586 UNC13AQ9UPW8 1703 aa15.28■□□□□ 0.04
TM2D1-205ENST00000468586 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
TM2D1-205ENST00000468586 TRIM41Q8WV44 630 aa15.08■□□□□ 0
TM2D1-205ENST00000468586 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
TM2D1-205ENST00000468586 CUX2O14529 1486 aa14.96□□□□□ -0.01
TM2D1-205ENST00000468586 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
TM2D1-205ENST00000468586 BAZ1AQ9NRL2 1556 aaPredicted RBP14.82□□□□□ -0.04
TM2D1-205ENST00000468586 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
TM2D1-205ENST00000468586 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
TM2D1-205ENST00000468586 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
TM2D1-205ENST00000468586 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
TM2D1-205ENST00000468586 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
TM2D1-205ENST00000468586 SMARCA2P51531 1590 aa14.69□□□□□ -0.06
TM2D1-205ENST00000468586 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
TM2D1-205ENST00000468586 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
TM2D1-205ENST00000468586 PEG3Q9GZU2 1588 aa14.63□□□□□ -0.07
TM2D1-205ENST00000468586 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
TM2D1-205ENST00000468586 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
TM2D1-205ENST00000468586 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
TM2D1-205ENST00000468586 WIZO95785 1651 aa14.53□□□□□ -0.08
TM2D1-205ENST00000468586 ERCC6Q03468 1493 aa14.51□□□□□ -0.09
TM2D1-205ENST00000468586 MAPK8IP2Q13387 824 aaPredicted RBP14.49□□□□□ -0.09
TM2D1-205ENST00000468586 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
TM2D1-205ENST00000468586 CADPSQ9ULU8 1353 aa14.36□□□□□ -0.11
TM2D1-205ENST00000468586 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
TM2D1-205ENST00000468586 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
TM2D1-205ENST00000468586 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
TM2D1-205ENST00000468586 CNKSR2Q8WXI2 1034 aa14.29□□□□□ -0.12
TM2D1-205ENST00000468586 NESP48681 1621 aa14.29□□□□□ -0.12
TM2D1-205ENST00000468586 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
TM2D1-205ENST00000468586 CFTRP13569 1480 aa14.25□□□□□ -0.13
TM2D1-205ENST00000468586 LAMC3Q9Y6N6 1575 aa14.24□□□□□ -0.13
TM2D1-205ENST00000468586 KCNA4P22459 653 aa14.23□□□□□ -0.13
TM2D1-205ENST00000468586 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
TM2D1-205ENST00000468586 THOC2Q8NI27 1593 aaKnown RBP14.16□□□□□ -0.14
TM2D1-205ENST00000468586 FANCD2Q9BXW9 1451 aa14.13□□□□□ -0.15
TM2D1-205ENST00000468586 CEP164Q9UPV0 1460 aa14.08□□□□□ -0.16
TM2D1-205ENST00000468586 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
TM2D1-205ENST00000468586 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
TM2D1-205ENST00000468586 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
TM2D1-205ENST00000468586 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
TM2D1-205ENST00000468586 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
TM2D1-205ENST00000468586 RIMBP3CA6NJZ7 1639 aa14□□□□□ -0.17
TM2D1-205ENST00000468586 RIMBP3BA6NNM3 1639 aa14□□□□□ -0.17
TM2D1-205ENST00000468586 RIMBP3Q9UFD9 1639 aa14□□□□□ -0.17
TM2D1-205ENST00000468586 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.17
TM2D1-205ENST00000468586 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
TM2D1-205ENST00000468586 ABCC8Q09428 1581 aa13.96□□□□□ -0.18
TM2D1-205ENST00000468586 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
TM2D1-205ENST00000468586 WDR62O43379 1518 aa13.93□□□□□ -0.18
TM2D1-205ENST00000468586 TOPBP1Q92547 1522 aa13.9□□□□□ -0.19
TM2D1-205ENST00000468586 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
TM2D1-205ENST00000468586 ARHGEF11O15085 1522 aa13.85□□□□□ -0.19
TM2D1-205ENST00000468586 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
TM2D1-205ENST00000468586 DNMBPQ6XZF7 1577 aa13.84□□□□□ -0.19
TM2D1-205ENST00000468586 SOGA1O94964 1423 aa13.83□□□□□ -0.2
TM2D1-205ENST00000468586 CUX1P39880 1505 aa13.82□□□□□ -0.2
TM2D1-205ENST00000468586 CYB5RLQ6IPT4 315 aa13.81□□□□□ -0.2
TM2D1-205ENST00000468586 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
TM2D1-205ENST00000468586 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
TM2D1-205ENST00000468586 DCAF8L1A6NGE4 600 aa13.79□□□□□ -0.2
TM2D1-205ENST00000468586 FGD5Q6ZNL6 1462 aa13.78□□□□□ -0.2
TM2D1-205ENST00000468586 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
TM2D1-205ENST00000468586 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
TM2D1-205ENST00000468586 TOP2BQ02880 1626 aa13.71□□□□□ -0.22
TM2D1-205ENST00000468586 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
TM2D1-205ENST00000468586 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
TM2D1-205ENST00000468586 SYNJ1O43426 1573 aa13.7□□□□□ -0.22
TM2D1-205ENST00000468586 ABCA10Q8WWZ4 1543 aa13.66□□□□□ -0.22
TM2D1-205ENST00000468586 TARBP1Q13395 1621 aaKnown RBP13.66□□□□□ -0.22
TM2D1-205ENST00000468586 BIVM-ERCC5R4GMW8 1640 aa13.65□□□□□ -0.22
TM2D1-205ENST00000468586 ARAP1Q96P48 1450 aa13.65□□□□□ -0.22
TM2D1-205ENST00000468586 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
TM2D1-205ENST00000468586 FBLN2P98095 1184 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms