RNA–Protein interactions for RNA: ENST00000465772.5

RAB18-204, Transcript of RAB18, member RAS oncogene family, humanhuman

TSL 2

Gene RAB18, Length 985 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB18-204ENST00000465772 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
RAB18-204ENST00000465772 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
RAB18-204ENST00000465772 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
RAB18-204ENST00000465772 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
RAB18-204ENST00000465772 NISCHQ9Y2I1 1504 aa21.93■■□□□ 1.1
RAB18-204ENST00000465772 FOXD1Q16676 465 aa20.89■□□□□ 0.93
RAB18-204ENST00000465772 PLPPR3Q6T4P5 718 aa20.1■□□□□ 0.81
RAB18-204ENST00000465772 ABCC9O60706 1549 aa19.78■□□□□ 0.76
RAB18-204ENST00000465772 CCDC180Q9P1Z9 1646 aa19.73■□□□□ 0.75
RAB18-204ENST00000465772 PPP6R1Q9UPN7 881 aa19.73■□□□□ 0.75
RAB18-204ENST00000465772 ADRA2BP18089 450 aa19.65■□□□□ 0.74
RAB18-204ENST00000465772 PIAS4Q8N2W9 510 aaPredicted RBP19.52■□□□□ 0.72
RAB18-204ENST00000465772 MSH5O43196 834 aa19.36■□□□□ 0.69
RAB18-204ENST00000465772 POTEDQ86YR6 584 aa19.27■□□□□ 0.68
RAB18-204ENST00000465772 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
RAB18-204ENST00000465772 NACADO15069 1562 aa18.65■□□□□ 0.58
RAB18-204ENST00000465772 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
RAB18-204ENST00000465772 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
RAB18-204ENST00000465772 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
RAB18-204ENST00000465772 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
RAB18-204ENST00000465772 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.53
RAB18-204ENST00000465772 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
RAB18-204ENST00000465772 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
RAB18-204ENST00000465772 DNAJC5Q9H3Z4 198 aa18.1■□□□□ 0.49
RAB18-204ENST00000465772 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
RAB18-204ENST00000465772 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
RAB18-204ENST00000465772 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
RAB18-204ENST00000465772 SHROOM4Q9ULL8 1493 aa17.97■□□□□ 0.47
RAB18-204ENST00000465772 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
RAB18-204ENST00000465772 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
RAB18-204ENST00000465772 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
RAB18-204ENST00000465772 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
RAB18-204ENST00000465772 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
RAB18-204ENST00000465772 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
RAB18-204ENST00000465772 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
RAB18-204ENST00000465772 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
RAB18-204ENST00000465772 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
RAB18-204ENST00000465772 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
RAB18-204ENST00000465772 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
RAB18-204ENST00000465772 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
RAB18-204ENST00000465772 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
RAB18-204ENST00000465772 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
RAB18-204ENST00000465772 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
RAB18-204ENST00000465772 CUX2O14529 1486 aa17.05■□□□□ 0.32
RAB18-204ENST00000465772 BAZ1AQ9NRL2 1556 aaPredicted RBP17.04■□□□□ 0.32
RAB18-204ENST00000465772 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
RAB18-204ENST00000465772 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
RAB18-204ENST00000465772 NESP48681 1621 aa16.97■□□□□ 0.31
RAB18-204ENST00000465772 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
RAB18-204ENST00000465772 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
RAB18-204ENST00000465772 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
RAB18-204ENST00000465772 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
RAB18-204ENST00000465772 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
RAB18-204ENST00000465772 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
RAB18-204ENST00000465772 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
RAB18-204ENST00000465772 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
RAB18-204ENST00000465772 WIZO95785 1651 aa16.73■□□□□ 0.27
RAB18-204ENST00000465772 KCNA4P22459 653 aa16.72■□□□□ 0.27
RAB18-204ENST00000465772 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
RAB18-204ENST00000465772 RNF39Q9H2S5 420 aa16.61■□□□□ 0.25
RAB18-204ENST00000465772 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
RAB18-204ENST00000465772 WDR62O43379 1518 aa16.56■□□□□ 0.24
RAB18-204ENST00000465772 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
RAB18-204ENST00000465772 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
RAB18-204ENST00000465772 RSF1Q96T23 1441 aaPredicted RBP16.52■□□□□ 0.23
RAB18-204ENST00000465772 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
RAB18-204ENST00000465772 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
RAB18-204ENST00000465772 CFTRP13569 1480 aa16.48■□□□□ 0.23
RAB18-204ENST00000465772 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
RAB18-204ENST00000465772 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
RAB18-204ENST00000465772 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
RAB18-204ENST00000465772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.212e-7■■□□□ 13.4
RAB18-204ENST00000465772 C1QBPQ07021 282 aaKnown RBP16.31■□□□□ 0.2
RAB18-204ENST00000465772 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
RAB18-204ENST00000465772 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
RAB18-204ENST00000465772 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
RAB18-204ENST00000465772 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
RAB18-204ENST00000465772 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
RAB18-204ENST00000465772 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
RAB18-204ENST00000465772 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
RAB18-204ENST00000465772 EIF4G3O43432 1585 aaKnown RBP16.11■□□□□ 0.17
RAB18-204ENST00000465772 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
RAB18-204ENST00000465772 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
RAB18-204ENST00000465772 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
RAB18-204ENST00000465772 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
RAB18-204ENST00000465772 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
RAB18-204ENST00000465772 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
RAB18-204ENST00000465772 CHD1O14646 1710 aa16.03■□□□□ 0.16
RAB18-204ENST00000465772 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
RAB18-204ENST00000465772 ARHGEF11O15085 1522 aa16.02■□□□□ 0.15
RAB18-204ENST00000465772 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
RAB18-204ENST00000465772 FBLN2P98095 1184 aa15.96■□□□□ 0.15
RAB18-204ENST00000465772 RAD54L2Q9Y4B4 1467 aa15.96■□□□□ 0.14
RAB18-204ENST00000465772 SOGA1O94964 1423 aa15.94■□□□□ 0.14
RAB18-204ENST00000465772 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
RAB18-204ENST00000465772 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
RAB18-204ENST00000465772 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
RAB18-204ENST00000465772 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
RAB18-204ENST00000465772 CUX1P39880 1505 aa15.89■□□□□ 0.13
RAB18-204ENST00000465772 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms