RNA–Protein interactions for RNA: ENST00000467093.1

KDM5C-210, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-210ENST00000467093 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.77
KDM5C-210ENST00000467093 ABCC9O60706 1549 aa19.83■□□□□ 0.77
KDM5C-210ENST00000467093 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
KDM5C-210ENST00000467093 DNAJC5Q9H3Z4 198 aa19.28■□□□□ 0.68
KDM5C-210ENST00000467093 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
KDM5C-210ENST00000467093 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
KDM5C-210ENST00000467093 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
KDM5C-210ENST00000467093 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
KDM5C-210ENST00000467093 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
KDM5C-210ENST00000467093 NACADO15069 1562 aa17.75■□□□□ 0.43
KDM5C-210ENST00000467093 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
KDM5C-210ENST00000467093 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
KDM5C-210ENST00000467093 CUX2O14529 1486 aa17.63■□□□□ 0.41
KDM5C-210ENST00000467093 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
KDM5C-210ENST00000467093 UNC13AQ9UPW8 1703 aa17.53■□□□□ 0.4
KDM5C-210ENST00000467093 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
KDM5C-210ENST00000467093 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
KDM5C-210ENST00000467093 SHROOM4Q9ULL8 1493 aa17.33■□□□□ 0.37
KDM5C-210ENST00000467093 ERCC6Q03468 1493 aa17.29■□□□□ 0.36
KDM5C-210ENST00000467093 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.32
KDM5C-210ENST00000467093 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
KDM5C-210ENST00000467093 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
KDM5C-210ENST00000467093 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
KDM5C-210ENST00000467093 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
KDM5C-210ENST00000467093 NESP48681 1621 aa16.59■□□□□ 0.25
KDM5C-210ENST00000467093 THOC2Q8NI27 1593 aaKnown RBP16.57■□□□□ 0.24
KDM5C-210ENST00000467093 CYB5RLQ6IPT4 315 aa16.49■□□□□ 0.23
KDM5C-210ENST00000467093 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
KDM5C-210ENST00000467093 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
KDM5C-210ENST00000467093 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
KDM5C-210ENST00000467093 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
KDM5C-210ENST00000467093 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
KDM5C-210ENST00000467093 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
KDM5C-210ENST00000467093 PDS5BQ9NTI5 1447 aa16.34■□□□□ 0.21
KDM5C-210ENST00000467093 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
KDM5C-210ENST00000467093 ARHGEF11O15085 1522 aa16.31■□□□□ 0.2
KDM5C-210ENST00000467093 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
KDM5C-210ENST00000467093 LAMC3Q9Y6N6 1575 aa16.24■□□□□ 0.19
KDM5C-210ENST00000467093 KIF21AQ7Z4S6 1674 aa16.19■□□□□ 0.18
KDM5C-210ENST00000467093 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
KDM5C-210ENST00000467093 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
KDM5C-210ENST00000467093 WDR62O43379 1518 aa16.12■□□□□ 0.17
KDM5C-210ENST00000467093 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
KDM5C-210ENST00000467093 ARAP1Q96P48 1450 aa16.04■□□□□ 0.16
KDM5C-210ENST00000467093 BAZ1BQ9UIG0 1483 aaKnown RBP16■□□□□ 0.15
KDM5C-210ENST00000467093 CADPSQ9ULU8 1353 aa15.95■□□□□ 0.14
KDM5C-210ENST00000467093 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
KDM5C-210ENST00000467093 FBXO41Q8TF61 875 aa15.86■□□□□ 0.13
KDM5C-210ENST00000467093 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
KDM5C-210ENST00000467093 LMTK3Q96Q04 1460 aa15.84■□□□□ 0.13
KDM5C-210ENST00000467093 KDM4FA0A1W2PPD8 638 aa15.82■□□□□ 0.12
KDM5C-210ENST00000467093 SOCS7O14512 581 aa15.81■□□□□ 0.12
KDM5C-210ENST00000467093 FBLN2P98095 1184 aa15.79■□□□□ 0.12
KDM5C-210ENST00000467093 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
KDM5C-210ENST00000467093 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
KDM5C-210ENST00000467093 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
KDM5C-210ENST00000467093 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
KDM5C-210ENST00000467093 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
KDM5C-210ENST00000467093 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
KDM5C-210ENST00000467093 ILDR2Q71H61 639 aa15.59■□□□□ 0.09
KDM5C-210ENST00000467093 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
KDM5C-210ENST00000467093 CHD1O14646 1710 aa15.51■□□□□ 0.07
KDM5C-210ENST00000467093 DISP3Q9P2K9 1392 aa15.51■□□□□ 0.07
KDM5C-210ENST00000467093 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
KDM5C-210ENST00000467093 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
KDM5C-210ENST00000467093 AQRO60306 1485 aaKnown RBP eCLIP15.43■□□□□ 0.064e-6■■■■□ 20.6
KDM5C-210ENST00000467093 EIF4G3O43432 1585 aaKnown RBP15.43■□□□□ 0.06
KDM5C-210ENST00000467093 CHMP7Q8WUX9 453 aaPredicted RBP15.42■□□□□ 0.06
KDM5C-210ENST00000467093 CFTRP13569 1480 aa15.41■□□□□ 0.06
KDM5C-210ENST00000467093 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
KDM5C-210ENST00000467093 FAM69CQ0P6D2 419 aa15.37■□□□□ 0.05
KDM5C-210ENST00000467093 CLASP1Q7Z460 1538 aa15.37■□□□□ 0.05
KDM5C-210ENST00000467093 MROH2BQ7Z745 1585 aa15.33■□□□□ 0.05
KDM5C-210ENST00000467093 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
KDM5C-210ENST00000467093 ADGRL1O94910 1474 aa15.31■□□□□ 0.04
KDM5C-210ENST00000467093 KDM6BO15054 1643 aa15.28■□□□□ 0.04
KDM5C-210ENST00000467093 TOPBP1Q92547 1522 aa15.23■□□□□ 0.03
KDM5C-210ENST00000467093 KIF13AQ9H1H9 1805 aa15.23■□□□□ 0.03
KDM5C-210ENST00000467093 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
KDM5C-210ENST00000467093 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
KDM5C-210ENST00000467093 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
KDM5C-210ENST00000467093 ABCC10Q5T3U5 1492 aa15.17■□□□□ 0.02
KDM5C-210ENST00000467093 TDRD9Q8NDG6 1382 aaKnown RBP15.17■□□□□ 0.02
KDM5C-210ENST00000467093 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
KDM5C-210ENST00000467093 MAGI1Q96QZ7 1491 aaPredicted RBP15.09■□□□□ 0.01
KDM5C-210ENST00000467093 CERKQ8TCT0 537 aa15.04■□□□□ -0
KDM5C-210ENST00000467093 DNMBPQ6XZF7 1577 aa15.02■□□□□ -0
KDM5C-210ENST00000467093 SPATA31D1Q6ZQQ2 1576 aa15.02■□□□□ -0
KDM5C-210ENST00000467093 SOGA1O94964 1423 aa15□□□□□ -0.01
KDM5C-210ENST00000467093 POLA1P09884 1462 aaPredicted RBP15□□□□□ -0.01
KDM5C-210ENST00000467093 RAD54L2Q9Y4B4 1467 aa15□□□□□ -0.01
KDM5C-210ENST00000467093 GRIN2BQ13224 1484 aa14.99□□□□□ -0.01
KDM5C-210ENST00000467093 WIZO95785 1651 aa14.99□□□□□ -0.01
KDM5C-210ENST00000467093 DIP2BQ9P265 1576 aa14.98□□□□□ -0.01
KDM5C-210ENST00000467093 MAPKBP1O60336 1514 aa14.94□□□□□ -0.02
KDM5C-210ENST00000467093 TSPOAP1O95153 1857 aa14.93□□□□□ -0.02
KDM5C-210ENST00000467093 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
KDM5C-210ENST00000467093 TOP2BQ02880 1626 aa14.91□□□□□ -0.02
KDM5C-210ENST00000467093 WDR97A6NE52 1622 aa14.88□□□□□ -0.03
KDM5C-210ENST00000467093 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms