RNA–Protein interactions for RNA: ENST00000465956.1

CUTA-206, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 2

Gene CUTA, Length 961 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-206ENST00000465956 NISCHQ9Y2I1 1504 aa27.69■■■□□ 2.02
CUTA-206ENST00000465956 ABCC9O60706 1549 aa25.71■■□□□ 1.71
CUTA-206ENST00000465956 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
CUTA-206ENST00000465956 DNAJC5BQ9UF47 199 aa24.74■■□□□ 1.55
CUTA-206ENST00000465956 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.44
CUTA-206ENST00000465956 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
CUTA-206ENST00000465956 NACADO15069 1562 aa23.74■■□□□ 1.39
CUTA-206ENST00000465956 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
CUTA-206ENST00000465956 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
CUTA-206ENST00000465956 BICRAQ9NZM4 1560 aa23.45■■□□□ 1.34
CUTA-206ENST00000465956 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
CUTA-206ENST00000465956 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
CUTA-206ENST00000465956 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
CUTA-206ENST00000465956 CC2D2AQ9P2K1 1620 aa23.13■■□□□ 1.29
CUTA-206ENST00000465956 DNAJC5Q9H3Z4 198 aa23.09■■□□□ 1.29
CUTA-206ENST00000465956 EIF4G1Q04637 1599 aaKnown RBP22.92■■□□□ 1.26
CUTA-206ENST00000465956 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
CUTA-206ENST00000465956 DCAF1Q9Y4B6 1507 aa22.88■■□□□ 1.25
CUTA-206ENST00000465956 SCRIBQ14160 1630 aa22.8■■□□□ 1.24
CUTA-206ENST00000465956 CUX2O14529 1486 aa22.29■■□□□ 1.16
CUTA-206ENST00000465956 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
CUTA-206ENST00000465956 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
CUTA-206ENST00000465956 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
CUTA-206ENST00000465956 NESP48681 1621 aa21.91■■□□□ 1.1
CUTA-206ENST00000465956 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
CUTA-206ENST00000465956 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
CUTA-206ENST00000465956 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
CUTA-206ENST00000465956 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
CUTA-206ENST00000465956 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
CUTA-206ENST00000465956 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
CUTA-206ENST00000465956 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
CUTA-206ENST00000465956 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
CUTA-206ENST00000465956 PDS5BQ9NTI5 1447 aa21.47■■□□□ 1.03
CUTA-206ENST00000465956 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
CUTA-206ENST00000465956 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
CUTA-206ENST00000465956 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
CUTA-206ENST00000465956 MRC2Q9UBG0 1479 aa21.32■■□□□ 1
CUTA-206ENST00000465956 CADPSQ9ULU8 1353 aa21.3■■□□□ 1
CUTA-206ENST00000465956 OSCARQ8IYS5 282 aa21.27■■□□□ 1
CUTA-206ENST00000465956 WDR62O43379 1518 aa21.27■■□□□ 1
CUTA-206ENST00000465956 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
CUTA-206ENST00000465956 WIZO95785 1651 aa21.2■□□□□ 0.98
CUTA-206ENST00000465956 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
CUTA-206ENST00000465956 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
CUTA-206ENST00000465956 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
CUTA-206ENST00000465956 RIMBP3CA6NJZ7 1639 aa21.03■□□□□ 0.96
CUTA-206ENST00000465956 RIMBP3BA6NNM3 1639 aa21.03■□□□□ 0.96
CUTA-206ENST00000465956 RIMBP3Q9UFD9 1639 aa21.03■□□□□ 0.96
CUTA-206ENST00000465956 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
CUTA-206ENST00000465956 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
CUTA-206ENST00000465956 CFTRP13569 1480 aa20.9■□□□□ 0.94
CUTA-206ENST00000465956 ARHGEF11O15085 1522 aa20.89■□□□□ 0.94
CUTA-206ENST00000465956 CYB5RLQ6IPT4 315 aa20.88■□□□□ 0.93
CUTA-206ENST00000465956 TRHP20396 242 aaPredicted RBP20.86■□□□□ 0.93
CUTA-206ENST00000465956 ZNF608Q9ULD9 1512 aaPredicted RBP20.82■□□□□ 0.92
CUTA-206ENST00000465956 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
CUTA-206ENST00000465956 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
CUTA-206ENST00000465956 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
CUTA-206ENST00000465956 ARAP1Q96P48 1450 aa20.66■□□□□ 0.9
CUTA-206ENST00000465956 FBLN2P98095 1184 aa20.61■□□□□ 0.89
CUTA-206ENST00000465956 EIF4G3O43432 1585 aaKnown RBP20.6■□□□□ 0.89
CUTA-206ENST00000465956 TOPBP1Q92547 1522 aa20.58■□□□□ 0.89
CUTA-206ENST00000465956 CHD1O14646 1710 aa20.58■□□□□ 0.88
CUTA-206ENST00000465956 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.883e-9■■■■■ 45.6
CUTA-206ENST00000465956 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
CUTA-206ENST00000465956 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
CUTA-206ENST00000465956 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
CUTA-206ENST00000465956 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
CUTA-206ENST00000465956 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
CUTA-206ENST00000465956 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
CUTA-206ENST00000465956 POLA1P09884 1462 aaPredicted RBP20.34■□□□□ 0.85
CUTA-206ENST00000465956 CLASP1Q7Z460 1538 aa20.31■□□□□ 0.84
CUTA-206ENST00000465956 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
CUTA-206ENST00000465956 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
CUTA-206ENST00000465956 SOGA1O94964 1423 aa20.27■□□□□ 0.83
CUTA-206ENST00000465956 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
CUTA-206ENST00000465956 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
CUTA-206ENST00000465956 FGD5Q6ZNL6 1462 aa20.14■□□□□ 0.81
CUTA-206ENST00000465956 MAGI1Q96QZ7 1491 aaPredicted RBP20.14■□□□□ 0.81
CUTA-206ENST00000465956 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
CUTA-206ENST00000465956 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
CUTA-206ENST00000465956 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
CUTA-206ENST00000465956 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
CUTA-206ENST00000465956 WRNQ14191 1432 aaPredicted RBP eCLIP20.03■□□□□ 0.86e-6■■■□□ 16.7
CUTA-206ENST00000465956 CUX1P39880 1505 aa20.02■□□□□ 0.8
CUTA-206ENST00000465956 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
CUTA-206ENST00000465956 BIVM-ERCC5R4GMW8 1640 aa19.97■□□□□ 0.79
CUTA-206ENST00000465956 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
CUTA-206ENST00000465956 KIF13AQ9H1H9 1805 aa19.88■□□□□ 0.77
CUTA-206ENST00000465956 CEP170Q5SW79 1584 aa19.88■□□□□ 0.77
CUTA-206ENST00000465956 ILDR1Q86SU0 546 aaPredicted RBP19.88■□□□□ 0.77
CUTA-206ENST00000465956 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
CUTA-206ENST00000465956 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
CUTA-206ENST00000465956 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
CUTA-206ENST00000465956 KDM4FA0A1W2PPD8 638 aa19.82■□□□□ 0.76
CUTA-206ENST00000465956 NUP160Q12769 1436 aa19.81■□□□□ 0.76
CUTA-206ENST00000465956 FAM69CQ0P6D2 419 aa19.8■□□□□ 0.76
CUTA-206ENST00000465956 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
CUTA-206ENST00000465956 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
CUTA-206ENST00000465956 ADAMTS12P58397 1594 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms