RNA–Protein interactions for RNA: ENST00000465356.1

PCNT-203, Transcript of pericentrin, humanhuman

TSL 2

Gene PCNT, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNT-203ENST00000465356 NISCHQ9Y2I1 1504 aa29.02■■■□□ 2.24
PCNT-203ENST00000465356 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
PCNT-203ENST00000465356 ABCC9O60706 1549 aa25.54■■□□□ 1.68
PCNT-203ENST00000465356 RB1CC1Q8TDY2 1594 aa24.58■■□□□ 1.52
PCNT-203ENST00000465356 NACADO15069 1562 aa24.49■■□□□ 1.51
PCNT-203ENST00000465356 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
PCNT-203ENST00000465356 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
PCNT-203ENST00000465356 DCAF8L2P0C7V8 631 aa24.13■■□□□ 1.45
PCNT-203ENST00000465356 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
PCNT-203ENST00000465356 UNC13AQ9UPW8 1703 aa24.06■■□□□ 1.44
PCNT-203ENST00000465356 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
PCNT-203ENST00000465356 PABPN1Q86U42 306 aaKnown RBP eCLIP23.73■■□□□ 1.39
PCNT-203ENST00000465356 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
PCNT-203ENST00000465356 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
PCNT-203ENST00000465356 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
PCNT-203ENST00000465356 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
PCNT-203ENST00000465356 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
PCNT-203ENST00000465356 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
PCNT-203ENST00000465356 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
PCNT-203ENST00000465356 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
PCNT-203ENST00000465356 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
PCNT-203ENST00000465356 SMARCA2P51531 1590 aa22.53■■□□□ 1.2
PCNT-203ENST00000465356 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
PCNT-203ENST00000465356 HMGXB3Q12766 1538 aa22.48■■□□□ 1.19
PCNT-203ENST00000465356 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
PCNT-203ENST00000465356 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
PCNT-203ENST00000465356 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
PCNT-203ENST00000465356 WIZO95785 1651 aa22.1■■□□□ 1.13
PCNT-203ENST00000465356 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
PCNT-203ENST00000465356 LAMC3Q9Y6N6 1575 aa22.05■■□□□ 1.12
PCNT-203ENST00000465356 NESP48681 1621 aa22.03■■□□□ 1.12
PCNT-203ENST00000465356 CUX2O14529 1486 aa22.01■■□□□ 1.11
PCNT-203ENST00000465356 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
PCNT-203ENST00000465356 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
PCNT-203ENST00000465356 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
PCNT-203ENST00000465356 KIF21AQ7Z4S6 1674 aa21.87■■□□□ 1.09
PCNT-203ENST00000465356 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
PCNT-203ENST00000465356 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
PCNT-203ENST00000465356 CFTRP13569 1480 aa21.69■■□□□ 1.06
PCNT-203ENST00000465356 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
PCNT-203ENST00000465356 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
PCNT-203ENST00000465356 WDR62O43379 1518 aa21.63■■□□□ 1.05
PCNT-203ENST00000465356 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
PCNT-203ENST00000465356 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
PCNT-203ENST00000465356 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
PCNT-203ENST00000465356 DNAJC5Q9H3Z4 198 aa21.54■■□□□ 1.04
PCNT-203ENST00000465356 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
PCNT-203ENST00000465356 ABCC8Q09428 1581 aa21.27■□□□□ 0.99
PCNT-203ENST00000465356 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
PCNT-203ENST00000465356 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
PCNT-203ENST00000465356 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
PCNT-203ENST00000465356 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
PCNT-203ENST00000465356 ZNF608Q9ULD9 1512 aaPredicted RBP21.06■□□□□ 0.96
PCNT-203ENST00000465356 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
PCNT-203ENST00000465356 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
PCNT-203ENST00000465356 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
PCNT-203ENST00000465356 CUX1P39880 1505 aa20.98■□□□□ 0.95
PCNT-203ENST00000465356 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
PCNT-203ENST00000465356 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
PCNT-203ENST00000465356 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
PCNT-203ENST00000465356 SOGA1O94964 1423 aa20.9■□□□□ 0.94
PCNT-203ENST00000465356 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
PCNT-203ENST00000465356 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.932e-7■■■■■ 155.9
PCNT-203ENST00000465356 CHD1O14646 1710 aa20.86■□□□□ 0.93
PCNT-203ENST00000465356 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
PCNT-203ENST00000465356 TDRD9Q8NDG6 1382 aaKnown RBP20.78■□□□□ 0.92
PCNT-203ENST00000465356 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
PCNT-203ENST00000465356 ABCA10Q8WWZ4 1543 aa20.76■□□□□ 0.91
PCNT-203ENST00000465356 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
PCNT-203ENST00000465356 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
PCNT-203ENST00000465356 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
PCNT-203ENST00000465356 ABCA5Q8WWZ7 1642 aa20.74■□□□□ 0.91
PCNT-203ENST00000465356 SNAPC4Q5SXM2 1469 aa20.73■□□□□ 0.91
PCNT-203ENST00000465356 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
PCNT-203ENST00000465356 RIMBP3CA6NJZ7 1639 aa20.72■□□□□ 0.91
PCNT-203ENST00000465356 RIMBP3BA6NNM3 1639 aa20.72■□□□□ 0.91
PCNT-203ENST00000465356 RIMBP3Q9UFD9 1639 aa20.72■□□□□ 0.91
PCNT-203ENST00000465356 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
PCNT-203ENST00000465356 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
PCNT-203ENST00000465356 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
PCNT-203ENST00000465356 SYNJ2O15056 1496 aa20.65■□□□□ 0.9
PCNT-203ENST00000465356 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
PCNT-203ENST00000465356 FBLN2P98095 1184 aa20.61■□□□□ 0.89
PCNT-203ENST00000465356 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
PCNT-203ENST00000465356 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
PCNT-203ENST00000465356 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
PCNT-203ENST00000465356 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
PCNT-203ENST00000465356 GRIN2AQ12879 1464 aa20.48■□□□□ 0.87
PCNT-203ENST00000465356 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
PCNT-203ENST00000465356 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
PCNT-203ENST00000465356 NUP160Q12769 1436 aa20.41■□□□□ 0.86
PCNT-203ENST00000465356 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
PCNT-203ENST00000465356 CYB5RLQ6IPT4 315 aa20.36■□□□□ 0.85
PCNT-203ENST00000465356 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
PCNT-203ENST00000465356 CUL7Q14999 1698 aa20.33■□□□□ 0.85
PCNT-203ENST00000465356 KIF27Q86VH2 1401 aa20.31■□□□□ 0.84
PCNT-203ENST00000465356 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.83
PCNT-203ENST00000465356 ERCC6L2Q5T890 1561 aa20.23■□□□□ 0.83
PCNT-203ENST00000465356 IGF1RP08069 1367 aa20.22■□□□□ 0.83
PCNT-203ENST00000465356 KIAA0586Q9BVV6 1533 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms