RNA–Protein interactions for RNA: ENST00000464732.1

GFM1-203, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 3

Gene GFM1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-203ENST00000464732 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
GFM1-203ENST00000464732 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
GFM1-203ENST00000464732 ABCC9O60706 1549 aa16.41■□□□□ 0.22
GFM1-203ENST00000464732 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
GFM1-203ENST00000464732 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
GFM1-203ENST00000464732 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
GFM1-203ENST00000464732 NACADO15069 1562 aa15.96■□□□□ 0.14
GFM1-203ENST00000464732 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
GFM1-203ENST00000464732 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
GFM1-203ENST00000464732 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
GFM1-203ENST00000464732 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
GFM1-203ENST00000464732 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
GFM1-203ENST00000464732 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
GFM1-203ENST00000464732 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
GFM1-203ENST00000464732 CECR2Q9BXF3 1484 aa15.13■□□□□ 0.01
GFM1-203ENST00000464732 MROH2BQ7Z745 1585 aa14.99□□□□□ -0.01
GFM1-203ENST00000464732 BAZ1AQ9NRL2 1556 aaPredicted RBP14.99□□□□□ -0.01
GFM1-203ENST00000464732 SUPT5HO00267 1087 aaKnown RBP14.99□□□□□ -0.01
GFM1-203ENST00000464732 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
GFM1-203ENST00000464732 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
GFM1-203ENST00000464732 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
GFM1-203ENST00000464732 AEBP2Q6ZN18 517 aaPredicted RBP14.93□□□□□ -0.02
GFM1-203ENST00000464732 WIZO95785 1651 aa14.84□□□□□ -0.03
GFM1-203ENST00000464732 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
GFM1-203ENST00000464732 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
GFM1-203ENST00000464732 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
GFM1-203ENST00000464732 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
GFM1-203ENST00000464732 SMARCA2P51531 1590 aa14.77□□□□□ -0.04
GFM1-203ENST00000464732 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
GFM1-203ENST00000464732 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
GFM1-203ENST00000464732 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
GFM1-203ENST00000464732 HMGXB3Q12766 1538 aa14.65□□□□□ -0.06
GFM1-203ENST00000464732 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
GFM1-203ENST00000464732 CADPSQ9ULU8 1353 aa14.38□□□□□ -0.11
GFM1-203ENST00000464732 CFTRP13569 1480 aa14.33□□□□□ -0.12
GFM1-203ENST00000464732 NESP48681 1621 aa14.31□□□□□ -0.12
GFM1-203ENST00000464732 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
GFM1-203ENST00000464732 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
GFM1-203ENST00000464732 CHIC1Q5VXU3 224 aa14.2□□□□□ -0.14
GFM1-203ENST00000464732 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
GFM1-203ENST00000464732 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
GFM1-203ENST00000464732 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
GFM1-203ENST00000464732 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
GFM1-203ENST00000464732 CEP164Q9UPV0 1460 aa14.11□□□□□ -0.15
GFM1-203ENST00000464732 WRNQ14191 1432 aaPredicted RBP eCLIP14.09□□□□□ -0.15
GFM1-203ENST00000464732 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
GFM1-203ENST00000464732 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
GFM1-203ENST00000464732 CUX1P39880 1505 aa14.03□□□□□ -0.16
GFM1-203ENST00000464732 URB2Q14146 1524 aaKnown RBP14.01□□□□□ -0.17
GFM1-203ENST00000464732 MRC2Q9UBG0 1479 aa14.01□□□□□ -0.17
GFM1-203ENST00000464732 SYNJ1O43426 1573 aa14□□□□□ -0.17
GFM1-203ENST00000464732 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
GFM1-203ENST00000464732 TOP2BQ02880 1626 aa13.98□□□□□ -0.17
GFM1-203ENST00000464732 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
GFM1-203ENST00000464732 BIVM-ERCC5R4GMW8 1640 aa13.95□□□□□ -0.18
GFM1-203ENST00000464732 WDR62O43379 1518 aa13.92□□□□□ -0.18
GFM1-203ENST00000464732 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
GFM1-203ENST00000464732 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
GFM1-203ENST00000464732 SOGA1O94964 1423 aa13.9□□□□□ -0.18
GFM1-203ENST00000464732 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
GFM1-203ENST00000464732 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
GFM1-203ENST00000464732 FAM9AQ8IZU1 332 aaPredicted RBP13.86□□□□□ -0.19
GFM1-203ENST00000464732 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
GFM1-203ENST00000464732 CUX2O14529 1486 aa13.85□□□□□ -0.19
GFM1-203ENST00000464732 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
GFM1-203ENST00000464732 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
GFM1-203ENST00000464732 TDRD9Q8NDG6 1382 aaKnown RBP13.8□□□□□ -0.2
GFM1-203ENST00000464732 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
GFM1-203ENST00000464732 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
GFM1-203ENST00000464732 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
GFM1-203ENST00000464732 KIF27Q86VH2 1401 aa13.77□□□□□ -0.21
GFM1-203ENST00000464732 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.21
GFM1-203ENST00000464732 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
GFM1-203ENST00000464732 EEA1Q15075 1411 aa13.73□□□□□ -0.21
GFM1-203ENST00000464732 IGF1RP08069 1367 aa13.72□□□□□ -0.21
GFM1-203ENST00000464732 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
GFM1-203ENST00000464732 WDR97A6NE52 1622 aa13.71□□□□□ -0.22
GFM1-203ENST00000464732 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
GFM1-203ENST00000464732 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
GFM1-203ENST00000464732 ABCA5Q8WWZ7 1642 aa13.65□□□□□ -0.22
GFM1-203ENST00000464732 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
GFM1-203ENST00000464732 CARMIL1Q5VZK9 1371 aa13.64□□□□□ -0.23
GFM1-203ENST00000464732 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
GFM1-203ENST00000464732 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
GFM1-203ENST00000464732 PRXQ9BXM0 1461 aa13.6□□□□□ -0.23
GFM1-203ENST00000464732 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
GFM1-203ENST00000464732 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
GFM1-203ENST00000464732 FBLN2P98095 1184 aa13.57□□□□□ -0.24
GFM1-203ENST00000464732 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
GFM1-203ENST00000464732 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
GFM1-203ENST00000464732 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
GFM1-203ENST00000464732 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
GFM1-203ENST00000464732 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
GFM1-203ENST00000464732 CUL7Q14999 1698 aa13.53□□□□□ -0.24
GFM1-203ENST00000464732 KIF21BO75037 1637 aa13.53□□□□□ -0.24
GFM1-203ENST00000464732 GOLGA3Q08378 1498 aa13.52□□□□□ -0.25
GFM1-203ENST00000464732 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
GFM1-203ENST00000464732 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
GFM1-203ENST00000464732 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.25
GFM1-203ENST00000464732 GRIN2AQ12879 1464 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms