RNA–Protein interactions for RNA: ENST00000466183.1

SNRNP25-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 2

Gene SNRNP25, Length 1,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-205ENST00000466183 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
SNRNP25-205ENST00000466183 NISCHQ9Y2I1 1504 aa21■□□□□ 0.95
SNRNP25-205ENST00000466183 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
SNRNP25-205ENST00000466183 ABCC9O60706 1549 aa19.01■□□□□ 0.63
SNRNP25-205ENST00000466183 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
SNRNP25-205ENST00000466183 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
SNRNP25-205ENST00000466183 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
SNRNP25-205ENST00000466183 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
SNRNP25-205ENST00000466183 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
SNRNP25-205ENST00000466183 NACADO15069 1562 aa17.87■□□□□ 0.45
SNRNP25-205ENST00000466183 DCAF8L2P0C7V8 631 aa17.7■□□□□ 0.42
SNRNP25-205ENST00000466183 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
SNRNP25-205ENST00000466183 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNRNP25-205ENST00000466183 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
SNRNP25-205ENST00000466183 BICRAQ9NZM4 1560 aa17.54■□□□□ 0.4
SNRNP25-205ENST00000466183 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
SNRNP25-205ENST00000466183 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
SNRNP25-205ENST00000466183 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
SNRNP25-205ENST00000466183 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
SNRNP25-205ENST00000466183 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
SNRNP25-205ENST00000466183 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
SNRNP25-205ENST00000466183 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
SNRNP25-205ENST00000466183 FOXD1Q16676 465 aa17.05■□□□□ 0.32
SNRNP25-205ENST00000466183 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
SNRNP25-205ENST00000466183 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
SNRNP25-205ENST00000466183 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
SNRNP25-205ENST00000466183 DNAJC5Q9H3Z4 198 aa16.43■□□□□ 0.22
SNRNP25-205ENST00000466183 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
SNRNP25-205ENST00000466183 CUX2O14529 1486 aa16.4■□□□□ 0.22
SNRNP25-205ENST00000466183 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
SNRNP25-205ENST00000466183 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
SNRNP25-205ENST00000466183 NESP48681 1621 aa16.32■□□□□ 0.2
SNRNP25-205ENST00000466183 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
SNRNP25-205ENST00000466183 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
SNRNP25-205ENST00000466183 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
SNRNP25-205ENST00000466183 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.18
SNRNP25-205ENST00000466183 THOC2Q8NI27 1593 aaKnown RBP16.2■□□□□ 0.18
SNRNP25-205ENST00000466183 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
SNRNP25-205ENST00000466183 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
SNRNP25-205ENST00000466183 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
SNRNP25-205ENST00000466183 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
SNRNP25-205ENST00000466183 WIZO95785 1651 aa16.02■□□□□ 0.16
SNRNP25-205ENST00000466183 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
SNRNP25-205ENST00000466183 MRC2Q9UBG0 1479 aa15.95■□□□□ 0.14
SNRNP25-205ENST00000466183 MSH5O43196 834 aa15.93■□□□□ 0.14
SNRNP25-205ENST00000466183 WDR62O43379 1518 aa15.93■□□□□ 0.14
SNRNP25-205ENST00000466183 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
SNRNP25-205ENST00000466183 PIAS4Q8N2W9 510 aaPredicted RBP15.89■□□□□ 0.13
SNRNP25-205ENST00000466183 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
SNRNP25-205ENST00000466183 ADRA2BP18089 450 aa15.85■□□□□ 0.13
SNRNP25-205ENST00000466183 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
SNRNP25-205ENST00000466183 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
SNRNP25-205ENST00000466183 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
SNRNP25-205ENST00000466183 CFTRP13569 1480 aa15.78■□□□□ 0.12
SNRNP25-205ENST00000466183 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
SNRNP25-205ENST00000466183 TRIM41Q8WV44 630 aa15.72■□□□□ 0.11
SNRNP25-205ENST00000466183 PRDM2Q13029 1718 aa15.7■□□□□ 0.1
SNRNP25-205ENST00000466183 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
SNRNP25-205ENST00000466183 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
SNRNP25-205ENST00000466183 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
SNRNP25-205ENST00000466183 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
SNRNP25-205ENST00000466183 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
SNRNP25-205ENST00000466183 IFT140Q96RY7 1462 aa15.52■□□□□ 0.08
SNRNP25-205ENST00000466183 RIMBP3CA6NJZ7 1639 aa15.49■□□□□ 0.07
SNRNP25-205ENST00000466183 RIMBP3BA6NNM3 1639 aa15.49■□□□□ 0.07
SNRNP25-205ENST00000466183 RIMBP3Q9UFD9 1639 aa15.49■□□□□ 0.07
SNRNP25-205ENST00000466183 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
SNRNP25-205ENST00000466183 DNMBPQ6XZF7 1577 aa15.47■□□□□ 0.07
SNRNP25-205ENST00000466183 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
SNRNP25-205ENST00000466183 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
SNRNP25-205ENST00000466183 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
SNRNP25-205ENST00000466183 CHD1O14646 1710 aa15.4■□□□□ 0.06
SNRNP25-205ENST00000466183 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.052e-7■■■■■ 35.7
SNRNP25-205ENST00000466183 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
SNRNP25-205ENST00000466183 RAD54L2Q9Y4B4 1467 aa15.31■□□□□ 0.04
SNRNP25-205ENST00000466183 FGD5Q6ZNL6 1462 aa15.26■□□□□ 0.03
SNRNP25-205ENST00000466183 ARAP1Q96P48 1450 aa15.26■□□□□ 0.03
SNRNP25-205ENST00000466183 FBLN2P98095 1184 aa15.25■□□□□ 0.03
SNRNP25-205ENST00000466183 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
SNRNP25-205ENST00000466183 CUX1P39880 1505 aa15.24■□□□□ 0.03
SNRNP25-205ENST00000466183 SNAPC4Q5SXM2 1469 aa15.24■□□□□ 0.03
SNRNP25-205ENST00000466183 SOGA1O94964 1423 aa15.24■□□□□ 0.03
SNRNP25-205ENST00000466183 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
SNRNP25-205ENST00000466183 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
SNRNP25-205ENST00000466183 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
SNRNP25-205ENST00000466183 MAGI1Q96QZ7 1491 aaPredicted RBP15.16■□□□□ 0.02
SNRNP25-205ENST00000466183 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
SNRNP25-205ENST00000466183 PBRM1Q86U86 1689 aa15.15■□□□□ 0.02
SNRNP25-205ENST00000466183 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
SNRNP25-205ENST00000466183 SYNJ2O15056 1496 aa15.11■□□□□ 0.01
SNRNP25-205ENST00000466183 CHMP7Q8WUX9 453 aaPredicted RBP15.1■□□□□ 0.01
SNRNP25-205ENST00000466183 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
SNRNP25-205ENST00000466183 TRHP20396 242 aaPredicted RBP15.09■□□□□ 0.01
SNRNP25-205ENST00000466183 GAPVD1Q14C86 1478 aa15.08■□□□□ 0.01
SNRNP25-205ENST00000466183 ABCA10Q8WWZ4 1543 aa15.06■□□□□ 0
SNRNP25-205ENST00000466183 ADAMTS12P58397 1594 aa15□□□□□ -0.01
SNRNP25-205ENST00000466183 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
SNRNP25-205ENST00000466183 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
SNRNP25-205ENST00000466183 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
SNRNP25-205ENST00000466183 ERCC6L2Q5T890 1561 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms