RNA–Protein interactions for RNA: ENST00000463732.5

HDAC7-218, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-218ENST00000463732 NISCHQ9Y2I1 1504 aa39.26■■■■□ 3.88
HDAC7-218ENST00000463732 CCDC180Q9P1Z9 1646 aa35.1■■■■□ 3.21
HDAC7-218ENST00000463732 ABCC9O60706 1549 aa34.25■■■■□ 3.07
HDAC7-218ENST00000463732 RB1CC1Q8TDY2 1594 aa33.04■■■□□ 2.88
HDAC7-218ENST00000463732 NACADO15069 1562 aa32.98■■■□□ 2.87
HDAC7-218ENST00000463732 MYO15BQ96JP2 1530 aa32.8■■■□□ 2.84
HDAC7-218ENST00000463732 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
HDAC7-218ENST00000463732 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
HDAC7-218ENST00000463732 DCAF1Q9Y4B6 1507 aa32.59■■■□□ 2.81
HDAC7-218ENST00000463732 UNC13AQ9UPW8 1703 aa32.24■■■□□ 2.75
HDAC7-218ENST00000463732 BICRAQ9NZM4 1560 aa31.97■■■□□ 2.71
HDAC7-218ENST00000463732 PABPN1Q86U42 306 aaKnown RBP eCLIP31.89■■■□□ 2.7
HDAC7-218ENST00000463732 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
HDAC7-218ENST00000463732 SHROOM4Q9ULL8 1493 aa31.81■■■□□ 2.68
HDAC7-218ENST00000463732 DNAJC5BQ9UF47 199 aa31.43■■■□□ 2.62
HDAC7-218ENST00000463732 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
HDAC7-218ENST00000463732 CC2D2AQ9P2K1 1620 aa31.04■■■□□ 2.56
HDAC7-218ENST00000463732 CECR2Q9BXF3 1484 aa30.83■■■□□ 2.53
HDAC7-218ENST00000463732 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
HDAC7-218ENST00000463732 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
HDAC7-218ENST00000463732 NCAPD3P42695 1498 aa30.38■■■□□ 2.45
HDAC7-218ENST00000463732 SMARCA2P51531 1590 aa30.38■■■□□ 2.45
HDAC7-218ENST00000463732 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
HDAC7-218ENST00000463732 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
HDAC7-218ENST00000463732 HMGXB3Q12766 1538 aa30.28■■■□□ 2.44
HDAC7-218ENST00000463732 MROH2BQ7Z745 1585 aa30.2■■■□□ 2.43
HDAC7-218ENST00000463732 BAZ1BQ9UIG0 1483 aaKnown RBP30.12■■■□□ 2.41
HDAC7-218ENST00000463732 WIZO95785 1651 aa29.88■■■□□ 2.37
HDAC7-218ENST00000463732 RSF1Q96T23 1441 aaPredicted RBP29.81■■■□□ 2.36
HDAC7-218ENST00000463732 LAMC3Q9Y6N6 1575 aa29.65■■■□□ 2.34
HDAC7-218ENST00000463732 TOP2AP11388 1531 aaKnown RBP29.63■■■□□ 2.33
HDAC7-218ENST00000463732 ERCC6Q03468 1493 aa29.59■■■□□ 2.33
HDAC7-218ENST00000463732 NESP48681 1621 aa29.58■■■□□ 2.33
HDAC7-218ENST00000463732 CADPSQ9ULU8 1353 aa29.45■■■□□ 2.31
HDAC7-218ENST00000463732 PDS5BQ9NTI5 1447 aa29.41■■■□□ 2.3
HDAC7-218ENST00000463732 CUX2O14529 1486 aa29.4■■■□□ 2.3
HDAC7-218ENST00000463732 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
HDAC7-218ENST00000463732 THOC2Q8NI27 1593 aaKnown RBP29.28■■■□□ 2.28
HDAC7-218ENST00000463732 CFTRP13569 1480 aa29.28■■■□□ 2.28
HDAC7-218ENST00000463732 CCDC88BA6NC98 1476 aa29.2■■■□□ 2.26
HDAC7-218ENST00000463732 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
HDAC7-218ENST00000463732 CEP164Q9UPV0 1460 aa29.13■■■□□ 2.25
HDAC7-218ENST00000463732 FANCD2Q9BXW9 1451 aa29.12■■■□□ 2.25
HDAC7-218ENST00000463732 MRC2Q9UBG0 1479 aa29.11■■■□□ 2.25
HDAC7-218ENST00000463732 WDR62O43379 1518 aa29.04■■■□□ 2.24
HDAC7-218ENST00000463732 SUPT5HO00267 1087 aaKnown RBP28.84■■■□□ 2.21
HDAC7-218ENST00000463732 URB2Q14146 1524 aaKnown RBP28.82■■■□□ 2.2
HDAC7-218ENST00000463732 ABCC8Q09428 1581 aa28.73■■■□□ 2.19
HDAC7-218ENST00000463732 DNMBPQ6XZF7 1577 aa28.65■■■□□ 2.18
HDAC7-218ENST00000463732 TOPBP1Q92547 1522 aa28.64■■■□□ 2.18
HDAC7-218ENST00000463732 IFT140Q96RY7 1462 aa28.53■■■□□ 2.16
HDAC7-218ENST00000463732 DNAJC5Q9H3Z4 198 aa28.52■■■□□ 2.16
HDAC7-218ENST00000463732 POLA1P09884 1462 aaPredicted RBP28.39■■■□□ 2.13
HDAC7-218ENST00000463732 TARBP1Q13395 1621 aaKnown RBP28.36■■■□□ 2.13
HDAC7-218ENST00000463732 CUX1P39880 1505 aa28.36■■■□□ 2.13
HDAC7-218ENST00000463732 ZNF608Q9ULD9 1512 aaPredicted RBP28.31■■■□□ 2.12
HDAC7-218ENST00000463732 FGD5Q6ZNL6 1462 aa28.3■■■□□ 2.12
HDAC7-218ENST00000463732 EIF4G3O43432 1585 aaKnown RBP28.29■■■□□ 2.12
HDAC7-218ENST00000463732 WDR97A6NE52 1622 aa28.27■■■□□ 2.12
HDAC7-218ENST00000463732 SOGA1O94964 1423 aa28.25■■■□□ 2.11
HDAC7-218ENST00000463732 RAD54L2Q9Y4B4 1467 aa28.19■■■□□ 2.1
HDAC7-218ENST00000463732 BIVM-ERCC5R4GMW8 1640 aa28.17■■■□□ 2.1
HDAC7-218ENST00000463732 WRNQ14191 1432 aaPredicted RBP eCLIP28.16■■■□□ 2.1
HDAC7-218ENST00000463732 TOP2BQ02880 1626 aa28.15■■■□□ 2.1
HDAC7-218ENST00000463732 AQRO60306 1485 aaKnown RBP eCLIP28.13■■■□□ 2.091e-6■■■■■ 30.7
HDAC7-218ENST00000463732 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
HDAC7-218ENST00000463732 ABCA10Q8WWZ4 1543 aa28.06■■■□□ 2.08
HDAC7-218ENST00000463732 OSCARQ8IYS5 282 aa28.05■■■□□ 2.08
HDAC7-218ENST00000463732 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
HDAC7-218ENST00000463732 GRIN2BQ13224 1484 aa27.98■■■□□ 2.07
HDAC7-218ENST00000463732 ABCA5Q8WWZ7 1642 aa27.97■■■□□ 2.07
HDAC7-218ENST00000463732 MAGI1Q96QZ7 1491 aaPredicted RBP27.96■■■□□ 2.07
HDAC7-218ENST00000463732 CHD1O14646 1710 aa27.95■■■□□ 2.07
HDAC7-218ENST00000463732 PBRM1Q86U86 1689 aa27.95■■■□□ 2.07
HDAC7-218ENST00000463732 GAPVD1Q14C86 1478 aa27.95■■■□□ 2.06
HDAC7-218ENST00000463732 SNAPC4Q5SXM2 1469 aa27.92■■■□□ 2.06
HDAC7-218ENST00000463732 SYNJ2O15056 1496 aa27.83■■■□□ 2.05
HDAC7-218ENST00000463732 FBLN2P98095 1184 aa27.77■■■□□ 2.04
HDAC7-218ENST00000463732 ERICH3Q5RHP9 1530 aa27.76■■■□□ 2.03
HDAC7-218ENST00000463732 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
HDAC7-218ENST00000463732 ADAMTS12P58397 1594 aa27.71■■■□□ 2.03
HDAC7-218ENST00000463732 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
HDAC7-218ENST00000463732 RIMBP3CA6NJZ7 1639 aa27.66■■■□□ 2.02
HDAC7-218ENST00000463732 RIMBP3BA6NNM3 1639 aa27.66■■■□□ 2.02
HDAC7-218ENST00000463732 RIMBP3Q9UFD9 1639 aa27.66■■■□□ 2.02
HDAC7-218ENST00000463732 ARHGEF11O15085 1522 aa27.64■■■□□ 2.02
HDAC7-218ENST00000463732 FHAD1B1AJZ9 1412 aa27.64■■■□□ 2.02
HDAC7-218ENST00000463732 GRIN2AQ12879 1464 aa27.62■■■□□ 2.01
HDAC7-218ENST00000463732 KIF27Q86VH2 1401 aa27.59■■■□□ 2.01
HDAC7-218ENST00000463732 CUL7Q14999 1698 aa27.51■■□□□ 1.99
HDAC7-218ENST00000463732 NUP160Q12769 1436 aa27.5■■□□□ 1.99
HDAC7-218ENST00000463732 CEP170Q5SW79 1584 aa27.47■■□□□ 1.99
HDAC7-218ENST00000463732 TRIM41Q8WV44 630 aa27.44■■□□□ 1.98
HDAC7-218ENST00000463732 IGF1RP08069 1367 aa27.42■■□□□ 1.98
HDAC7-218ENST00000463732 ARAP1Q96P48 1450 aa27.38■■□□□ 1.97
HDAC7-218ENST00000463732 SHROOM2Q13796 1616 aa27.36■■□□□ 1.97
HDAC7-218ENST00000463732 RUSC2Q8N2Y8 1516 aa27.31■■□□□ 1.96
HDAC7-218ENST00000463732 CARMIL1Q5VZK9 1371 aa27.28■■□□□ 1.96
HDAC7-218ENST00000463732 CYB5RLQ6IPT4 315 aa27.27■■□□□ 1.96
HDAC7-218ENST00000463732 KIAA0586Q9BVV6 1533 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms