RNA–Protein interactions for RNA: ENST00000466987.1

PSMD2-211, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 2

Gene PSMD2, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-211ENST00000466987 NISCHQ9Y2I1 1504 aa25.06■■□□□ 1.6
PSMD2-211ENST00000466987 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
PSMD2-211ENST00000466987 ABCC9O60706 1549 aa21.38■■□□□ 1.01
PSMD2-211ENST00000466987 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
PSMD2-211ENST00000466987 DCAF8L2P0C7V8 631 aa20.81■□□□□ 0.92
PSMD2-211ENST00000466987 NACADO15069 1562 aa20.74■□□□□ 0.91
PSMD2-211ENST00000466987 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
PSMD2-211ENST00000466987 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
PSMD2-211ENST00000466987 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
PSMD2-211ENST00000466987 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
PSMD2-211ENST00000466987 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
PSMD2-211ENST00000466987 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
PSMD2-211ENST00000466987 BICRAQ9NZM4 1560 aa20.05■□□□□ 0.8
PSMD2-211ENST00000466987 SHROOM4Q9ULL8 1493 aa20.04■□□□□ 0.8
PSMD2-211ENST00000466987 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
PSMD2-211ENST00000466987 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
PSMD2-211ENST00000466987 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
PSMD2-211ENST00000466987 CECR2Q9BXF3 1484 aa19.49■□□□□ 0.71
PSMD2-211ENST00000466987 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
PSMD2-211ENST00000466987 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
PSMD2-211ENST00000466987 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
PSMD2-211ENST00000466987 MROH2BQ7Z745 1585 aa19.33■□□□□ 0.69
PSMD2-211ENST00000466987 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
PSMD2-211ENST00000466987 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
PSMD2-211ENST00000466987 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
PSMD2-211ENST00000466987 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
PSMD2-211ENST00000466987 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
PSMD2-211ENST00000466987 WIZO95785 1651 aa19.16■□□□□ 0.66
PSMD2-211ENST00000466987 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
PSMD2-211ENST00000466987 HMGXB3Q12766 1538 aa19.08■□□□□ 0.64
PSMD2-211ENST00000466987 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
PSMD2-211ENST00000466987 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
PSMD2-211ENST00000466987 TOP2AP11388 1531 aaKnown RBP18.97■□□□□ 0.63
PSMD2-211ENST00000466987 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
PSMD2-211ENST00000466987 NESP48681 1621 aa18.59■□□□□ 0.57
PSMD2-211ENST00000466987 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
PSMD2-211ENST00000466987 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
PSMD2-211ENST00000466987 CFTRP13569 1480 aa18.53■□□□□ 0.56
PSMD2-211ENST00000466987 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
PSMD2-211ENST00000466987 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
PSMD2-211ENST00000466987 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
PSMD2-211ENST00000466987 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
PSMD2-211ENST00000466987 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
PSMD2-211ENST00000466987 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
PSMD2-211ENST00000466987 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
PSMD2-211ENST00000466987 MRC2Q9UBG0 1479 aa18.25■□□□□ 0.51
PSMD2-211ENST00000466987 WDR62O43379 1518 aa18.18■□□□□ 0.5
PSMD2-211ENST00000466987 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
PSMD2-211ENST00000466987 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
PSMD2-211ENST00000466987 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
PSMD2-211ENST00000466987 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
PSMD2-211ENST00000466987 WRNQ14191 1432 aaPredicted RBP eCLIP18.12■□□□□ 0.49
PSMD2-211ENST00000466987 CUX1P39880 1505 aa18.12■□□□□ 0.49
PSMD2-211ENST00000466987 SYNJ1O43426 1573 aa18.08■□□□□ 0.49
PSMD2-211ENST00000466987 CUX2O14529 1486 aa18.07■□□□□ 0.48
PSMD2-211ENST00000466987 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
PSMD2-211ENST00000466987 BIVM-ERCC5R4GMW8 1640 aa18.05■□□□□ 0.48
PSMD2-211ENST00000466987 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
PSMD2-211ENST00000466987 POLA1P09884 1462 aaPredicted RBP18■□□□□ 0.47
PSMD2-211ENST00000466987 IFT140Q96RY7 1462 aa17.94■□□□□ 0.46
PSMD2-211ENST00000466987 RAD54L2Q9Y4B4 1467 aa17.92■□□□□ 0.46
PSMD2-211ENST00000466987 SOGA1O94964 1423 aa17.91■□□□□ 0.46
PSMD2-211ENST00000466987 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
PSMD2-211ENST00000466987 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
PSMD2-211ENST00000466987 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
PSMD2-211ENST00000466987 ABCA10Q8WWZ4 1543 aa17.83■□□□□ 0.45
PSMD2-211ENST00000466987 ZNF608Q9ULD9 1512 aaPredicted RBP17.83■□□□□ 0.45
PSMD2-211ENST00000466987 EIF4G3O43432 1585 aaKnown RBP17.81■□□□□ 0.44
PSMD2-211ENST00000466987 TDRD9Q8NDG6 1382 aaKnown RBP17.78■□□□□ 0.44
PSMD2-211ENST00000466987 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
PSMD2-211ENST00000466987 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.433e-7■■■■■ 33
PSMD2-211ENST00000466987 GAPVD1Q14C86 1478 aa17.73■□□□□ 0.43
PSMD2-211ENST00000466987 PBRM1Q86U86 1689 aa17.72■□□□□ 0.43
PSMD2-211ENST00000466987 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
PSMD2-211ENST00000466987 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
PSMD2-211ENST00000466987 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
PSMD2-211ENST00000466987 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
PSMD2-211ENST00000466987 ERICH3Q5RHP9 1530 aa17.63■□□□□ 0.41
PSMD2-211ENST00000466987 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
PSMD2-211ENST00000466987 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
PSMD2-211ENST00000466987 MAGI1Q96QZ7 1491 aaPredicted RBP17.6■□□□□ 0.41
PSMD2-211ENST00000466987 ADAMTS12P58397 1594 aa17.58■□□□□ 0.41
PSMD2-211ENST00000466987 EEA1Q15075 1411 aa17.58■□□□□ 0.41
PSMD2-211ENST00000466987 CUL7Q14999 1698 aa17.57■□□□□ 0.4
PSMD2-211ENST00000466987 IGF1RP08069 1367 aa17.56■□□□□ 0.4
PSMD2-211ENST00000466987 FAM9AQ8IZU1 332 aaPredicted RBP17.55■□□□□ 0.4
PSMD2-211ENST00000466987 CHD1O14646 1710 aa17.53■□□□□ 0.4
PSMD2-211ENST00000466987 SYNJ2O15056 1496 aa17.53■□□□□ 0.4
PSMD2-211ENST00000466987 FHAD1B1AJZ9 1412 aa17.53■□□□□ 0.4
PSMD2-211ENST00000466987 FBLN2P98095 1184 aa17.49■□□□□ 0.39
PSMD2-211ENST00000466987 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
PSMD2-211ENST00000466987 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
PSMD2-211ENST00000466987 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
PSMD2-211ENST00000466987 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
PSMD2-211ENST00000466987 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
PSMD2-211ENST00000466987 RAPGEF2Q9Y4G8 1499 aa17.44■□□□□ 0.38
PSMD2-211ENST00000466987 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
PSMD2-211ENST00000466987 KIF21BO75037 1637 aa17.4■□□□□ 0.38
PSMD2-211ENST00000466987 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
PSMD2-211ENST00000466987 NUP160Q12769 1436 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms