RNA–Protein interactions for RNA: ENST00000466494.6

IDH3B-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) beta, humanhuman

TSL 2

Gene IDH3B, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3B-204ENST00000466494 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
IDH3B-204ENST00000466494 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
IDH3B-204ENST00000466494 ABCC9O60706 1549 aa23.64■■□□□ 1.37
IDH3B-204ENST00000466494 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
IDH3B-204ENST00000466494 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
IDH3B-204ENST00000466494 DNAJC5Q9H3Z4 198 aa22.62■■□□□ 1.21
IDH3B-204ENST00000466494 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
IDH3B-204ENST00000466494 RB1CC1Q8TDY2 1594 aa21.81■■□□□ 1.08
IDH3B-204ENST00000466494 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
IDH3B-204ENST00000466494 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
IDH3B-204ENST00000466494 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
IDH3B-204ENST00000466494 CC2D2AQ9P2K1 1620 aa21.29■■□□□ 1
IDH3B-204ENST00000466494 NACADO15069 1562 aa21.28■■□□□ 1
IDH3B-204ENST00000466494 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
IDH3B-204ENST00000466494 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
IDH3B-204ENST00000466494 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
IDH3B-204ENST00000466494 CUX2O14529 1486 aa20.94■□□□□ 0.94
IDH3B-204ENST00000466494 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
IDH3B-204ENST00000466494 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
IDH3B-204ENST00000466494 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
IDH3B-204ENST00000466494 ERCC6Q03468 1493 aa20.48■□□□□ 0.87
IDH3B-204ENST00000466494 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
IDH3B-204ENST00000466494 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
IDH3B-204ENST00000466494 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
IDH3B-204ENST00000466494 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
IDH3B-204ENST00000466494 NESP48681 1621 aa19.9■□□□□ 0.78
IDH3B-204ENST00000466494 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
IDH3B-204ENST00000466494 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
IDH3B-204ENST00000466494 RIMBP3CA6NJZ7 1639 aa19.71■□□□□ 0.75
IDH3B-204ENST00000466494 RIMBP3BA6NNM3 1639 aa19.71■□□□□ 0.75
IDH3B-204ENST00000466494 RIMBP3Q9UFD9 1639 aa19.71■□□□□ 0.75
IDH3B-204ENST00000466494 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
IDH3B-204ENST00000466494 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
IDH3B-204ENST00000466494 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
IDH3B-204ENST00000466494 ILDR1Q86SU0 546 aaPredicted RBP19.65■□□□□ 0.74
IDH3B-204ENST00000466494 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
IDH3B-204ENST00000466494 TRHP20396 242 aaPredicted RBP19.64■□□□□ 0.73
IDH3B-204ENST00000466494 KIF21AQ7Z4S6 1674 aa19.62■□□□□ 0.73
IDH3B-204ENST00000466494 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.72
IDH3B-204ENST00000466494 LAMC3Q9Y6N6 1575 aa19.48■□□□□ 0.71
IDH3B-204ENST00000466494 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
IDH3B-204ENST00000466494 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
IDH3B-204ENST00000466494 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
IDH3B-204ENST00000466494 PDS5BQ9NTI5 1447 aa19.38■□□□□ 0.69
IDH3B-204ENST00000466494 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
IDH3B-204ENST00000466494 WDR62O43379 1518 aa19.35■□□□□ 0.69
IDH3B-204ENST00000466494 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
IDH3B-204ENST00000466494 ARAP1Q96P48 1450 aa19.19■□□□□ 0.66
IDH3B-204ENST00000466494 BAZ1BQ9UIG0 1483 aaKnown RBP19.14■□□□□ 0.65
IDH3B-204ENST00000466494 SMARCA4P51532 1647 aa19.05■□□□□ 0.64
IDH3B-204ENST00000466494 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
IDH3B-204ENST00000466494 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
IDH3B-204ENST00000466494 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
IDH3B-204ENST00000466494 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
IDH3B-204ENST00000466494 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
IDH3B-204ENST00000466494 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
IDH3B-204ENST00000466494 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
IDH3B-204ENST00000466494 CHD1O14646 1710 aa18.78■□□□□ 0.6
IDH3B-204ENST00000466494 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
IDH3B-204ENST00000466494 KDM4FA0A1W2PPD8 638 aa18.7■□□□□ 0.58
IDH3B-204ENST00000466494 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
IDH3B-204ENST00000466494 EIF4G3O43432 1585 aaKnown RBP18.62■□□□□ 0.57
IDH3B-204ENST00000466494 ERCC6L2Q5T890 1561 aa18.56■□□□□ 0.56
IDH3B-204ENST00000466494 FBLN2P98095 1184 aa18.56■□□□□ 0.56
IDH3B-204ENST00000466494 LMTK3Q96Q04 1460 aa18.56■□□□□ 0.56
IDH3B-204ENST00000466494 FBXO41Q8TF61 875 aa18.55■□□□□ 0.56
IDH3B-204ENST00000466494 CLASP1Q7Z460 1538 aa18.5■□□□□ 0.55
IDH3B-204ENST00000466494 MROH2BQ7Z745 1585 aa18.48■□□□□ 0.55
IDH3B-204ENST00000466494 CFTRP13569 1480 aa18.47■□□□□ 0.55
IDH3B-204ENST00000466494 HECW2Q9P2P5 1572 aa18.46■□□□□ 0.55
IDH3B-204ENST00000466494 SOCS7O14512 581 aa18.45■□□□□ 0.54
IDH3B-204ENST00000466494 KIF13AQ9H1H9 1805 aa18.44■□□□□ 0.54
IDH3B-204ENST00000466494 AQRO60306 1485 aaKnown RBP eCLIP18.41■□□□□ 0.548e-7■■■■■ 26.8
IDH3B-204ENST00000466494 GAPVD1Q14C86 1478 aa18.4■□□□□ 0.54
IDH3B-204ENST00000466494 ADRA2BP18089 450 aa18.37■□□□□ 0.53
IDH3B-204ENST00000466494 ILDR2Q71H61 639 aa18.35■□□□□ 0.53
IDH3B-204ENST00000466494 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
IDH3B-204ENST00000466494 TOPBP1Q92547 1522 aa18.29■□□□□ 0.52
IDH3B-204ENST00000466494 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.51
IDH3B-204ENST00000466494 KDM6BO15054 1643 aa18.23■□□□□ 0.51
IDH3B-204ENST00000466494 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
IDH3B-204ENST00000466494 WIZO95785 1651 aa18.22■□□□□ 0.51
IDH3B-204ENST00000466494 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
IDH3B-204ENST00000466494 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
IDH3B-204ENST00000466494 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
IDH3B-204ENST00000466494 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
IDH3B-204ENST00000466494 FOXD1Q16676 465 aa18.16■□□□□ 0.5
IDH3B-204ENST00000466494 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
IDH3B-204ENST00000466494 DISP3Q9P2K9 1392 aa18.14■□□□□ 0.49
IDH3B-204ENST00000466494 DNMBPQ6XZF7 1577 aa18.09■□□□□ 0.49
IDH3B-204ENST00000466494 FAM69CQ0P6D2 419 aa18.09■□□□□ 0.49
IDH3B-204ENST00000466494 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
IDH3B-204ENST00000466494 ABCC10Q5T3U5 1492 aa18.06■□□□□ 0.48
IDH3B-204ENST00000466494 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
IDH3B-204ENST00000466494 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
IDH3B-204ENST00000466494 MAGI1Q96QZ7 1491 aaPredicted RBP18.04■□□□□ 0.48
IDH3B-204ENST00000466494 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
IDH3B-204ENST00000466494 DIP2BQ9P265 1576 aa18.01■□□□□ 0.47
IDH3B-204ENST00000466494 KCNA4P22459 653 aa18.01■□□□□ 0.47
IDH3B-204ENST00000466494 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms