RNA–Protein interactions for RNA: ENST00000466199.1

EIF3B-208, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-208ENST00000466199 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
EIF3B-208ENST00000466199 CCDC180Q9P1Z9 1646 aa18.37■□□□□ 0.53
EIF3B-208ENST00000466199 ABCC9O60706 1549 aa17.81■□□□□ 0.44
EIF3B-208ENST00000466199 DCAF8L2P0C7V8 631 aa17.74■□□□□ 0.43
EIF3B-208ENST00000466199 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
EIF3B-208ENST00000466199 DCAF1Q9Y4B6 1507 aa17.36■□□□□ 0.37
EIF3B-208ENST00000466199 NACADO15069 1562 aa17.32■□□□□ 0.36
EIF3B-208ENST00000466199 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
EIF3B-208ENST00000466199 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
EIF3B-208ENST00000466199 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
EIF3B-208ENST00000466199 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
EIF3B-208ENST00000466199 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
EIF3B-208ENST00000466199 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
EIF3B-208ENST00000466199 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
EIF3B-208ENST00000466199 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
EIF3B-208ENST00000466199 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
EIF3B-208ENST00000466199 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
EIF3B-208ENST00000466199 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
EIF3B-208ENST00000466199 EIF4G1Q04637 1599 aaKnown RBP16.19■□□□□ 0.18
EIF3B-208ENST00000466199 RSF1Q96T23 1441 aaPredicted RBP16.18■□□□□ 0.18
EIF3B-208ENST00000466199 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
EIF3B-208ENST00000466199 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
EIF3B-208ENST00000466199 SMARCA2P51531 1590 aa16.05■□□□□ 0.16
EIF3B-208ENST00000466199 ATAD2BQ9ULI0 1458 aa16.05■□□□□ 0.16
EIF3B-208ENST00000466199 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
EIF3B-208ENST00000466199 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
EIF3B-208ENST00000466199 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
EIF3B-208ENST00000466199 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.14
EIF3B-208ENST00000466199 WIZO95785 1651 aa15.95■□□□□ 0.14
EIF3B-208ENST00000466199 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
EIF3B-208ENST00000466199 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
EIF3B-208ENST00000466199 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
EIF3B-208ENST00000466199 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
EIF3B-208ENST00000466199 CFTRP13569 1480 aa15.53■□□□□ 0.08
EIF3B-208ENST00000466199 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
EIF3B-208ENST00000466199 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
EIF3B-208ENST00000466199 NESP48681 1621 aa15.46■□□□□ 0.07
EIF3B-208ENST00000466199 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
EIF3B-208ENST00000466199 FANCD2Q9BXW9 1451 aa15.39■□□□□ 0.05
EIF3B-208ENST00000466199 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
EIF3B-208ENST00000466199 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
EIF3B-208ENST00000466199 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
EIF3B-208ENST00000466199 CUX2O14529 1486 aa15.28■□□□□ 0.04
EIF3B-208ENST00000466199 WRNQ14191 1432 aaPredicted RBP eCLIP15.28■□□□□ 0.042e-7■□□□□ 9.9
EIF3B-208ENST00000466199 ABCC8Q09428 1581 aa15.27■□□□□ 0.03
EIF3B-208ENST00000466199 MRC2Q9UBG0 1479 aa15.22■□□□□ 0.03
EIF3B-208ENST00000466199 DNAJC5Q9H3Z4 198 aa15.22■□□□□ 0.03
EIF3B-208ENST00000466199 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
EIF3B-208ENST00000466199 KIF21AQ7Z4S6 1674 aa15.16■□□□□ 0.02
EIF3B-208ENST00000466199 URB2Q14146 1524 aaKnown RBP15.14■□□□□ 0.01
EIF3B-208ENST00000466199 TOPBP1Q92547 1522 aa15.14■□□□□ 0.01
EIF3B-208ENST00000466199 DNMBPQ6XZF7 1577 aa15.13■□□□□ 0.01
EIF3B-208ENST00000466199 CUX1P39880 1505 aa15.12■□□□□ 0.01
EIF3B-208ENST00000466199 THOC2Q8NI27 1593 aaKnown RBP15.12■□□□□ 0.01
EIF3B-208ENST00000466199 SOGA1O94964 1423 aa15.1■□□□□ 0.01
EIF3B-208ENST00000466199 TOP2BQ02880 1626 aa15.08■□□□□ 0
EIF3B-208ENST00000466199 WDR62O43379 1518 aa15.07■□□□□ 0
EIF3B-208ENST00000466199 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
EIF3B-208ENST00000466199 SYNJ1O43426 1573 aa15.07■□□□□ 0
EIF3B-208ENST00000466199 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
EIF3B-208ENST00000466199 FAM9AQ8IZU1 332 aaPredicted RBP15.02■□□□□ -0
EIF3B-208ENST00000466199 BIVM-ERCC5R4GMW8 1640 aa15.02□□□□□ -0.01
EIF3B-208ENST00000466199 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
EIF3B-208ENST00000466199 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
EIF3B-208ENST00000466199 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
EIF3B-208ENST00000466199 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
EIF3B-208ENST00000466199 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
EIF3B-208ENST00000466199 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
EIF3B-208ENST00000466199 EEA1Q15075 1411 aa14.93□□□□□ -0.02
EIF3B-208ENST00000466199 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.034e-9■■■■□ 21.3
EIF3B-208ENST00000466199 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
EIF3B-208ENST00000466199 TARBP1Q13395 1621 aaKnown RBP14.87□□□□□ -0.03
EIF3B-208ENST00000466199 IGF1RP08069 1367 aa14.86□□□□□ -0.03
EIF3B-208ENST00000466199 ZNF608Q9ULD9 1512 aaPredicted RBP14.85□□□□□ -0.03
EIF3B-208ENST00000466199 RUSC2Q8N2Y8 1516 aa14.84□□□□□ -0.03
EIF3B-208ENST00000466199 GRIN2BQ13224 1484 aa14.83□□□□□ -0.03
EIF3B-208ENST00000466199 FBLN2P98095 1184 aa14.83□□□□□ -0.04
EIF3B-208ENST00000466199 CHMP7Q8WUX9 453 aaPredicted RBP14.83□□□□□ -0.04
EIF3B-208ENST00000466199 CARMIL1Q5VZK9 1371 aa14.82□□□□□ -0.04
EIF3B-208ENST00000466199 WDR97A6NE52 1622 aa14.8□□□□□ -0.04
EIF3B-208ENST00000466199 UBTFP17480 764 aaKnown RBP14.79□□□□□ -0.04
EIF3B-208ENST00000466199 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
EIF3B-208ENST00000466199 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
EIF3B-208ENST00000466199 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
EIF3B-208ENST00000466199 LOC105371045A0A1W2PR82 267 aa14.73□□□□□ -0.05
EIF3B-208ENST00000466199 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
EIF3B-208ENST00000466199 MAGI1Q96QZ7 1491 aaPredicted RBP14.72□□□□□ -0.05
EIF3B-208ENST00000466199 EIF4G3O43432 1585 aaKnown RBP14.72□□□□□ -0.05
EIF3B-208ENST00000466199 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
EIF3B-208ENST00000466199 RAPGEF2Q9Y4G8 1499 aa14.7□□□□□ -0.06
EIF3B-208ENST00000466199 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
EIF3B-208ENST00000466199 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
EIF3B-208ENST00000466199 SYNJ2O15056 1496 aa14.66□□□□□ -0.06
EIF3B-208ENST00000466199 GOLGA3Q08378 1498 aa14.65□□□□□ -0.06
EIF3B-208ENST00000466199 CUL7Q14999 1698 aa14.64□□□□□ -0.07
EIF3B-208ENST00000466199 PBRM1Q86U86 1689 aa14.62□□□□□ -0.07
EIF3B-208ENST00000466199 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
EIF3B-208ENST00000466199 GRIN2AQ12879 1464 aa14.59□□□□□ -0.07
EIF3B-208ENST00000466199 KIF21BO75037 1637 aa14.59□□□□□ -0.07
EIF3B-208ENST00000466199 TNIKQ9UKE5 1360 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms