RNA–Protein interactions for RNA: ENST00000467980.5

REPIN1-205, Transcript of replication initiator 1, humanhuman

TSL 3

Gene REPIN1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-205ENST00000467980 NISCHQ9Y2I1 1504 aa64.22■■■■■ 7.87
REPIN1-205ENST00000467980 CCDC180Q9P1Z9 1646 aa57■■■■■ 6.72
REPIN1-205ENST00000467980 ABCC9O60706 1549 aa55.74■■■■■ 6.51
REPIN1-205ENST00000467980 DCAF8L2P0C7V8 631 aa53.65■■■■■ 6.18
REPIN1-205ENST00000467980 RB1CC1Q8TDY2 1594 aa53.6■■■■■ 6.17
REPIN1-205ENST00000467980 NACADO15069 1562 aa53.57■■■■■ 6.17
REPIN1-205ENST00000467980 ZCCHC6Q5VYS8 1495 aaKnown RBP53.5■■■■■ 6.15
REPIN1-205ENST00000467980 MYO15BQ96JP2 1530 aa53.26■■■■■ 6.12
REPIN1-205ENST00000467980 DCAF1Q9Y4B6 1507 aa53.09■■■■■ 6.09
REPIN1-205ENST00000467980 UNC13AQ9UPW8 1703 aa52.49■■■■■ 5.99
REPIN1-205ENST00000467980 PABPN1Q86U42 306 aaKnown RBP eCLIP52.14■■■■■ 5.94
REPIN1-205ENST00000467980 SCRIBQ14160 1630 aa52.08■■■■■ 5.93
REPIN1-205ENST00000467980 BICRAQ9NZM4 1560 aa52.06■■■■■ 5.92
REPIN1-205ENST00000467980 SHROOM4Q9ULL8 1493 aa51.37■■■■■ 5.81
REPIN1-205ENST00000467980 DNAJC5BQ9UF47 199 aa51.15■■■■■ 5.78
REPIN1-205ENST00000467980 EIF4G1Q04637 1599 aaKnown RBP50.63■■■■■ 5.7
REPIN1-205ENST00000467980 CC2D2AQ9P2K1 1620 aa50.42■■■■■ 5.66
REPIN1-205ENST00000467980 CECR2Q9BXF3 1484 aa50.08■■■■■ 5.61
REPIN1-205ENST00000467980 SMARCA4P51532 1647 aa49.81■■■■■ 5.56
REPIN1-205ENST00000467980 BAZ1AQ9NRL2 1556 aaPredicted RBP49.72■■■■■ 5.55
REPIN1-205ENST00000467980 MROH2BQ7Z745 1585 aa49.53■■■■■ 5.52
REPIN1-205ENST00000467980 ATAD2BQ9ULI0 1458 aa49.51■■■■■ 5.52
REPIN1-205ENST00000467980 NCAPD3P42695 1498 aa49.45■■■■■ 5.51
REPIN1-205ENST00000467980 SMARCA2P51531 1590 aa49.41■■■■■ 5.5
REPIN1-205ENST00000467980 PEG3Q9GZU2 1588 aa49.29■■■■■ 5.48
REPIN1-205ENST00000467980 HMGXB3Q12766 1538 aa49.19■■■■■ 5.46
REPIN1-205ENST00000467980 BAZ1BQ9UIG0 1483 aaKnown RBP49.08■■■■■ 5.45
REPIN1-205ENST00000467980 WIZO95785 1651 aa49.02■■■■■ 5.44
REPIN1-205ENST00000467980 RSF1Q96T23 1441 aaPredicted RBP48.99■■■■■ 5.43
REPIN1-205ENST00000467980 TOP2AP11388 1531 aaKnown RBP48.43■■■■■ 5.34
REPIN1-205ENST00000467980 NESP48681 1621 aa48.3■■■■■ 5.32
REPIN1-205ENST00000467980 LAMC3Q9Y6N6 1575 aa48.1■■■■■ 5.29
REPIN1-205ENST00000467980 CADPSQ9ULU8 1353 aa48.02■■■■■ 5.28
REPIN1-205ENST00000467980 ERCC6Q03468 1493 aa47.97■■■■■ 5.27
REPIN1-205ENST00000467980 CCDC88BA6NC98 1476 aa47.91■■■■■ 5.26
REPIN1-205ENST00000467980 SUPT5HO00267 1087 aaKnown RBP47.85■■■■■ 5.25
REPIN1-205ENST00000467980 PDS5BQ9NTI5 1447 aa47.77■■■■■ 5.24
REPIN1-205ENST00000467980 CFTRP13569 1480 aa47.76■■■■■ 5.24
REPIN1-205ENST00000467980 KIF21AQ7Z4S6 1674 aa47.71■■■■■ 5.23
REPIN1-205ENST00000467980 THOC2Q8NI27 1593 aaKnown RBP47.5■■■■■ 5.19
REPIN1-205ENST00000467980 FANCD2Q9BXW9 1451 aa47.46■■■■■ 5.19
REPIN1-205ENST00000467980 CUX2O14529 1486 aa47.41■■■■■ 5.18
REPIN1-205ENST00000467980 PRDM2Q13029 1718 aa47.41■■■■■ 5.18
REPIN1-205ENST00000467980 CEP164Q9UPV0 1460 aa47.38■■■■■ 5.17
REPIN1-205ENST00000467980 MRC2Q9UBG0 1479 aa47.29■■■■■ 5.16
REPIN1-205ENST00000467980 WDR62O43379 1518 aa47.14■■■■■ 5.14
REPIN1-205ENST00000467980 URB2Q14146 1524 aaKnown RBP47.02■■■■■ 5.12
REPIN1-205ENST00000467980 TOPBP1Q92547 1522 aa46.74■■■■■ 5.07
REPIN1-205ENST00000467980 ABCC8Q09428 1581 aa46.67■■■■■ 5.06
REPIN1-205ENST00000467980 DNMBPQ6XZF7 1577 aa46.67■■■■■ 5.06
REPIN1-205ENST00000467980 CUX1P39880 1505 aa46.45■■■■■ 5.03
REPIN1-205ENST00000467980 IFT140Q96RY7 1462 aa46.38■■■■■ 5.02
REPIN1-205ENST00000467980 POLA1P09884 1462 aaPredicted RBP46.34■■■■■ 5.01
REPIN1-205ENST00000467980 FGD5Q6ZNL6 1462 aa46.25■■■■■ 5
REPIN1-205ENST00000467980 TARBP1Q13395 1621 aaKnown RBP46.24■■■■■ 4.99
REPIN1-205ENST00000467980 ZNF608Q9ULD9 1512 aaPredicted RBP46.23■■■■■ 4.99
REPIN1-205ENST00000467980 RAD54L2Q9Y4B4 1467 aa46.19■■■■■ 4.98
REPIN1-205ENST00000467980 SOGA1O94964 1423 aa46.16■■■■■ 4.98
REPIN1-205ENST00000467980 WRNQ14191 1432 aaPredicted RBP eCLIP46.14■■■■■ 4.987e-10■■■■■ 33.4
REPIN1-205ENST00000467980 SYNJ1O43426 1573 aa46.08■■■■■ 4.97
REPIN1-205ENST00000467980 BIVM-ERCC5R4GMW8 1640 aa46.06■■■■■ 4.96
REPIN1-205ENST00000467980 TOP2BQ02880 1626 aa46.05■■■■■ 4.96
REPIN1-205ENST00000467980 EIF4G3O43432 1585 aaKnown RBP46.01■■■■■ 4.96
REPIN1-205ENST00000467980 AQRO60306 1485 aaKnown RBP eCLIP45.99■■■■■ 4.952e-10■■■■■ 52.5
REPIN1-205ENST00000467980 DNAJC5Q9H3Z4 198 aa45.91■■■■■ 4.94
REPIN1-205ENST00000467980 TDRD9Q8NDG6 1382 aaKnown RBP45.91■■■■■ 4.94
REPIN1-205ENST00000467980 WDR97A6NE52 1622 aa45.88■■■■■ 4.93
REPIN1-205ENST00000467980 ABCA10Q8WWZ4 1543 aa45.79■■■■■ 4.92
REPIN1-205ENST00000467980 ABCA5Q8WWZ7 1642 aa45.62■■■■■ 4.89
REPIN1-205ENST00000467980 GAPVD1Q14C86 1478 aa45.61■■■■■ 4.89
REPIN1-205ENST00000467980 GRIN2BQ13224 1484 aa45.58■■■■■ 4.89
REPIN1-205ENST00000467980 PBRM1Q86U86 1689 aa45.53■■■■■ 4.88
REPIN1-205ENST00000467980 SNAPC4Q5SXM2 1469 aa45.53■■■■■ 4.88
REPIN1-205ENST00000467980 OSCARQ8IYS5 282 aa45.52■■■■■ 4.88
REPIN1-205ENST00000467980 CHD1O14646 1710 aa45.45■■■■■ 4.87
REPIN1-205ENST00000467980 MAGI1Q96QZ7 1491 aaPredicted RBP45.42■■■■■ 4.86
REPIN1-205ENST00000467980 FBLN2P98095 1184 aa45.39■■■■■ 4.86
REPIN1-205ENST00000467980 SYNJ2O15056 1496 aa45.26■■■■■ 4.84
REPIN1-205ENST00000467980 CHMP7Q8WUX9 453 aaPredicted RBP45.26■■■■■ 4.84
REPIN1-205ENST00000467980 ERICH3Q5RHP9 1530 aa45.23■■■■■ 4.83
REPIN1-205ENST00000467980 ADAMTS12P58397 1594 aa45.16■■■■■ 4.82
REPIN1-205ENST00000467980 KIF27Q86VH2 1401 aa45.16■■■■■ 4.82
REPIN1-205ENST00000467980 TRIM41Q8WV44 630 aa45.15■■■■■ 4.82
REPIN1-205ENST00000467980 FHAD1B1AJZ9 1412 aa45.08■■■■■ 4.81
REPIN1-205ENST00000467980 IGF1RP08069 1367 aa45.03■■■■■ 4.8
REPIN1-205ENST00000467980 GRIN2AQ12879 1464 aa45■■■■■ 4.79
REPIN1-205ENST00000467980 CLASP1Q7Z460 1538 aa44.93■■■■■ 4.78
REPIN1-205ENST00000467980 RUSC2Q8N2Y8 1516 aa44.91■■■■■ 4.78
REPIN1-205ENST00000467980 CUL7Q14999 1698 aa44.83■■■■■ 4.77
REPIN1-205ENST00000467980 NUP160Q12769 1436 aa44.81■■■■■ 4.76
REPIN1-205ENST00000467980 CEP170Q5SW79 1584 aa44.81■■■■■ 4.76
REPIN1-205ENST00000467980 RIMBP3CA6NJZ7 1639 aa44.8■■■■■ 4.76
REPIN1-205ENST00000467980 RIMBP3BA6NNM3 1639 aa44.8■■■■■ 4.76
REPIN1-205ENST00000467980 RIMBP3Q9UFD9 1639 aa44.8■■■■■ 4.76
REPIN1-205ENST00000467980 ARHGEF11O15085 1522 aa44.78■■■■■ 4.76
REPIN1-205ENST00000467980 CARMIL1Q5VZK9 1371 aa44.73■■■■■ 4.75
REPIN1-205ENST00000467980 CHIC1Q5VXU3 224 aa44.73■■■■■ 4.75
REPIN1-205ENST00000467980 RAPGEF2Q9Y4G8 1499 aa44.47■■■■■ 4.71
REPIN1-205ENST00000467980 SHROOM2Q13796 1616 aa44.46■■■■■ 4.71
REPIN1-205ENST00000467980 ARAP1Q96P48 1450 aa44.45■■■■■ 4.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms