RNA–Protein interactions for RNA: ENST00000463769.6

MKL1-207, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best)

Gene MKL1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-207ENST00000463769 NISCHQ9Y2I1 1504 aa39.03■■■■□ 3.84
MKL1-207ENST00000463769 CCDC180Q9P1Z9 1646 aa34.37■■■■□ 3.09
MKL1-207ENST00000463769 ABCC9O60706 1549 aa32.76■■■□□ 2.83
MKL1-207ENST00000463769 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
MKL1-207ENST00000463769 DCAF1Q9Y4B6 1507 aa32.42■■■□□ 2.78
MKL1-207ENST00000463769 DCAF8L2P0C7V8 631 aa32.38■■■□□ 2.77
MKL1-207ENST00000463769 MYO15BQ96JP2 1530 aa32.29■■■□□ 2.76
MKL1-207ENST00000463769 NACADO15069 1562 aa32.18■■■□□ 2.74
MKL1-207ENST00000463769 RB1CC1Q8TDY2 1594 aa32■■■□□ 2.71
MKL1-207ENST00000463769 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
MKL1-207ENST00000463769 SHROOM4Q9ULL8 1493 aa31.23■■■□□ 2.59
MKL1-207ENST00000463769 UNC13AQ9UPW8 1703 aa31.09■■■□□ 2.57
MKL1-207ENST00000463769 BICRAQ9NZM4 1560 aa30.83■■■□□ 2.53
MKL1-207ENST00000463769 PABPN1Q86U42 306 aaKnown RBP eCLIP30.78■■■□□ 2.52
MKL1-207ENST00000463769 DNAJC5BQ9UF47 199 aa30.3■■■□□ 2.44
MKL1-207ENST00000463769 BAZ1AQ9NRL2 1556 aaPredicted RBP30.25■■■□□ 2.43
MKL1-207ENST00000463769 CECR2Q9BXF3 1484 aa30.2■■■□□ 2.43
MKL1-207ENST00000463769 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
MKL1-207ENST00000463769 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
MKL1-207ENST00000463769 RSF1Q96T23 1441 aaPredicted RBP30.03■■■□□ 2.4
MKL1-207ENST00000463769 MROH2BQ7Z745 1585 aa30.01■■■□□ 2.39
MKL1-207ENST00000463769 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
MKL1-207ENST00000463769 SMARCA2P51531 1590 aa29.82■■■□□ 2.36
MKL1-207ENST00000463769 PEG3Q9GZU2 1588 aa29.82■■■□□ 2.36
MKL1-207ENST00000463769 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
MKL1-207ENST00000463769 WIZO95785 1651 aa29.72■■■□□ 2.35
MKL1-207ENST00000463769 CC2D2AQ9P2K1 1620 aa29.69■■■□□ 2.34
MKL1-207ENST00000463769 NCAPD3P42695 1498 aa29.67■■■□□ 2.34
MKL1-207ENST00000463769 BAZ1BQ9UIG0 1483 aaKnown RBP29.58■■■□□ 2.33
MKL1-207ENST00000463769 HMGXB3Q12766 1538 aa29.56■■■□□ 2.32
MKL1-207ENST00000463769 TOP2AP11388 1531 aaKnown RBP29.53■■■□□ 2.32
MKL1-207ENST00000463769 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
MKL1-207ENST00000463769 CADPSQ9ULU8 1353 aa28.87■■■□□ 2.21
MKL1-207ENST00000463769 CFTRP13569 1480 aa28.82■■■□□ 2.2
MKL1-207ENST00000463769 LAMC3Q9Y6N6 1575 aa28.76■■■□□ 2.19
MKL1-207ENST00000463769 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
MKL1-207ENST00000463769 PDS5BQ9NTI5 1447 aa28.61■■■□□ 2.17
MKL1-207ENST00000463769 NESP48681 1621 aa28.53■■■□□ 2.16
MKL1-207ENST00000463769 FANCD2Q9BXW9 1451 aa28.47■■■□□ 2.15
MKL1-207ENST00000463769 DNAJC5Q9H3Z4 198 aa28.44■■■□□ 2.14
MKL1-207ENST00000463769 CHIC1Q5VXU3 224 aa28.41■■■□□ 2.14
MKL1-207ENST00000463769 CEP164Q9UPV0 1460 aa28.39■■■□□ 2.13
MKL1-207ENST00000463769 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
MKL1-207ENST00000463769 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
MKL1-207ENST00000463769 ABCC8Q09428 1581 aa28.33■■■□□ 2.12
MKL1-207ENST00000463769 ERCC6Q03468 1493 aa28.29■■■□□ 2.12
MKL1-207ENST00000463769 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
MKL1-207ENST00000463769 TOP2BQ02880 1626 aa28.16■■■□□ 2.1
MKL1-207ENST00000463769 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
MKL1-207ENST00000463769 DNMBPQ6XZF7 1577 aa28.14■■■□□ 2.1
MKL1-207ENST00000463769 BIVM-ERCC5R4GMW8 1640 aa28.12■■■□□ 2.09
MKL1-207ENST00000463769 CUX1P39880 1505 aa28.12■■■□□ 2.09
MKL1-207ENST00000463769 SYNJ1O43426 1573 aa28.09■■■□□ 2.09
MKL1-207ENST00000463769 TOPBP1Q92547 1522 aa28.08■■■□□ 2.08
MKL1-207ENST00000463769 URB2Q14146 1524 aaKnown RBP28.05■■■□□ 2.08
MKL1-207ENST00000463769 WDR62O43379 1518 aa28■■■□□ 2.07
MKL1-207ENST00000463769 FGD5Q6ZNL6 1462 aa27.94■■■□□ 2.06
MKL1-207ENST00000463769 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
MKL1-207ENST00000463769 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.05
MKL1-207ENST00000463769 SOGA1O94964 1423 aa27.88■■■□□ 2.05
MKL1-207ENST00000463769 EEA1Q15075 1411 aa27.84■■■□□ 2.05
MKL1-207ENST00000463769 IFT140Q96RY7 1462 aa27.79■■■□□ 2.04
MKL1-207ENST00000463769 KIF27Q86VH2 1401 aa27.76■■■□□ 2.04
MKL1-207ENST00000463769 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.03
MKL1-207ENST00000463769 CUX2O14529 1486 aa27.72■■■□□ 2.03
MKL1-207ENST00000463769 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
MKL1-207ENST00000463769 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
MKL1-207ENST00000463769 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
MKL1-207ENST00000463769 CSRNP3Q8WYN3 585 aa27.64■■■□□ 2.02
MKL1-207ENST00000463769 FAM9AQ8IZU1 332 aaPredicted RBP27.59■■■□□ 2.01
MKL1-207ENST00000463769 TDRD9Q8NDG6 1382 aaKnown RBP27.55■■■□□ 2
MKL1-207ENST00000463769 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
MKL1-207ENST00000463769 RUSC2Q8N2Y8 1516 aa27.53■■■□□ 2
MKL1-207ENST00000463769 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
MKL1-207ENST00000463769 IGF1RP08069 1367 aa27.48■■□□□ 1.99
MKL1-207ENST00000463769 ERICH3Q5RHP9 1530 aa27.47■■□□□ 1.99
MKL1-207ENST00000463769 GRIN2BQ13224 1484 aa27.45■■□□□ 1.99
MKL1-207ENST00000463769 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
MKL1-207ENST00000463769 ZNF608Q9ULD9 1512 aaPredicted RBP27.43■■□□□ 1.98
MKL1-207ENST00000463769 EIF4G3O43432 1585 aaKnown RBP27.39■■□□□ 1.97
MKL1-207ENST00000463769 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
MKL1-207ENST00000463769 CUL7Q14999 1698 aa27.37■■□□□ 1.97
MKL1-207ENST00000463769 PBRM1Q86U86 1689 aa27.34■■□□□ 1.97
MKL1-207ENST00000463769 PRXQ9BXM0 1461 aa27.34■■□□□ 1.97
MKL1-207ENST00000463769 KIF21BO75037 1637 aa27.33■■□□□ 1.97
MKL1-207ENST00000463769 MAGI1Q96QZ7 1491 aaPredicted RBP27.31■■□□□ 1.96
MKL1-207ENST00000463769 RAPGEF2Q9Y4G8 1499 aa27.3■■□□□ 1.96
MKL1-207ENST00000463769 FHAD1B1AJZ9 1412 aa27.29■■□□□ 1.96
MKL1-207ENST00000463769 GOLGA3Q08378 1498 aa27.29■■□□□ 1.96
MKL1-207ENST00000463769 UBTFP17480 764 aaKnown RBP27.22■■□□□ 1.95
MKL1-207ENST00000463769 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
MKL1-207ENST00000463769 LOC105371045A0A1W2PR82 267 aa27.19■■□□□ 1.94
MKL1-207ENST00000463769 CHMP7Q8WUX9 453 aaPredicted RBP27.18■■□□□ 1.94
MKL1-207ENST00000463769 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
MKL1-207ENST00000463769 SYNJ2O15056 1496 aa27.17■■□□□ 1.94
MKL1-207ENST00000463769 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
MKL1-207ENST00000463769 FBLN2P98095 1184 aa27.08■■□□□ 1.93
MKL1-207ENST00000463769 EHMT2Q96KQ7 1210 aa27.08■■□□□ 1.93
MKL1-207ENST00000463769 GRIN2AQ12879 1464 aa27.05■■□□□ 1.92
MKL1-207ENST00000463769 CTTNBP2Q8WZ74 1663 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms