RNA–Protein interactions for RNA: ENST00000463285.5

CTPS1-203, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 739 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-203ENST00000463285 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
CTPS1-203ENST00000463285 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
CTPS1-203ENST00000463285 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
CTPS1-203ENST00000463285 ABCC9O60706 1549 aa20.42■□□□□ 0.86
CTPS1-203ENST00000463285 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
CTPS1-203ENST00000463285 SENP3Q9H4L4 574 aaPredicted RBP19.42■□□□□ 0.7
CTPS1-203ENST00000463285 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
CTPS1-203ENST00000463285 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
CTPS1-203ENST00000463285 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
CTPS1-203ENST00000463285 NACADO15069 1562 aa19.07■□□□□ 0.64
CTPS1-203ENST00000463285 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
CTPS1-203ENST00000463285 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
CTPS1-203ENST00000463285 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.6
CTPS1-203ENST00000463285 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
CTPS1-203ENST00000463285 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
CTPS1-203ENST00000463285 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
CTPS1-203ENST00000463285 SHROOM4Q9ULL8 1493 aa18.41■□□□□ 0.54
CTPS1-203ENST00000463285 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
CTPS1-203ENST00000463285 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
CTPS1-203ENST00000463285 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
CTPS1-203ENST00000463285 DCAF1Q9Y4B6 1507 aa18.36■□□□□ 0.53
CTPS1-203ENST00000463285 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
CTPS1-203ENST00000463285 FOXD1Q16676 465 aa18.13■□□□□ 0.49
CTPS1-203ENST00000463285 DNAJC5Q9H3Z4 198 aa17.95■□□□□ 0.46
CTPS1-203ENST00000463285 CUX2O14529 1486 aa17.66■□□□□ 0.42
CTPS1-203ENST00000463285 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
CTPS1-203ENST00000463285 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
CTPS1-203ENST00000463285 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
CTPS1-203ENST00000463285 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
CTPS1-203ENST00000463285 NESP48681 1621 aa17.46■□□□□ 0.39
CTPS1-203ENST00000463285 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
CTPS1-203ENST00000463285 HMGXB3Q12766 1538 aa17.46■□□□□ 0.39
CTPS1-203ENST00000463285 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
CTPS1-203ENST00000463285 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
CTPS1-203ENST00000463285 THOC2Q8NI27 1593 aaKnown RBP17.31■□□□□ 0.36
CTPS1-203ENST00000463285 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
CTPS1-203ENST00000463285 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
CTPS1-203ENST00000463285 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
CTPS1-203ENST00000463285 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
CTPS1-203ENST00000463285 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
CTPS1-203ENST00000463285 PDS5BQ9NTI5 1447 aa17.18■□□□□ 0.34
CTPS1-203ENST00000463285 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
CTPS1-203ENST00000463285 CADPSQ9ULU8 1353 aa17.08■□□□□ 0.32
CTPS1-203ENST00000463285 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
CTPS1-203ENST00000463285 WDR62O43379 1518 aa17.01■□□□□ 0.31
CTPS1-203ENST00000463285 WIZO95785 1651 aa16.98■□□□□ 0.31
CTPS1-203ENST00000463285 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
CTPS1-203ENST00000463285 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
CTPS1-203ENST00000463285 MSH5O43196 834 aa16.93■□□□□ 0.3
CTPS1-203ENST00000463285 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
CTPS1-203ENST00000463285 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
CTPS1-203ENST00000463285 ADRA2BP18089 450 aa16.89■□□□□ 0.29
CTPS1-203ENST00000463285 OSCARQ8IYS5 282 aa16.83■□□□□ 0.28
CTPS1-203ENST00000463285 CFTRP13569 1480 aa16.81■□□□□ 0.28
CTPS1-203ENST00000463285 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
CTPS1-203ENST00000463285 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
CTPS1-203ENST00000463285 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
CTPS1-203ENST00000463285 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
CTPS1-203ENST00000463285 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
CTPS1-203ENST00000463285 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
CTPS1-203ENST00000463285 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
CTPS1-203ENST00000463285 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
CTPS1-203ENST00000463285 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
CTPS1-203ENST00000463285 ARHGEF11O15085 1522 aa16.56■□□□□ 0.24
CTPS1-203ENST00000463285 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
CTPS1-203ENST00000463285 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
CTPS1-203ENST00000463285 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
CTPS1-203ENST00000463285 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
CTPS1-203ENST00000463285 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
CTPS1-203ENST00000463285 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
CTPS1-203ENST00000463285 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
CTPS1-203ENST00000463285 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.223e-9■■■■□ 25.9
CTPS1-203ENST00000463285 CHD1O14646 1710 aa16.43■□□□□ 0.22
CTPS1-203ENST00000463285 FBLN2P98095 1184 aa16.43■□□□□ 0.22
CTPS1-203ENST00000463285 TRHP20396 242 aaPredicted RBP16.41■□□□□ 0.22
CTPS1-203ENST00000463285 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
CTPS1-203ENST00000463285 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
CTPS1-203ENST00000463285 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
CTPS1-203ENST00000463285 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
CTPS1-203ENST00000463285 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
CTPS1-203ENST00000463285 SOGA1O94964 1423 aa16.28■□□□□ 0.2
CTPS1-203ENST00000463285 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
CTPS1-203ENST00000463285 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
CTPS1-203ENST00000463285 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
CTPS1-203ENST00000463285 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
CTPS1-203ENST00000463285 SYNJ1O43426 1573 aa16.21■□□□□ 0.18
CTPS1-203ENST00000463285 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
CTPS1-203ENST00000463285 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
CTPS1-203ENST00000463285 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
CTPS1-203ENST00000463285 CUX1P39880 1505 aa16.16■□□□□ 0.18
CTPS1-203ENST00000463285 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
CTPS1-203ENST00000463285 PBRM1Q86U86 1689 aa16.09■□□□□ 0.17
CTPS1-203ENST00000463285 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
CTPS1-203ENST00000463285 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
CTPS1-203ENST00000463285 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
CTPS1-203ENST00000463285 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
CTPS1-203ENST00000463285 GRIN2AQ12879 1464 aa15.96■□□□□ 0.14
CTPS1-203ENST00000463285 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
CTPS1-203ENST00000463285 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
CTPS1-203ENST00000463285 NUP160Q12769 1436 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms