RNA–Protein interactions for RNA: ENST00000467566.1

GCC2-207, Transcript of GRIP and coiled-coil domain containing 2, humanhuman

TSL 3

Gene GCC2, Length 477 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC2-207ENST00000467566 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
GCC2-207ENST00000467566 CCDC180Q9P1Z9 1646 aa40.98■■■■■ 4.15
GCC2-207ENST00000467566 ABCC9O60706 1549 aa40.29■■■■■ 4.04
GCC2-207ENST00000467566 ZCCHC6Q5VYS8 1495 aaKnown RBP38.98■■■■□ 3.83
GCC2-207ENST00000467566 DNAJC5BQ9UF47 199 aa38.93■■■■□ 3.82
GCC2-207ENST00000467566 DCAF1Q9Y4B6 1507 aa38.66■■■■□ 3.78
GCC2-207ENST00000467566 MYO15BQ96JP2 1530 aa38.48■■■■□ 3.75
GCC2-207ENST00000467566 DCAF8L2P0C7V8 631 aa38.41■■■■□ 3.74
GCC2-207ENST00000467566 NACADO15069 1562 aa38.31■■■■□ 3.72
GCC2-207ENST00000467566 RB1CC1Q8TDY2 1594 aa38.08■■■■□ 3.69
GCC2-207ENST00000467566 SCRIBQ14160 1630 aa37.34■■■■□ 3.57
GCC2-207ENST00000467566 SHROOM4Q9ULL8 1493 aa37.25■■■■□ 3.55
GCC2-207ENST00000467566 PABPN1Q86U42 306 aaKnown RBP eCLIP37.22■■■■□ 3.55
GCC2-207ENST00000467566 UNC13AQ9UPW8 1703 aa37.05■■■■□ 3.52
GCC2-207ENST00000467566 DNAJC5Q9H3Z4 198 aa36.87■■■■□ 3.49
GCC2-207ENST00000467566 BICRAQ9NZM4 1560 aa36.78■■■■□ 3.48
GCC2-207ENST00000467566 CECR2Q9BXF3 1484 aa36.5■■■■□ 3.43
GCC2-207ENST00000467566 CC2D2AQ9P2K1 1620 aa36.4■■■■□ 3.42
GCC2-207ENST00000467566 BAZ1AQ9NRL2 1556 aaPredicted RBP36.06■■■■□ 3.36
GCC2-207ENST00000467566 EIF4G1Q04637 1599 aaKnown RBP36.01■■■■□ 3.35
GCC2-207ENST00000467566 SMARCA4P51532 1647 aa35.87■■■■□ 3.33
GCC2-207ENST00000467566 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
GCC2-207ENST00000467566 MROH2BQ7Z745 1585 aa35.81■■■■□ 3.32
GCC2-207ENST00000467566 SUPT5HO00267 1087 aaKnown RBP35.64■■■■□ 3.3
GCC2-207ENST00000467566 PEG3Q9GZU2 1588 aa35.57■■■■□ 3.28
GCC2-207ENST00000467566 SMARCA2P51531 1590 aa35.52■■■■□ 3.28
GCC2-207ENST00000467566 WIZO95785 1651 aa35.45■■■■□ 3.27
GCC2-207ENST00000467566 CUX2O14529 1486 aa35.44■■■■□ 3.26
GCC2-207ENST00000467566 ATAD2BQ9ULI0 1458 aa35.44■■■■□ 3.26
GCC2-207ENST00000467566 NCAPD3P42695 1498 aa35.32■■■■□ 3.24
GCC2-207ENST00000467566 TOP2AP11388 1531 aaKnown RBP35.25■■■■□ 3.23
GCC2-207ENST00000467566 HMGXB3Q12766 1538 aa35.24■■■■□ 3.23
GCC2-207ENST00000467566 BAZ1BQ9UIG0 1483 aaKnown RBP35.23■■■■□ 3.23
GCC2-207ENST00000467566 ERCC6Q03468 1493 aa34.96■■■■□ 3.19
GCC2-207ENST00000467566 CCDC88BA6NC98 1476 aa34.78■■■■□ 3.16
GCC2-207ENST00000467566 TRIM41Q8WV44 630 aa34.58■■■■□ 3.13
GCC2-207ENST00000467566 CADPSQ9ULU8 1353 aa34.34■■■■□ 3.09
GCC2-207ENST00000467566 CFTRP13569 1480 aa34.33■■■■□ 3.09
GCC2-207ENST00000467566 THOC2Q8NI27 1593 aaKnown RBP34.23■■■■□ 3.07
GCC2-207ENST00000467566 LAMC3Q9Y6N6 1575 aa34.23■■■■□ 3.07
GCC2-207ENST00000467566 NESP48681 1621 aa34.2■■■■□ 3.07
GCC2-207ENST00000467566 PRDM2Q13029 1718 aa34.13■■■■□ 3.05
GCC2-207ENST00000467566 PDS5BQ9NTI5 1447 aa34■■■■□ 3.03
GCC2-207ENST00000467566 CHIC1Q5VXU3 224 aa33.91■■■■□ 3.02
GCC2-207ENST00000467566 FANCD2Q9BXW9 1451 aa33.9■■■■□ 3.02
GCC2-207ENST00000467566 CEP164Q9UPV0 1460 aa33.8■■■■□ 3
GCC2-207ENST00000467566 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
GCC2-207ENST00000467566 WRNQ14191 1432 aaPredicted RBP eCLIP33.79■■■■□ 3
GCC2-207ENST00000467566 ABCC8Q09428 1581 aa33.74■■■□□ 2.99
GCC2-207ENST00000467566 TOP2BQ02880 1626 aa33.6■■■□□ 2.97
GCC2-207ENST00000467566 BIVM-ERCC5R4GMW8 1640 aa33.57■■■□□ 2.96
GCC2-207ENST00000467566 SYNJ1O43426 1573 aa33.55■■■□□ 2.96
GCC2-207ENST00000467566 CUX1P39880 1505 aa33.55■■■□□ 2.96
GCC2-207ENST00000467566 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
GCC2-207ENST00000467566 MRC2Q9UBG0 1479 aa33.53■■■□□ 2.96
GCC2-207ENST00000467566 OSCARQ8IYS5 282 aa33.52■■■□□ 2.96
GCC2-207ENST00000467566 WDR62O43379 1518 aa33.48■■■□□ 2.95
GCC2-207ENST00000467566 TOPBP1Q92547 1522 aa33.47■■■□□ 2.95
GCC2-207ENST00000467566 URB2Q14146 1524 aaKnown RBP33.45■■■□□ 2.95
GCC2-207ENST00000467566 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
GCC2-207ENST00000467566 POLA1P09884 1462 aaPredicted RBP33.25■■■□□ 2.91
GCC2-207ENST00000467566 RIMBP3CA6NJZ7 1639 aa33.23■■■□□ 2.91
GCC2-207ENST00000467566 RIMBP3BA6NNM3 1639 aa33.23■■■□□ 2.91
GCC2-207ENST00000467566 RIMBP3Q9UFD9 1639 aa33.23■■■□□ 2.91
GCC2-207ENST00000467566 EEA1Q15075 1411 aa33.19■■■□□ 2.9
GCC2-207ENST00000467566 SOGA1O94964 1423 aa33.17■■■□□ 2.9
GCC2-207ENST00000467566 ABCA10Q8WWZ4 1543 aa33.09■■■□□ 2.89
GCC2-207ENST00000467566 IFT140Q96RY7 1462 aa33.07■■■□□ 2.88
GCC2-207ENST00000467566 KIF27Q86VH2 1401 aa33.05■■■□□ 2.88
GCC2-207ENST00000467566 RAD54L2Q9Y4B4 1467 aa33.03■■■□□ 2.88
GCC2-207ENST00000467566 TARBP1Q13395 1621 aaKnown RBP32.99■■■□□ 2.87
GCC2-207ENST00000467566 ARHGEF11O15085 1522 aa32.98■■■□□ 2.87
GCC2-207ENST00000467566 WDR97A6NE52 1622 aa32.96■■■□□ 2.87
GCC2-207ENST00000467566 AEBP2Q6ZN18 517 aaPredicted RBP32.94■■■□□ 2.86
GCC2-207ENST00000467566 CSRNP3Q8WYN3 585 aa32.89■■■□□ 2.86
GCC2-207ENST00000467566 RUSC2Q8N2Y8 1516 aa32.87■■■□□ 2.85
GCC2-207ENST00000467566 FAM9AQ8IZU1 332 aaPredicted RBP32.86■■■□□ 2.85
GCC2-207ENST00000467566 TRHP20396 242 aaPredicted RBP32.83■■■□□ 2.85
GCC2-207ENST00000467566 ABCA5Q8WWZ7 1642 aa32.81■■■□□ 2.84
GCC2-207ENST00000467566 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
GCC2-207ENST00000467566 TDRD9Q8NDG6 1382 aaKnown RBP32.79■■■□□ 2.84
GCC2-207ENST00000467566 CYB5RLQ6IPT4 315 aa32.75■■■□□ 2.83
GCC2-207ENST00000467566 ERICH3Q5RHP9 1530 aa32.74■■■□□ 2.83
GCC2-207ENST00000467566 IGF1RP08069 1367 aa32.73■■■□□ 2.83
GCC2-207ENST00000467566 ZNF608Q9ULD9 1512 aaPredicted RBP32.69■■■□□ 2.82
GCC2-207ENST00000467566 GRIN2BQ13224 1484 aa32.68■■■□□ 2.82
GCC2-207ENST00000467566 AQRO60306 1485 aaKnown RBP eCLIP32.67■■■□□ 2.82
GCC2-207ENST00000467566 EIF4G3O43432 1585 aaKnown RBP32.65■■■□□ 2.82
GCC2-207ENST00000467566 KIF21BO75037 1637 aa32.65■■■□□ 2.82
GCC2-207ENST00000467566 CUL7Q14999 1698 aa32.63■■■□□ 2.81
GCC2-207ENST00000467566 PRXQ9BXM0 1461 aa32.63■■■□□ 2.81
GCC2-207ENST00000467566 PBRM1Q86U86 1689 aa32.59■■■□□ 2.81
GCC2-207ENST00000467566 CARMIL1Q5VZK9 1371 aa32.58■■■□□ 2.81
GCC2-207ENST00000467566 GOLGA3Q08378 1498 aa32.56■■■□□ 2.8
GCC2-207ENST00000467566 ARAP1Q96P48 1450 aa32.54■■■□□ 2.8
GCC2-207ENST00000467566 RAPGEF2Q9Y4G8 1499 aa32.52■■■□□ 2.8
GCC2-207ENST00000467566 MAGI1Q96QZ7 1491 aaPredicted RBP32.5■■■□□ 2.79
GCC2-207ENST00000467566 FHAD1B1AJZ9 1412 aa32.5■■■□□ 2.79
GCC2-207ENST00000467566 ADAMTS12P58397 1594 aa32.43■■■□□ 2.78
GCC2-207ENST00000467566 LOC105371045A0A1W2PR82 267 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms