RNA–Protein interactions for RNA: ENST00000466290.1

SKIV2L-205, Transcript of Ski2 like RNA helicase, humanhuman

TSL 3

Gene SKIV2L, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-205ENST00000466290 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
SKIV2L-205ENST00000466290 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
SKIV2L-205ENST00000466290 ABCC9O60706 1549 aa20.94■□□□□ 0.94
SKIV2L-205ENST00000466290 NACADO15069 1562 aa20.27■□□□□ 0.84
SKIV2L-205ENST00000466290 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
SKIV2L-205ENST00000466290 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
SKIV2L-205ENST00000466290 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
SKIV2L-205ENST00000466290 ZCCHC6Q5VYS8 1495 aaKnown RBP20.21■□□□□ 0.83
SKIV2L-205ENST00000466290 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
SKIV2L-205ENST00000466290 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
SKIV2L-205ENST00000466290 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
SKIV2L-205ENST00000466290 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
SKIV2L-205ENST00000466290 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
SKIV2L-205ENST00000466290 SHROOM4Q9ULL8 1493 aa19.53■□□□□ 0.72
SKIV2L-205ENST00000466290 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
SKIV2L-205ENST00000466290 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
SKIV2L-205ENST00000466290 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
SKIV2L-205ENST00000466290 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
SKIV2L-205ENST00000466290 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
SKIV2L-205ENST00000466290 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
SKIV2L-205ENST00000466290 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
SKIV2L-205ENST00000466290 SMARCA4P51532 1647 aa18.77■□□□□ 0.6
SKIV2L-205ENST00000466290 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
SKIV2L-205ENST00000466290 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
SKIV2L-205ENST00000466290 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
SKIV2L-205ENST00000466290 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.58
SKIV2L-205ENST00000466290 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.57
SKIV2L-205ENST00000466290 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
SKIV2L-205ENST00000466290 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
SKIV2L-205ENST00000466290 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
SKIV2L-205ENST00000466290 WIZO95785 1651 aa18.41■□□□□ 0.54
SKIV2L-205ENST00000466290 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
SKIV2L-205ENST00000466290 LAMC3Q9Y6N6 1575 aa18.18■□□□□ 0.5
SKIV2L-205ENST00000466290 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
SKIV2L-205ENST00000466290 NESP48681 1621 aa18.12■□□□□ 0.49
SKIV2L-205ENST00000466290 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
SKIV2L-205ENST00000466290 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
SKIV2L-205ENST00000466290 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
SKIV2L-205ENST00000466290 CFTRP13569 1480 aa18.06■□□□□ 0.48
SKIV2L-205ENST00000466290 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
SKIV2L-205ENST00000466290 CUX2O14529 1486 aa17.94■□□□□ 0.46
SKIV2L-205ENST00000466290 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
SKIV2L-205ENST00000466290 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
SKIV2L-205ENST00000466290 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
SKIV2L-205ENST00000466290 MRC2Q9UBG0 1479 aa17.86■□□□□ 0.45
SKIV2L-205ENST00000466290 PRDM2Q13029 1718 aa17.85■□□□□ 0.45
SKIV2L-205ENST00000466290 THOC2Q8NI27 1593 aaKnown RBP17.85■□□□□ 0.45
SKIV2L-205ENST00000466290 WDR62O43379 1518 aa17.78■□□□□ 0.44
SKIV2L-205ENST00000466290 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
SKIV2L-205ENST00000466290 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
SKIV2L-205ENST00000466290 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
SKIV2L-205ENST00000466290 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
SKIV2L-205ENST00000466290 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
SKIV2L-205ENST00000466290 CUX1P39880 1505 aa17.49■□□□□ 0.39
SKIV2L-205ENST00000466290 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
SKIV2L-205ENST00000466290 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
SKIV2L-205ENST00000466290 SOGA1O94964 1423 aa17.44■□□□□ 0.38
SKIV2L-205ENST00000466290 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
SKIV2L-205ENST00000466290 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
SKIV2L-205ENST00000466290 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
SKIV2L-205ENST00000466290 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
SKIV2L-205ENST00000466290 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
SKIV2L-205ENST00000466290 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
SKIV2L-205ENST00000466290 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
SKIV2L-205ENST00000466290 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
SKIV2L-205ENST00000466290 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
SKIV2L-205ENST00000466290 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■■■■□ 26.3
SKIV2L-205ENST00000466290 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
SKIV2L-205ENST00000466290 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
SKIV2L-205ENST00000466290 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
SKIV2L-205ENST00000466290 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
SKIV2L-205ENST00000466290 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
SKIV2L-205ENST00000466290 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
SKIV2L-205ENST00000466290 MAGI1Q96QZ7 1491 aaPredicted RBP17.19■□□□□ 0.34
SKIV2L-205ENST00000466290 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
SKIV2L-205ENST00000466290 SNAPC4Q5SXM2 1469 aa17.15■□□□□ 0.34
SKIV2L-205ENST00000466290 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
SKIV2L-205ENST00000466290 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
SKIV2L-205ENST00000466290 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
SKIV2L-205ENST00000466290 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
SKIV2L-205ENST00000466290 FBLN2P98095 1184 aa17.11■□□□□ 0.33
SKIV2L-205ENST00000466290 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
SKIV2L-205ENST00000466290 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
SKIV2L-205ENST00000466290 FHAD1B1AJZ9 1412 aa17.06■□□□□ 0.32
SKIV2L-205ENST00000466290 CHD1O14646 1710 aa17.04■□□□□ 0.32
SKIV2L-205ENST00000466290 IGF1RP08069 1367 aa17.02■□□□□ 0.32
SKIV2L-205ENST00000466290 ADAMTS12P58397 1594 aa17.02■□□□□ 0.31
SKIV2L-205ENST00000466290 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
SKIV2L-205ENST00000466290 CUL7Q14999 1698 aa16.95■□□□□ 0.3
SKIV2L-205ENST00000466290 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
SKIV2L-205ENST00000466290 NUP160Q12769 1436 aa16.94■□□□□ 0.3
SKIV2L-205ENST00000466290 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
SKIV2L-205ENST00000466290 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
SKIV2L-205ENST00000466290 EEA1Q15075 1411 aa16.87■□□□□ 0.29
SKIV2L-205ENST00000466290 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
SKIV2L-205ENST00000466290 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
SKIV2L-205ENST00000466290 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
SKIV2L-205ENST00000466290 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
SKIV2L-205ENST00000466290 RIMBP3CA6NJZ7 1639 aa16.81■□□□□ 0.28
SKIV2L-205ENST00000466290 RIMBP3BA6NNM3 1639 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms