RNA–Protein interactions for RNA: ENST00000465565.1

SURF4-204, Transcript of surfeit 4, humanhuman

TSL 3

Gene SURF4, Length 400 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-204ENST00000465565 NISCHQ9Y2I1 1504 aa48.1■■■■■ 5.29
SURF4-204ENST00000465565 CCDC180Q9P1Z9 1646 aa42.64■■■■■ 4.42
SURF4-204ENST00000465565 ABCC9O60706 1549 aa41.62■■■■■ 4.25
SURF4-204ENST00000465565 DCAF8L2P0C7V8 631 aa40.14■■■■■ 4.02
SURF4-204ENST00000465565 NACADO15069 1562 aa40.09■■■■■ 4.01
SURF4-204ENST00000465565 ZCCHC6Q5VYS8 1495 aaKnown RBP40.08■■■■■ 4.01
SURF4-204ENST00000465565 RB1CC1Q8TDY2 1594 aa40.08■■■■■ 4.01
SURF4-204ENST00000465565 MYO15BQ96JP2 1530 aa39.91■■■■□ 3.98
SURF4-204ENST00000465565 DCAF1Q9Y4B6 1507 aa39.8■■■■□ 3.96
SURF4-204ENST00000465565 UNC13AQ9UPW8 1703 aa39.17■■■■□ 3.86
SURF4-204ENST00000465565 PABPN1Q86U42 306 aaKnown RBP eCLIP38.95■■■■□ 3.83
SURF4-204ENST00000465565 SCRIBQ14160 1630 aa38.93■■■■□ 3.82
SURF4-204ENST00000465565 BICRAQ9NZM4 1560 aa38.89■■■■□ 3.82
SURF4-204ENST00000465565 SHROOM4Q9ULL8 1493 aa38.46■■■■□ 3.75
SURF4-204ENST00000465565 DNAJC5BQ9UF47 199 aa38.12■■■■□ 3.69
SURF4-204ENST00000465565 EIF4G1Q04637 1599 aaKnown RBP37.84■■■■□ 3.65
SURF4-204ENST00000465565 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
SURF4-204ENST00000465565 CECR2Q9BXF3 1484 aa37.47■■■■□ 3.59
SURF4-204ENST00000465565 SMARCA4P51532 1647 aa37.27■■■■□ 3.56
SURF4-204ENST00000465565 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
SURF4-204ENST00000465565 MROH2BQ7Z745 1585 aa37.08■■■■□ 3.53
SURF4-204ENST00000465565 ATAD2BQ9ULI0 1458 aa37.06■■■■□ 3.52
SURF4-204ENST00000465565 NCAPD3P42695 1498 aa37.01■■■■□ 3.52
SURF4-204ENST00000465565 SMARCA2P51531 1590 aa36.98■■■■□ 3.51
SURF4-204ENST00000465565 PEG3Q9GZU2 1588 aa36.91■■■■□ 3.5
SURF4-204ENST00000465565 HMGXB3Q12766 1538 aa36.81■■■■□ 3.48
SURF4-204ENST00000465565 BAZ1BQ9UIG0 1483 aaKnown RBP36.73■■■■□ 3.47
SURF4-204ENST00000465565 RSF1Q96T23 1441 aaPredicted RBP36.72■■■■□ 3.47
SURF4-204ENST00000465565 WIZO95785 1651 aa36.67■■■■□ 3.46
SURF4-204ENST00000465565 TOP2AP11388 1531 aaKnown RBP36.28■■■■□ 3.4
SURF4-204ENST00000465565 NESP48681 1621 aa36.07■■■■□ 3.36
SURF4-204ENST00000465565 LAMC3Q9Y6N6 1575 aa35.98■■■■□ 3.35
SURF4-204ENST00000465565 CADPSQ9ULU8 1353 aa35.95■■■■□ 3.35
SURF4-204ENST00000465565 SUPT5HO00267 1087 aaKnown RBP35.9■■■■□ 3.34
SURF4-204ENST00000465565 CCDC88BA6NC98 1476 aa35.89■■■■□ 3.34
SURF4-204ENST00000465565 ERCC6Q03468 1493 aa35.83■■■■□ 3.33
SURF4-204ENST00000465565 CFTRP13569 1480 aa35.75■■■■□ 3.31
SURF4-204ENST00000465565 PDS5BQ9NTI5 1447 aa35.74■■■■□ 3.31
SURF4-204ENST00000465565 KIF21AQ7Z4S6 1674 aa35.61■■■■□ 3.29
SURF4-204ENST00000465565 FANCD2Q9BXW9 1451 aa35.51■■■■□ 3.28
SURF4-204ENST00000465565 THOC2Q8NI27 1593 aaKnown RBP35.47■■■■□ 3.27
SURF4-204ENST00000465565 PRDM2Q13029 1718 aa35.44■■■■□ 3.26
SURF4-204ENST00000465565 CEP164Q9UPV0 1460 aa35.43■■■■□ 3.26
SURF4-204ENST00000465565 CUX2O14529 1486 aa35.41■■■■□ 3.26
SURF4-204ENST00000465565 MRC2Q9UBG0 1479 aa35.36■■■■□ 3.25
SURF4-204ENST00000465565 WDR62O43379 1518 aa35.24■■■■□ 3.23
SURF4-204ENST00000465565 URB2Q14146 1524 aaKnown RBP35.16■■■■□ 3.22
SURF4-204ENST00000465565 ABCC8Q09428 1581 aa34.97■■■■□ 3.19
SURF4-204ENST00000465565 TOPBP1Q92547 1522 aa34.96■■■■□ 3.19
SURF4-204ENST00000465565 DNMBPQ6XZF7 1577 aa34.92■■■■□ 3.18
SURF4-204ENST00000465565 CUX1P39880 1505 aa34.76■■■■□ 3.16
SURF4-204ENST00000465565 IFT140Q96RY7 1462 aa34.71■■■■□ 3.15
SURF4-204ENST00000465565 POLA1P09884 1462 aaPredicted RBP34.68■■■■□ 3.14
SURF4-204ENST00000465565 FGD5Q6ZNL6 1462 aa34.62■■■■□ 3.13
SURF4-204ENST00000465565 WRNQ14191 1432 aaPredicted RBP eCLIP34.59■■■■□ 3.13
SURF4-204ENST00000465565 TARBP1Q13395 1621 aaKnown RBP34.56■■■■□ 3.12
SURF4-204ENST00000465565 SOGA1O94964 1423 aa34.55■■■■□ 3.12
SURF4-204ENST00000465565 ZNF608Q9ULD9 1512 aaPredicted RBP34.55■■■■□ 3.12
SURF4-204ENST00000465565 RAD54L2Q9Y4B4 1467 aa34.54■■■■□ 3.12
SURF4-204ENST00000465565 SYNJ1O43426 1573 aa34.49■■■■□ 3.11
SURF4-204ENST00000465565 TOP2BQ02880 1626 aa34.49■■■■□ 3.11
SURF4-204ENST00000465565 BIVM-ERCC5R4GMW8 1640 aa34.48■■■■□ 3.11
SURF4-204ENST00000465565 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.12e-7■■■□□ 17.8
SURF4-204ENST00000465565 EIF4G3O43432 1585 aaKnown RBP34.38■■■■□ 3.09
SURF4-204ENST00000465565 TDRD9Q8NDG6 1382 aaKnown RBP34.35■■■■□ 3.09
SURF4-204ENST00000465565 WDR97A6NE52 1622 aa34.3■■■■□ 3.08
SURF4-204ENST00000465565 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
SURF4-204ENST00000465565 DNAJC5Q9H3Z4 198 aa34.2■■■■□ 3.07
SURF4-204ENST00000465565 GAPVD1Q14C86 1478 aa34.14■■■■□ 3.06
SURF4-204ENST00000465565 ABCA5Q8WWZ7 1642 aa34.12■■■■□ 3.05
SURF4-204ENST00000465565 GRIN2BQ13224 1484 aa34.11■■■■□ 3.05
SURF4-204ENST00000465565 SNAPC4Q5SXM2 1469 aa34.04■■■■□ 3.04
SURF4-204ENST00000465565 PBRM1Q86U86 1689 aa34.03■■■■□ 3.04
SURF4-204ENST00000465565 OSCARQ8IYS5 282 aa34.02■■■■□ 3.04
SURF4-204ENST00000465565 MAGI1Q96QZ7 1491 aaPredicted RBP34■■■■□ 3.03
SURF4-204ENST00000465565 FBLN2P98095 1184 aa33.93■■■■□ 3.02
SURF4-204ENST00000465565 CHD1O14646 1710 aa33.92■■■■□ 3.02
SURF4-204ENST00000465565 TRIM41Q8WV44 630 aa33.91■■■■□ 3.02
SURF4-204ENST00000465565 ERICH3Q5RHP9 1530 aa33.88■■■■□ 3.01
SURF4-204ENST00000465565 CHMP7Q8WUX9 453 aaPredicted RBP33.87■■■■□ 3.01
SURF4-204ENST00000465565 SYNJ2O15056 1496 aa33.87■■■■□ 3.01
SURF4-204ENST00000465565 KIF27Q86VH2 1401 aa33.87■■■■□ 3.01
SURF4-204ENST00000465565 ADAMTS12P58397 1594 aa33.78■■■■□ 3
SURF4-204ENST00000465565 FHAD1B1AJZ9 1412 aa33.76■■■□□ 2.99
SURF4-204ENST00000465565 IGF1RP08069 1367 aa33.74■■■□□ 2.99
SURF4-204ENST00000465565 GRIN2AQ12879 1464 aa33.67■■■□□ 2.98
SURF4-204ENST00000465565 RUSC2Q8N2Y8 1516 aa33.63■■■□□ 2.97
SURF4-204ENST00000465565 CHIC1Q5VXU3 224 aa33.62■■■□□ 2.97
SURF4-204ENST00000465565 CLASP1Q7Z460 1538 aa33.58■■■□□ 2.97
SURF4-204ENST00000465565 CUL7Q14999 1698 aa33.58■■■□□ 2.97
SURF4-204ENST00000465565 NUP160Q12769 1436 aa33.53■■■□□ 2.96
SURF4-204ENST00000465565 CARMIL1Q5VZK9 1371 aa33.53■■■□□ 2.96
SURF4-204ENST00000465565 CEP170Q5SW79 1584 aa33.5■■■□□ 2.95
SURF4-204ENST00000465565 ARHGEF11O15085 1522 aa33.43■■■□□ 2.94
SURF4-204ENST00000465565 RIMBP3CA6NJZ7 1639 aa33.41■■■□□ 2.94
SURF4-204ENST00000465565 RIMBP3BA6NNM3 1639 aa33.41■■■□□ 2.94
SURF4-204ENST00000465565 RIMBP3Q9UFD9 1639 aa33.41■■■□□ 2.94
SURF4-204ENST00000465565 RAPGEF2Q9Y4G8 1499 aa33.33■■■□□ 2.93
SURF4-204ENST00000465565 EEA1Q15075 1411 aa33.3■■■□□ 2.92
SURF4-204ENST00000465565 CSRNP3Q8WYN3 585 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms