RNA–Protein interactions for RNA: ENST00000465524.5

NUCB1-209, Transcript of nucleobindin 1, humanhuman

TSL 5

Gene NUCB1, Length 839 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-209ENST00000465524 NISCHQ9Y2I1 1504 aa38.84■■■■□ 3.81
NUCB1-209ENST00000465524 ABCC9O60706 1549 aa36.7■■■■□ 3.47
NUCB1-209ENST00000465524 DNAJC5BQ9UF47 199 aa35.67■■■■□ 3.3
NUCB1-209ENST00000465524 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
NUCB1-209ENST00000465524 RB1CC1Q8TDY2 1594 aa34.32■■■■□ 3.09
NUCB1-209ENST00000465524 PABPN1Q86U42 306 aaKnown RBP eCLIP33.94■■■■□ 3.02
NUCB1-209ENST00000465524 NACADO15069 1562 aa33.77■■■■□ 3
NUCB1-209ENST00000465524 DNAJC5Q9H3Z4 198 aa33.65■■■□□ 2.98
NUCB1-209ENST00000465524 UNC13AQ9UPW8 1703 aa33.64■■■□□ 2.98
NUCB1-209ENST00000465524 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
NUCB1-209ENST00000465524 DCAF8L2P0C7V8 631 aa33.23■■■□□ 2.91
NUCB1-209ENST00000465524 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
NUCB1-209ENST00000465524 CC2D2AQ9P2K1 1620 aa33.1■■■□□ 2.89
NUCB1-209ENST00000465524 MYO15BQ96JP2 1530 aa32.89■■■□□ 2.86
NUCB1-209ENST00000465524 SHROOM4Q9ULL8 1493 aa32.79■■■□□ 2.84
NUCB1-209ENST00000465524 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.83
NUCB1-209ENST00000465524 SCRIBQ14160 1630 aa32.19■■■□□ 2.74
NUCB1-209ENST00000465524 CUX2O14529 1486 aa32.16■■■□□ 2.74
NUCB1-209ENST00000465524 ZCCHC6Q5VYS8 1495 aaKnown RBP32.1■■■□□ 2.73
NUCB1-209ENST00000465524 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
NUCB1-209ENST00000465524 ERCC6Q03468 1493 aa31.72■■■□□ 2.67
NUCB1-209ENST00000465524 TRIM41Q8WV44 630 aa31.57■■■□□ 2.64
NUCB1-209ENST00000465524 NCAPD3P42695 1498 aa31.22■■■□□ 2.59
NUCB1-209ENST00000465524 NESP48681 1621 aa31.19■■■□□ 2.58
NUCB1-209ENST00000465524 THOC2Q8NI27 1593 aaKnown RBP31.15■■■□□ 2.58
NUCB1-209ENST00000465524 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.54
NUCB1-209ENST00000465524 HMGXB3Q12766 1538 aa30.86■■■□□ 2.53
NUCB1-209ENST00000465524 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
NUCB1-209ENST00000465524 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
NUCB1-209ENST00000465524 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
NUCB1-209ENST00000465524 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
NUCB1-209ENST00000465524 BAZ1AQ9NRL2 1556 aaPredicted RBP30.56■■■□□ 2.48
NUCB1-209ENST00000465524 PDS5BQ9NTI5 1447 aa30.54■■■□□ 2.48
NUCB1-209ENST00000465524 BAZ1BQ9UIG0 1483 aaKnown RBP30.53■■■□□ 2.48
NUCB1-209ENST00000465524 OSCARQ8IYS5 282 aa30.42■■■□□ 2.46
NUCB1-209ENST00000465524 MRC2Q9UBG0 1479 aa30.39■■■□□ 2.46
NUCB1-209ENST00000465524 WDR62O43379 1518 aa30.39■■■□□ 2.46
NUCB1-209ENST00000465524 PEG3Q9GZU2 1588 aa30.31■■■□□ 2.44
NUCB1-209ENST00000465524 RIMBP3CA6NJZ7 1639 aa30.26■■■□□ 2.44
NUCB1-209ENST00000465524 RIMBP3BA6NNM3 1639 aa30.26■■■□□ 2.44
NUCB1-209ENST00000465524 RIMBP3Q9UFD9 1639 aa30.26■■■□□ 2.44
NUCB1-209ENST00000465524 CADPSQ9ULU8 1353 aa30.17■■■□□ 2.42
NUCB1-209ENST00000465524 ARHGEF11O15085 1522 aa30.01■■■□□ 2.39
NUCB1-209ENST00000465524 CEP164Q9UPV0 1460 aa29.99■■■□□ 2.39
NUCB1-209ENST00000465524 AEBP2Q6ZN18 517 aaPredicted RBP29.94■■■□□ 2.38
NUCB1-209ENST00000465524 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
NUCB1-209ENST00000465524 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
NUCB1-209ENST00000465524 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
NUCB1-209ENST00000465524 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
NUCB1-209ENST00000465524 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
NUCB1-209ENST00000465524 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
NUCB1-209ENST00000465524 CFTRP13569 1480 aa29.59■■■□□ 2.33
NUCB1-209ENST00000465524 ZNF608Q9ULD9 1512 aaPredicted RBP29.59■■■□□ 2.33
NUCB1-209ENST00000465524 WIZO95785 1651 aa29.51■■■□□ 2.31
NUCB1-209ENST00000465524 IFT140Q96RY7 1462 aa29.44■■■□□ 2.3
NUCB1-209ENST00000465524 CHD1O14646 1710 aa29.39■■■□□ 2.3
NUCB1-209ENST00000465524 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
NUCB1-209ENST00000465524 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
NUCB1-209ENST00000465524 PRDM2Q13029 1718 aa29.19■■■□□ 2.26
NUCB1-209ENST00000465524 TOPBP1Q92547 1522 aa29.16■■■□□ 2.26
NUCB1-209ENST00000465524 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.251e-6■■■□□ 17.5
NUCB1-209ENST00000465524 FBLN2P98095 1184 aa29.1■■■□□ 2.25
NUCB1-209ENST00000465524 TOP2AP11388 1531 aaKnown RBP29.09■■■□□ 2.25
NUCB1-209ENST00000465524 TARBP1Q13395 1621 aaKnown RBP29.04■■■□□ 2.24
NUCB1-209ENST00000465524 CLASP1Q7Z460 1538 aa29.03■■■□□ 2.24
NUCB1-209ENST00000465524 ILDR1Q86SU0 546 aaPredicted RBP28.96■■■□□ 2.23
NUCB1-209ENST00000465524 ABCC8Q09428 1581 aa28.94■■■□□ 2.22
NUCB1-209ENST00000465524 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
NUCB1-209ENST00000465524 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
NUCB1-209ENST00000465524 SYNJ1O43426 1573 aa28.82■■■□□ 2.2
NUCB1-209ENST00000465524 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
NUCB1-209ENST00000465524 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
NUCB1-209ENST00000465524 GAPVD1Q14C86 1478 aa28.78■■■□□ 2.2
NUCB1-209ENST00000465524 TDRD9Q8NDG6 1382 aaKnown RBP28.72■■■□□ 2.19
NUCB1-209ENST00000465524 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
NUCB1-209ENST00000465524 CHMP7Q8WUX9 453 aaPredicted RBP28.68■■■□□ 2.18
NUCB1-209ENST00000465524 MAGI1Q96QZ7 1491 aaPredicted RBP28.62■■■□□ 2.17
NUCB1-209ENST00000465524 WDR97A6NE52 1622 aa28.58■■■□□ 2.17
NUCB1-209ENST00000465524 SOGA1O94964 1423 aa28.58■■■□□ 2.17
NUCB1-209ENST00000465524 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
NUCB1-209ENST00000465524 KIF13AQ9H1H9 1805 aa28.55■■■□□ 2.16
NUCB1-209ENST00000465524 ERCC6L2Q5T890 1561 aa28.51■■■□□ 2.15
NUCB1-209ENST00000465524 KDM4FA0A1W2PPD8 638 aa28.5■■■□□ 2.15
NUCB1-209ENST00000465524 GRIN2BQ13224 1484 aa28.49■■■□□ 2.15
NUCB1-209ENST00000465524 FGD5Q6ZNL6 1462 aa28.4■■■□□ 2.14
NUCB1-209ENST00000465524 PBRM1Q86U86 1689 aa28.33■■■□□ 2.13
NUCB1-209ENST00000465524 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
NUCB1-209ENST00000465524 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
NUCB1-209ENST00000465524 CUX1P39880 1505 aa28.2■■■□□ 2.1
NUCB1-209ENST00000465524 ABCC10Q5T3U5 1492 aa28.17■■■□□ 2.1
NUCB1-209ENST00000465524 SHROOM2Q13796 1616 aa28.17■■■□□ 2.1
NUCB1-209ENST00000465524 FAM69CQ0P6D2 419 aa28.16■■■□□ 2.1
NUCB1-209ENST00000465524 KDM6BO15054 1643 aa28.16■■■□□ 2.1
NUCB1-209ENST00000465524 GRIN2AQ12879 1464 aa28.14■■■□□ 2.09
NUCB1-209ENST00000465524 NUP160Q12769 1436 aa28.12■■■□□ 2.09
NUCB1-209ENST00000465524 ABCA5Q8WWZ7 1642 aa28.11■■■□□ 2.09
NUCB1-209ENST00000465524 DIP2BQ9P265 1576 aa28.09■■■□□ 2.09
NUCB1-209ENST00000465524 MAPKBP1O60336 1514 aa28.02■■■□□ 2.08
NUCB1-209ENST00000465524 HECW2Q9P2P5 1572 aa28■■■□□ 2.07
NUCB1-209ENST00000465524 ABCA10Q8WWZ4 1543 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms