RNA–Protein interactions for RNA: ENST00000465200.5

LCLAT1-204, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-204ENST00000465200 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
LCLAT1-204ENST00000465200 ABCC9O60706 1549 aa22.93■■□□□ 1.26
LCLAT1-204ENST00000465200 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
LCLAT1-204ENST00000465200 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
LCLAT1-204ENST00000465200 RB1CC1Q8TDY2 1594 aa21.48■■□□□ 1.03
LCLAT1-204ENST00000465200 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
LCLAT1-204ENST00000465200 NACADO15069 1562 aa21.14■□□□□ 0.98
LCLAT1-204ENST00000465200 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
LCLAT1-204ENST00000465200 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
LCLAT1-204ENST00000465200 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
LCLAT1-204ENST00000465200 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
LCLAT1-204ENST00000465200 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
LCLAT1-204ENST00000465200 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
LCLAT1-204ENST00000465200 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
LCLAT1-204ENST00000465200 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
LCLAT1-204ENST00000465200 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
LCLAT1-204ENST00000465200 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
LCLAT1-204ENST00000465200 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
LCLAT1-204ENST00000465200 SCRIBQ14160 1630 aa20.27■□□□□ 0.83
LCLAT1-204ENST00000465200 CUX2O14529 1486 aa19.99■□□□□ 0.79
LCLAT1-204ENST00000465200 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
LCLAT1-204ENST00000465200 TRIM41Q8WV44 630 aa19.64■□□□□ 0.73
LCLAT1-204ENST00000465200 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
LCLAT1-204ENST00000465200 NESP48681 1621 aa19.5■□□□□ 0.71
LCLAT1-204ENST00000465200 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
LCLAT1-204ENST00000465200 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
LCLAT1-204ENST00000465200 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
LCLAT1-204ENST00000465200 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
LCLAT1-204ENST00000465200 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
LCLAT1-204ENST00000465200 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
LCLAT1-204ENST00000465200 LAMC3Q9Y6N6 1575 aa19.2■□□□□ 0.66
LCLAT1-204ENST00000465200 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
LCLAT1-204ENST00000465200 PDS5BQ9NTI5 1447 aa19.15■□□□□ 0.66
LCLAT1-204ENST00000465200 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
LCLAT1-204ENST00000465200 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
LCLAT1-204ENST00000465200 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
LCLAT1-204ENST00000465200 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
LCLAT1-204ENST00000465200 WDR62O43379 1518 aa18.98■□□□□ 0.63
LCLAT1-204ENST00000465200 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
LCLAT1-204ENST00000465200 MROH2BQ7Z745 1585 aa18.95■□□□□ 0.62
LCLAT1-204ENST00000465200 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
LCLAT1-204ENST00000465200 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.6
LCLAT1-204ENST00000465200 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
LCLAT1-204ENST00000465200 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
LCLAT1-204ENST00000465200 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
LCLAT1-204ENST00000465200 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
LCLAT1-204ENST00000465200 FANCD2Q9BXW9 1451 aa18.75■□□□□ 0.59
LCLAT1-204ENST00000465200 WIZO95785 1651 aa18.73■□□□□ 0.59
LCLAT1-204ENST00000465200 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
LCLAT1-204ENST00000465200 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
LCLAT1-204ENST00000465200 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
LCLAT1-204ENST00000465200 CYB5RLQ6IPT4 315 aa18.62■□□□□ 0.57
LCLAT1-204ENST00000465200 URB2Q14146 1524 aaKnown RBP18.62■□□□□ 0.57
LCLAT1-204ENST00000465200 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
LCLAT1-204ENST00000465200 CFTRP13569 1480 aa18.57■□□□□ 0.56
LCLAT1-204ENST00000465200 ZNF608Q9ULD9 1512 aaPredicted RBP18.52■□□□□ 0.56
LCLAT1-204ENST00000465200 ARAP1Q96P48 1450 aa18.46■□□□□ 0.55
LCLAT1-204ENST00000465200 IFT140Q96RY7 1462 aa18.46■□□□□ 0.55
LCLAT1-204ENST00000465200 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
LCLAT1-204ENST00000465200 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
LCLAT1-204ENST00000465200 FBLN2P98095 1184 aa18.34■□□□□ 0.53
LCLAT1-204ENST00000465200 CHD1O14646 1710 aa18.33■□□□□ 0.52
LCLAT1-204ENST00000465200 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
LCLAT1-204ENST00000465200 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.52
LCLAT1-204ENST00000465200 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
LCLAT1-204ENST00000465200 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
LCLAT1-204ENST00000465200 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
LCLAT1-204ENST00000465200 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
LCLAT1-204ENST00000465200 CLASP1Q7Z460 1538 aa18.11■□□□□ 0.49
LCLAT1-204ENST00000465200 POLA1P09884 1462 aaPredicted RBP18.08■□□□□ 0.49
LCLAT1-204ENST00000465200 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
LCLAT1-204ENST00000465200 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
LCLAT1-204ENST00000465200 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
LCLAT1-204ENST00000465200 CHMP7Q8WUX9 453 aaPredicted RBP18.05■□□□□ 0.48
LCLAT1-204ENST00000465200 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
LCLAT1-204ENST00000465200 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
LCLAT1-204ENST00000465200 SOGA1O94964 1423 aa17.99■□□□□ 0.47
LCLAT1-204ENST00000465200 MAGI1Q96QZ7 1491 aaPredicted RBP17.96■□□□□ 0.47
LCLAT1-204ENST00000465200 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
LCLAT1-204ENST00000465200 GRIN2BQ13224 1484 aa17.91■□□□□ 0.46
LCLAT1-204ENST00000465200 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
LCLAT1-204ENST00000465200 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
LCLAT1-204ENST00000465200 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
LCLAT1-204ENST00000465200 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
LCLAT1-204ENST00000465200 ILDR1Q86SU0 546 aaPredicted RBP17.86■□□□□ 0.45
LCLAT1-204ENST00000465200 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
LCLAT1-204ENST00000465200 CUX1P39880 1505 aa17.77■□□□□ 0.43
LCLAT1-204ENST00000465200 PBRM1Q86U86 1689 aa17.76■□□□□ 0.43
LCLAT1-204ENST00000465200 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
LCLAT1-204ENST00000465200 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
LCLAT1-204ENST00000465200 KIF13AQ9H1H9 1805 aa17.71■□□□□ 0.43
LCLAT1-204ENST00000465200 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
LCLAT1-204ENST00000465200 KDM4FA0A1W2PPD8 638 aa17.68■□□□□ 0.42
LCLAT1-204ENST00000465200 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
LCLAT1-204ENST00000465200 FAM69CQ0P6D2 419 aa17.65■□□□□ 0.42
LCLAT1-204ENST00000465200 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
LCLAT1-204ENST00000465200 NUP160Q12769 1436 aa17.62■□□□□ 0.41
LCLAT1-204ENST00000465200 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
LCLAT1-204ENST00000465200 SHROOM2Q13796 1616 aa17.59■□□□□ 0.41
LCLAT1-204ENST00000465200 ABCC10Q5T3U5 1492 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms