RNA–Protein interactions for RNA: ENST00000465108.5

UBA3-207, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 804 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-207ENST00000465108 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
UBA3-207ENST00000465108 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
UBA3-207ENST00000465108 ABCC9O60706 1549 aa28.71■■■□□ 2.19
UBA3-207ENST00000465108 AEBP2Q6ZN18 517 aaPredicted RBP28.1■■■□□ 2.09
UBA3-207ENST00000465108 DCAF8L2P0C7V8 631 aa27.9■■■□□ 2.06
UBA3-207ENST00000465108 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
UBA3-207ENST00000465108 RB1CC1Q8TDY2 1594 aa27.62■■■□□ 2.01
UBA3-207ENST00000465108 NACADO15069 1562 aa27.6■■■□□ 2.01
UBA3-207ENST00000465108 MYO15BQ96JP2 1530 aa27.41■■□□□ 1.98
UBA3-207ENST00000465108 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
UBA3-207ENST00000465108 CHIC1Q5VXU3 224 aa27.18■■□□□ 1.94
UBA3-207ENST00000465108 UNC13AQ9UPW8 1703 aa26.99■■□□□ 1.91
UBA3-207ENST00000465108 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
UBA3-207ENST00000465108 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
UBA3-207ENST00000465108 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
UBA3-207ENST00000465108 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
UBA3-207ENST00000465108 DNAJC5BQ9UF47 199 aa26.18■■□□□ 1.78
UBA3-207ENST00000465108 EIF4G1Q04637 1599 aaKnown RBP26.05■■□□□ 1.76
UBA3-207ENST00000465108 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
UBA3-207ENST00000465108 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
UBA3-207ENST00000465108 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
UBA3-207ENST00000465108 SMARCA4P51532 1647 aa25.7■■□□□ 1.71
UBA3-207ENST00000465108 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
UBA3-207ENST00000465108 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
UBA3-207ENST00000465108 SMARCA2P51531 1590 aa25.51■■□□□ 1.67
UBA3-207ENST00000465108 NCAPD3P42695 1498 aa25.46■■□□□ 1.67
UBA3-207ENST00000465108 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
UBA3-207ENST00000465108 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
UBA3-207ENST00000465108 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
UBA3-207ENST00000465108 WIZO95785 1651 aa25.36■■□□□ 1.65
UBA3-207ENST00000465108 HMGXB3Q12766 1538 aa25.33■■□□□ 1.65
UBA3-207ENST00000465108 TOP2AP11388 1531 aaKnown RBP25.06■■□□□ 1.6
UBA3-207ENST00000465108 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
UBA3-207ENST00000465108 NESP48681 1621 aa24.87■■□□□ 1.57
UBA3-207ENST00000465108 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
UBA3-207ENST00000465108 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
UBA3-207ENST00000465108 LAMC3Q9Y6N6 1575 aa24.77■■□□□ 1.56
UBA3-207ENST00000465108 ERCC6Q03468 1493 aa24.76■■□□□ 1.55
UBA3-207ENST00000465108 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
UBA3-207ENST00000465108 CFTRP13569 1480 aa24.63■■□□□ 1.53
UBA3-207ENST00000465108 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
UBA3-207ENST00000465108 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
UBA3-207ENST00000465108 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
UBA3-207ENST00000465108 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
UBA3-207ENST00000465108 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
UBA3-207ENST00000465108 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
UBA3-207ENST00000465108 CUX2O14529 1486 aa24.32■■□□□ 1.48
UBA3-207ENST00000465108 WDR62O43379 1518 aa24.24■■□□□ 1.47
UBA3-207ENST00000465108 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
UBA3-207ENST00000465108 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
UBA3-207ENST00000465108 ABCC8Q09428 1581 aa24.11■■□□□ 1.45
UBA3-207ENST00000465108 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
UBA3-207ENST00000465108 CUX1P39880 1505 aa24■■□□□ 1.43
UBA3-207ENST00000465108 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
UBA3-207ENST00000465108 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
UBA3-207ENST00000465108 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
UBA3-207ENST00000465108 POLA1P09884 1462 aaPredicted RBP23.92■■□□□ 1.42
UBA3-207ENST00000465108 FGD5Q6ZNL6 1462 aa23.91■■□□□ 1.42
UBA3-207ENST00000465108 SOGA1O94964 1423 aa23.87■■□□□ 1.41
UBA3-207ENST00000465108 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
UBA3-207ENST00000465108 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
UBA3-207ENST00000465108 TOP2BQ02880 1626 aa23.82■■□□□ 1.4
UBA3-207ENST00000465108 ZNF608Q9ULD9 1512 aaPredicted RBP23.82■■□□□ 1.4
UBA3-207ENST00000465108 PHF23Q9BUL5 403 aaPredicted RBP23.81■■□□□ 1.4
UBA3-207ENST00000465108 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
UBA3-207ENST00000465108 BIVM-ERCC5R4GMW8 1640 aa23.81■■□□□ 1.4
UBA3-207ENST00000465108 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
UBA3-207ENST00000465108 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.391e-9■■■■■ 37.7
UBA3-207ENST00000465108 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
UBA3-207ENST00000465108 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.38
UBA3-207ENST00000465108 WDR97A6NE52 1622 aa23.63■■□□□ 1.37
UBA3-207ENST00000465108 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
UBA3-207ENST00000465108 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
UBA3-207ENST00000465108 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
UBA3-207ENST00000465108 FBLN2P98095 1184 aa23.54■■□□□ 1.36
UBA3-207ENST00000465108 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
UBA3-207ENST00000465108 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
UBA3-207ENST00000465108 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
UBA3-207ENST00000465108 OSCARQ8IYS5 282 aa23.45■■□□□ 1.34
UBA3-207ENST00000465108 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
UBA3-207ENST00000465108 MAGI1Q96QZ7 1491 aaPredicted RBP23.43■■□□□ 1.34
UBA3-207ENST00000465108 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
UBA3-207ENST00000465108 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
UBA3-207ENST00000465108 CHD1O14646 1710 aa23.41■■□□□ 1.34
UBA3-207ENST00000465108 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
UBA3-207ENST00000465108 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
UBA3-207ENST00000465108 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
UBA3-207ENST00000465108 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
UBA3-207ENST00000465108 IGF1RP08069 1367 aa23.29■■□□□ 1.32
UBA3-207ENST00000465108 RUSC2Q8N2Y8 1516 aa23.29■■□□□ 1.32
UBA3-207ENST00000465108 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
UBA3-207ENST00000465108 CUL7Q14999 1698 aa23.2■■□□□ 1.3
UBA3-207ENST00000465108 CARMIL1Q5VZK9 1371 aa23.2■■□□□ 1.3
UBA3-207ENST00000465108 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
UBA3-207ENST00000465108 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
UBA3-207ENST00000465108 CSRNP3Q8WYN3 585 aa23.1■■□□□ 1.29
UBA3-207ENST00000465108 NUP160Q12769 1436 aa23.08■■□□□ 1.29
UBA3-207ENST00000465108 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.29
UBA3-207ENST00000465108 EEA1Q15075 1411 aa23.07■■□□□ 1.28
UBA3-207ENST00000465108 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms