RNA–Protein interactions for RNA: ENST00000464631.6

SEC16B-204, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16B, Length 2,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-204ENST00000464631 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
SEC16B-204ENST00000464631 CCDC180Q9P1Z9 1646 aa16.82■□□□□ 0.28
SEC16B-204ENST00000464631 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
SEC16B-204ENST00000464631 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
SEC16B-204ENST00000464631 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
SEC16B-204ENST00000464631 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
SEC16B-204ENST00000464631 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
SEC16B-204ENST00000464631 ABCC9O60706 1549 aa16.1■□□□□ 0.17
SEC16B-204ENST00000464631 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
SEC16B-204ENST00000464631 HRCP23327 699 aa15.83■□□□□ 0.12
SEC16B-204ENST00000464631 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
SEC16B-204ENST00000464631 MYO15BQ96JP2 1530 aa15.79■□□□□ 0.12
SEC16B-204ENST00000464631 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
SEC16B-204ENST00000464631 NACADO15069 1562 aa15.69■□□□□ 0.1
SEC16B-204ENST00000464631 PCGF6Q9BYE7 350 aa15.63■□□□□ 0.09
SEC16B-204ENST00000464631 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
SEC16B-204ENST00000464631 PPARGC1BQ86YN6 1023 aaKnown RBP15.53■□□□□ 0.08
SEC16B-204ENST00000464631 LOC105371045A0A1W2PR82 267 aa15.33■□□□□ 0.04
SEC16B-204ENST00000464631 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
SEC16B-204ENST00000464631 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
SEC16B-204ENST00000464631 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
SEC16B-204ENST00000464631 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
SEC16B-204ENST00000464631 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
SEC16B-204ENST00000464631 BICRAQ9NZM4 1560 aa15.15■□□□□ 0.02
SEC16B-204ENST00000464631 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
SEC16B-204ENST00000464631 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
SEC16B-204ENST00000464631 FAM9AQ8IZU1 332 aaPredicted RBP15.05■□□□□ -0
SEC16B-204ENST00000464631 WIZO95785 1651 aa15.02■□□□□ -0
SEC16B-204ENST00000464631 BAZ1AQ9NRL2 1556 aaPredicted RBP15.01□□□□□ -0.01
SEC16B-204ENST00000464631 ZEB1P37275 1124 aaPredicted RBP14.97□□□□□ -0.01
SEC16B-204ENST00000464631 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
SEC16B-204ENST00000464631 PELP1Q8IZL8 1130 aaKnown RBP14.89□□□□□ -0.03
SEC16B-204ENST00000464631 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
SEC16B-204ENST00000464631 PHF23Q9BUL5 403 aaPredicted RBP14.85□□□□□ -0.03
SEC16B-204ENST00000464631 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
SEC16B-204ENST00000464631 TOP2AP11388 1531 aaKnown RBP14.77□□□□□ -0.04
SEC16B-204ENST00000464631 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
SEC16B-204ENST00000464631 CCDC88BA6NC98 1476 aa14.71□□□□□ -0.06
SEC16B-204ENST00000464631 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
SEC16B-204ENST00000464631 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
SEC16B-204ENST00000464631 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
SEC16B-204ENST00000464631 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
SEC16B-204ENST00000464631 TTBK1Q5TCY1 1321 aaPredicted RBP14.6□□□□□ -0.07
SEC16B-204ENST00000464631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
SEC16B-204ENST00000464631 ACIN1Q9UKV3 1341 aaKnown RBP14.55□□□□□ -0.08
SEC16B-204ENST00000464631 CCER1Q8TC90 406 aaPredicted RBP14.54□□□□□ -0.08
SEC16B-204ENST00000464631 NEUROD1Q13562 356 aa14.53□□□□□ -0.08
SEC16B-204ENST00000464631 SLC24A1O60721 1099 aa14.52□□□□□ -0.08
SEC16B-204ENST00000464631 NCAPD3P42695 1498 aa14.52□□□□□ -0.09
SEC16B-204ENST00000464631 ABCC8Q09428 1581 aa14.5□□□□□ -0.09
SEC16B-204ENST00000464631 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
SEC16B-204ENST00000464631 HMGXB3Q12766 1538 aa14.46□□□□□ -0.09
SEC16B-204ENST00000464631 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
SEC16B-204ENST00000464631 GTF3C3Q9Y5Q9 886 aa14.43□□□□□ -0.1
SEC16B-204ENST00000464631 CENPBP07199 599 aaPredicted RBP14.41□□□□□ -0.1
SEC16B-204ENST00000464631 WRNQ14191 1432 aaPredicted RBP eCLIP14.31□□□□□ -0.12
SEC16B-204ENST00000464631 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
SEC16B-204ENST00000464631 CEP162Q5TB80 1403 aa14.27□□□□□ -0.12
SEC16B-204ENST00000464631 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
SEC16B-204ENST00000464631 SOGA1O94964 1423 aa14.26□□□□□ -0.13
SEC16B-204ENST00000464631 CFTRP13569 1480 aa14.25□□□□□ -0.13
SEC16B-204ENST00000464631 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
SEC16B-204ENST00000464631 RUSC2Q8N2Y8 1516 aa14.24□□□□□ -0.13
SEC16B-204ENST00000464631 RANGAP1P46060 587 aaPredicted RBP14.24□□□□□ -0.13
SEC16B-204ENST00000464631 MYT1Q01538 1121 aa14.22□□□□□ -0.13
SEC16B-204ENST00000464631 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.13
SEC16B-204ENST00000464631 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.13
SEC16B-204ENST00000464631 YTHDC1Q96MU7 727 aaKnown RBP14.2□□□□□ -0.14
SEC16B-204ENST00000464631 TNIKQ9UKE5 1360 aa14.17□□□□□ -0.14
SEC16B-204ENST00000464631 NESP48681 1621 aa14.17□□□□□ -0.14
SEC16B-204ENST00000464631 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
SEC16B-204ENST00000464631 CUX1P39880 1505 aa14.13□□□□□ -0.15
SEC16B-204ENST00000464631 TOP2BQ02880 1626 aa14.12□□□□□ -0.15
SEC16B-204ENST00000464631 MIER1Q8N108 512 aa14.09□□□□□ -0.15
SEC16B-204ENST00000464631 PRDM2Q13029 1718 aa14.08□□□□□ -0.16
SEC16B-204ENST00000464631 BIVM-ERCC5R4GMW8 1640 aa14.07□□□□□ -0.16
SEC16B-204ENST00000464631 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
SEC16B-204ENST00000464631 EEA1Q15075 1411 aa14.07□□□□□ -0.16
SEC16B-204ENST00000464631 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
SEC16B-204ENST00000464631 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
SEC16B-204ENST00000464631 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
SEC16B-204ENST00000464631 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
SEC16B-204ENST00000464631 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
SEC16B-204ENST00000464631 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
SEC16B-204ENST00000464631 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
SEC16B-204ENST00000464631 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
SEC16B-204ENST00000464631 CLIP1P30622 1438 aa13.92□□□□□ -0.18
SEC16B-204ENST00000464631 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
SEC16B-204ENST00000464631 CUX2O14529 1486 aa13.92□□□□□ -0.18
SEC16B-204ENST00000464631 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
SEC16B-204ENST00000464631 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
SEC16B-204ENST00000464631 URB2Q14146 1524 aaKnown RBP13.91□□□□□ -0.18
SEC16B-204ENST00000464631 KIF21BO75037 1637 aa13.91□□□□□ -0.18
SEC16B-204ENST00000464631 KIF21AQ7Z4S6 1674 aa13.9□□□□□ -0.18
SEC16B-204ENST00000464631 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
SEC16B-204ENST00000464631 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
SEC16B-204ENST00000464631 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
SEC16B-204ENST00000464631 APLP2Q06481 763 aa13.87□□□□□ -0.19
SEC16B-204ENST00000464631 KCNA4P22459 653 aa13.85□□□□□ -0.19
SEC16B-204ENST00000464631 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms