RNA–Protein interactions for RNA: ENST00000466905.4

SSR2-203, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-203ENST00000466905 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.07
SSR2-203ENST00000466905 CCDC180Q9P1Z9 1646 aa19.26■□□□□ 0.67
SSR2-203ENST00000466905 ABCC9O60706 1549 aa18.93■□□□□ 0.62
SSR2-203ENST00000466905 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
SSR2-203ENST00000466905 DCAF8L2P0C7V8 631 aa18.16■□□□□ 0.5
SSR2-203ENST00000466905 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
SSR2-203ENST00000466905 NACADO15069 1562 aa18.11■□□□□ 0.49
SSR2-203ENST00000466905 RB1CC1Q8TDY2 1594 aa18.1■□□□□ 0.49
SSR2-203ENST00000466905 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
SSR2-203ENST00000466905 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
SSR2-203ENST00000466905 CHIC1Q5VXU3 224 aa17.9■□□□□ 0.46
SSR2-203ENST00000466905 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
SSR2-203ENST00000466905 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
SSR2-203ENST00000466905 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
SSR2-203ENST00000466905 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
SSR2-203ENST00000466905 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
SSR2-203ENST00000466905 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
SSR2-203ENST00000466905 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
SSR2-203ENST00000466905 CC2D2AQ9P2K1 1620 aa17.04■□□□□ 0.32
SSR2-203ENST00000466905 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
SSR2-203ENST00000466905 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
SSR2-203ENST00000466905 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
SSR2-203ENST00000466905 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
SSR2-203ENST00000466905 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
SSR2-203ENST00000466905 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
SSR2-203ENST00000466905 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
SSR2-203ENST00000466905 PEG3Q9GZU2 1588 aa16.65■□□□□ 0.26
SSR2-203ENST00000466905 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
SSR2-203ENST00000466905 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
SSR2-203ENST00000466905 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
SSR2-203ENST00000466905 WIZO95785 1651 aa16.53■□□□□ 0.24
SSR2-203ENST00000466905 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
SSR2-203ENST00000466905 NESP48681 1621 aa16.31■□□□□ 0.2
SSR2-203ENST00000466905 ERCC6Q03468 1493 aa16.3■□□□□ 0.2
SSR2-203ENST00000466905 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
SSR2-203ENST00000466905 LAMC3Q9Y6N6 1575 aa16.25■□□□□ 0.19
SSR2-203ENST00000466905 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
SSR2-203ENST00000466905 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
SSR2-203ENST00000466905 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
SSR2-203ENST00000466905 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
SSR2-203ENST00000466905 CUX2O14529 1486 aa16.14■□□□□ 0.17
SSR2-203ENST00000466905 CFTRP13569 1480 aa16.14■□□□□ 0.17
SSR2-203ENST00000466905 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
SSR2-203ENST00000466905 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
SSR2-203ENST00000466905 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
SSR2-203ENST00000466905 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
SSR2-203ENST00000466905 PRDM2Q13029 1718 aa16■□□□□ 0.15
SSR2-203ENST00000466905 THOC2Q8NI27 1593 aaKnown RBP15.98■□□□□ 0.15
SSR2-203ENST00000466905 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
SSR2-203ENST00000466905 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
SSR2-203ENST00000466905 WDR62O43379 1518 aa15.89■□□□□ 0.13
SSR2-203ENST00000466905 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
SSR2-203ENST00000466905 ABCC8Q09428 1581 aa15.83■□□□□ 0.13
SSR2-203ENST00000466905 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
SSR2-203ENST00000466905 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
SSR2-203ENST00000466905 IFT140Q96RY7 1462 aa15.68■□□□□ 0.1
SSR2-203ENST00000466905 CUX1P39880 1505 aa15.68■□□□□ 0.1
SSR2-203ENST00000466905 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
SSR2-203ENST00000466905 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
SSR2-203ENST00000466905 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
SSR2-203ENST00000466905 SOGA1O94964 1423 aa15.6■□□□□ 0.09
SSR2-203ENST00000466905 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
SSR2-203ENST00000466905 TOP2BQ02880 1626 aa15.58■□□□□ 0.09
SSR2-203ENST00000466905 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.08
SSR2-203ENST00000466905 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
SSR2-203ENST00000466905 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
SSR2-203ENST00000466905 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
SSR2-203ENST00000466905 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
SSR2-203ENST00000466905 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
SSR2-203ENST00000466905 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
SSR2-203ENST00000466905 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
SSR2-203ENST00000466905 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
SSR2-203ENST00000466905 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
SSR2-203ENST00000466905 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
SSR2-203ENST00000466905 FBLN2P98095 1184 aa15.45■□□□□ 0.06
SSR2-203ENST00000466905 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
SSR2-203ENST00000466905 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
SSR2-203ENST00000466905 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
SSR2-203ENST00000466905 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
SSR2-203ENST00000466905 MAGI1Q96QZ7 1491 aaPredicted RBP15.37■□□□□ 0.05
SSR2-203ENST00000466905 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
SSR2-203ENST00000466905 KIF27Q86VH2 1401 aa15.34■□□□□ 0.05
SSR2-203ENST00000466905 CHMP7Q8WUX9 453 aaPredicted RBP15.32■□□□□ 0.04
SSR2-203ENST00000466905 ERICH3Q5RHP9 1530 aa15.32■□□□□ 0.04
SSR2-203ENST00000466905 SYNJ2O15056 1496 aa15.3■□□□□ 0.04
SSR2-203ENST00000466905 CHD1O14646 1710 aa15.27■□□□□ 0.04
SSR2-203ENST00000466905 CYB5RLQ6IPT4 315 aa15.27■□□□□ 0.04
SSR2-203ENST00000466905 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
SSR2-203ENST00000466905 ADAMTS12P58397 1594 aa15.26■□□□□ 0.03
SSR2-203ENST00000466905 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
SSR2-203ENST00000466905 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
SSR2-203ENST00000466905 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
SSR2-203ENST00000466905 IGF1RP08069 1367 aa15.23■□□□□ 0.03
SSR2-203ENST00000466905 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
SSR2-203ENST00000466905 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
SSR2-203ENST00000466905 CUL7Q14999 1698 aa15.19■□□□□ 0.02
SSR2-203ENST00000466905 CARMIL1Q5VZK9 1371 aa15.16■□□□□ 0.02
SSR2-203ENST00000466905 RUSC2Q8N2Y8 1516 aa15.14■□□□□ 0.01
SSR2-203ENST00000466905 NUP160Q12769 1436 aa15.13■□□□□ 0.01
SSR2-203ENST00000466905 CLASP1Q7Z460 1538 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms