RNA–Protein interactions for RNA: ENST00000468386.2

GMCL1-202, Transcript of germ cell-less, spermatogenesis associated 1, humanhuman

TSL 5

Gene GMCL1, Length 808 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMCL1-202ENST00000468386 NISCHQ9Y2I1 1504 aa58.66■■■■■ 6.98
GMCL1-202ENST00000468386 CCDC180Q9P1Z9 1646 aa52.13■■■■■ 5.94
GMCL1-202ENST00000468386 ABCC9O60706 1549 aa50.86■■■■■ 5.73
GMCL1-202ENST00000468386 DCAF8L2P0C7V8 631 aa49.24■■■■■ 5.47
GMCL1-202ENST00000468386 RB1CC1Q8TDY2 1594 aa49.05■■■■■ 5.44
GMCL1-202ENST00000468386 NACADO15069 1562 aa48.99■■■■■ 5.43
GMCL1-202ENST00000468386 ZCCHC6Q5VYS8 1495 aaKnown RBP48.86■■■■■ 5.41
GMCL1-202ENST00000468386 MYO15BQ96JP2 1530 aa48.67■■■■■ 5.38
GMCL1-202ENST00000468386 DCAF1Q9Y4B6 1507 aa48.52■■■■■ 5.36
GMCL1-202ENST00000468386 UNC13AQ9UPW8 1703 aa47.8■■■■■ 5.24
GMCL1-202ENST00000468386 SCRIBQ14160 1630 aa47.6■■■■■ 5.21
GMCL1-202ENST00000468386 PABPN1Q86U42 306 aaKnown RBP eCLIP47.56■■■■■ 5.2
GMCL1-202ENST00000468386 BICRAQ9NZM4 1560 aa47.33■■■■■ 5.17
GMCL1-202ENST00000468386 SHROOM4Q9ULL8 1493 aa47.02■■■■■ 5.12
GMCL1-202ENST00000468386 DNAJC5BQ9UF47 199 aa46.32■■■■■ 5.01
GMCL1-202ENST00000468386 EIF4G1Q04637 1599 aaKnown RBP46.19■■■■■ 4.99
GMCL1-202ENST00000468386 CC2D2AQ9P2K1 1620 aa45.98■■■■■ 4.95
GMCL1-202ENST00000468386 CECR2Q9BXF3 1484 aa45.68■■■■■ 4.9
GMCL1-202ENST00000468386 BAZ1AQ9NRL2 1556 aaPredicted RBP45.54■■■■■ 4.88
GMCL1-202ENST00000468386 SMARCA4P51532 1647 aa45.5■■■■■ 4.87
GMCL1-202ENST00000468386 SMARCA2P51531 1590 aa45.25■■■■■ 4.83
GMCL1-202ENST00000468386 ATAD2BQ9ULI0 1458 aa45.18■■■■■ 4.82
GMCL1-202ENST00000468386 MROH2BQ7Z745 1585 aa45.18■■■■■ 4.82
GMCL1-202ENST00000468386 NCAPD3P42695 1498 aa45.12■■■■■ 4.81
GMCL1-202ENST00000468386 PEG3Q9GZU2 1588 aa44.98■■■■■ 4.79
GMCL1-202ENST00000468386 HMGXB3Q12766 1538 aa44.96■■■■■ 4.79
GMCL1-202ENST00000468386 BAZ1BQ9UIG0 1483 aaKnown RBP44.94■■■■■ 4.78
GMCL1-202ENST00000468386 WIZO95785 1651 aa44.75■■■■■ 4.75
GMCL1-202ENST00000468386 RSF1Q96T23 1441 aaPredicted RBP44.74■■■■■ 4.75
GMCL1-202ENST00000468386 TOP2AP11388 1531 aaKnown RBP44.31■■■■■ 4.68
GMCL1-202ENST00000468386 LAMC3Q9Y6N6 1575 aa44■■■■■ 4.63
GMCL1-202ENST00000468386 NESP48681 1621 aa43.98■■■■■ 4.63
GMCL1-202ENST00000468386 ERCC6Q03468 1493 aa43.97■■■■■ 4.63
GMCL1-202ENST00000468386 SUPT5HO00267 1087 aaKnown RBP43.97■■■■■ 4.63
GMCL1-202ENST00000468386 CADPSQ9ULU8 1353 aa43.88■■■■■ 4.61
GMCL1-202ENST00000468386 PDS5BQ9NTI5 1447 aa43.76■■■■■ 4.6
GMCL1-202ENST00000468386 CCDC88BA6NC98 1476 aa43.76■■■■■ 4.6
GMCL1-202ENST00000468386 CFTRP13569 1480 aa43.6■■■■■ 4.57
GMCL1-202ENST00000468386 KIF21AQ7Z4S6 1674 aa43.52■■■■■ 4.56
GMCL1-202ENST00000468386 FANCD2Q9BXW9 1451 aa43.4■■■■■ 4.54
GMCL1-202ENST00000468386 PRDM2Q13029 1718 aa43.39■■■■■ 4.54
GMCL1-202ENST00000468386 CEP164Q9UPV0 1460 aa43.38■■■■■ 4.53
GMCL1-202ENST00000468386 CUX2O14529 1486 aa43.32■■■■■ 4.52
GMCL1-202ENST00000468386 THOC2Q8NI27 1593 aaKnown RBP43.26■■■■■ 4.52
GMCL1-202ENST00000468386 MRC2Q9UBG0 1479 aa43.24■■■■■ 4.51
GMCL1-202ENST00000468386 WDR62O43379 1518 aa43.02■■■■■ 4.48
GMCL1-202ENST00000468386 URB2Q14146 1524 aaKnown RBP42.86■■■■■ 4.45
GMCL1-202ENST00000468386 ABCC8Q09428 1581 aa42.82■■■■■ 4.45
GMCL1-202ENST00000468386 TOPBP1Q92547 1522 aa42.69■■■■■ 4.42
GMCL1-202ENST00000468386 DNMBPQ6XZF7 1577 aa42.69■■■■■ 4.42
GMCL1-202ENST00000468386 IFT140Q96RY7 1462 aa42.43■■■■■ 4.38
GMCL1-202ENST00000468386 CUX1P39880 1505 aa42.39■■■■■ 4.38
GMCL1-202ENST00000468386 POLA1P09884 1462 aaPredicted RBP42.32■■■■■ 4.37
GMCL1-202ENST00000468386 WRNQ14191 1432 aaPredicted RBP eCLIP42.29■■■■■ 4.36
GMCL1-202ENST00000468386 FGD5Q6ZNL6 1462 aa42.28■■■■■ 4.36
GMCL1-202ENST00000468386 SOGA1O94964 1423 aa42.24■■■■■ 4.35
GMCL1-202ENST00000468386 TARBP1Q13395 1621 aaKnown RBP42.15■■■■■ 4.34
GMCL1-202ENST00000468386 RAD54L2Q9Y4B4 1467 aa42.13■■■■■ 4.34
GMCL1-202ENST00000468386 ZNF608Q9ULD9 1512 aaPredicted RBP42.12■■■■■ 4.33
GMCL1-202ENST00000468386 TOP2BQ02880 1626 aa42.12■■■■■ 4.33
GMCL1-202ENST00000468386 BIVM-ERCC5R4GMW8 1640 aa42.1■■■■■ 4.33
GMCL1-202ENST00000468386 SYNJ1O43426 1573 aa42.07■■■■■ 4.33
GMCL1-202ENST00000468386 EIF4G3O43432 1585 aaKnown RBP42.02■■■■■ 4.32
GMCL1-202ENST00000468386 AQRO60306 1485 aaKnown RBP eCLIP41.96■■■■■ 4.31
GMCL1-202ENST00000468386 TDRD9Q8NDG6 1382 aaKnown RBP41.94■■■■■ 4.3
GMCL1-202ENST00000468386 WDR97A6NE52 1622 aa41.94■■■■■ 4.3
GMCL1-202ENST00000468386 ABCA10Q8WWZ4 1543 aa41.85■■■■■ 4.29
GMCL1-202ENST00000468386 GAPVD1Q14C86 1478 aa41.74■■■■■ 4.27
GMCL1-202ENST00000468386 DNAJC5Q9H3Z4 198 aa41.74■■■■■ 4.27
GMCL1-202ENST00000468386 GRIN2BQ13224 1484 aa41.72■■■■■ 4.27
GMCL1-202ENST00000468386 FBLN2P98095 1184 aa41.65■■■■■ 4.26
GMCL1-202ENST00000468386 ABCA5Q8WWZ7 1642 aa41.65■■■■■ 4.26
GMCL1-202ENST00000468386 PBRM1Q86U86 1689 aa41.64■■■■■ 4.26
GMCL1-202ENST00000468386 OSCARQ8IYS5 282 aa41.64■■■■■ 4.26
GMCL1-202ENST00000468386 SNAPC4Q5SXM2 1469 aa41.61■■■■■ 4.25
GMCL1-202ENST00000468386 MAGI1Q96QZ7 1491 aaPredicted RBP41.59■■■■■ 4.25
GMCL1-202ENST00000468386 TRIM41Q8WV44 630 aa41.55■■■■■ 4.24
GMCL1-202ENST00000468386 CHMP7Q8WUX9 453 aaPredicted RBP41.52■■■■■ 4.24
GMCL1-202ENST00000468386 CHD1O14646 1710 aa41.49■■■■■ 4.23
GMCL1-202ENST00000468386 KIF27Q86VH2 1401 aa41.44■■■■■ 4.23
GMCL1-202ENST00000468386 SYNJ2O15056 1496 aa41.41■■■■■ 4.22
GMCL1-202ENST00000468386 ERICH3Q5RHP9 1530 aa41.4■■■■■ 4.22
GMCL1-202ENST00000468386 FHAD1B1AJZ9 1412 aa41.27■■■■■ 4.2
GMCL1-202ENST00000468386 ADAMTS12P58397 1594 aa41.27■■■■■ 4.2
GMCL1-202ENST00000468386 GRIN2AQ12879 1464 aa41.15■■■■■ 4.18
GMCL1-202ENST00000468386 CUL7Q14999 1698 aa41.12■■■■■ 4.17
GMCL1-202ENST00000468386 IGF1RP08069 1367 aa41.12■■■■■ 4.17
GMCL1-202ENST00000468386 CHIC1Q5VXU3 224 aa40.99■■■■■ 4.15
GMCL1-202ENST00000468386 CARMIL1Q5VZK9 1371 aa40.98■■■■■ 4.15
GMCL1-202ENST00000468386 CLASP1Q7Z460 1538 aa40.95■■■■■ 4.15
GMCL1-202ENST00000468386 RUSC2Q8N2Y8 1516 aa40.93■■■■■ 4.14
GMCL1-202ENST00000468386 NUP160Q12769 1436 aa40.89■■■■■ 4.14
GMCL1-202ENST00000468386 CEP170Q5SW79 1584 aa40.87■■■■■ 4.13
GMCL1-202ENST00000468386 ARHGEF11O15085 1522 aa40.84■■■■■ 4.13
GMCL1-202ENST00000468386 RIMBP3CA6NJZ7 1639 aa40.83■■■■■ 4.13
GMCL1-202ENST00000468386 RIMBP3BA6NNM3 1639 aa40.83■■■■■ 4.13
GMCL1-202ENST00000468386 RIMBP3Q9UFD9 1639 aa40.83■■■■■ 4.13
GMCL1-202ENST00000468386 EEA1Q15075 1411 aa40.78■■■■■ 4.12
GMCL1-202ENST00000468386 RAPGEF2Q9Y4G8 1499 aa40.76■■■■■ 4.12
GMCL1-202ENST00000468386 CSRNP3Q8WYN3 585 aa40.69■■■■■ 4.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms