RNA–Protein interactions for RNA: ENST00000462806.5

TUBA4A-208, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-208ENST00000462806 NISCHQ9Y2I1 1504 aa31.74■■■□□ 2.67
TUBA4A-208ENST00000462806 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
TUBA4A-208ENST00000462806 ABCC9O60706 1549 aa27.71■■■□□ 2.03
TUBA4A-208ENST00000462806 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
TUBA4A-208ENST00000462806 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
TUBA4A-208ENST00000462806 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.82
TUBA4A-208ENST00000462806 NACADO15069 1562 aa26.42■■□□□ 1.82
TUBA4A-208ENST00000462806 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
TUBA4A-208ENST00000462806 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
TUBA4A-208ENST00000462806 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
TUBA4A-208ENST00000462806 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
TUBA4A-208ENST00000462806 SCRIBQ14160 1630 aa25.72■■□□□ 1.71
TUBA4A-208ENST00000462806 UNC13AQ9UPW8 1703 aa25.7■■□□□ 1.7
TUBA4A-208ENST00000462806 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
TUBA4A-208ENST00000462806 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
TUBA4A-208ENST00000462806 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
TUBA4A-208ENST00000462806 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
TUBA4A-208ENST00000462806 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.58
TUBA4A-208ENST00000462806 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
TUBA4A-208ENST00000462806 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
TUBA4A-208ENST00000462806 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
TUBA4A-208ENST00000462806 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
TUBA4A-208ENST00000462806 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
TUBA4A-208ENST00000462806 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
TUBA4A-208ENST00000462806 DNAJC5Q9H3Z4 198 aa24.4■■□□□ 1.5
TUBA4A-208ENST00000462806 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
TUBA4A-208ENST00000462806 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
TUBA4A-208ENST00000462806 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
TUBA4A-208ENST00000462806 HMGXB3Q12766 1538 aa24.2■■□□□ 1.46
TUBA4A-208ENST00000462806 WIZO95785 1651 aa24.16■■□□□ 1.46
TUBA4A-208ENST00000462806 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
TUBA4A-208ENST00000462806 CUX2O14529 1486 aa23.93■■□□□ 1.42
TUBA4A-208ENST00000462806 NESP48681 1621 aa23.9■■□□□ 1.42
TUBA4A-208ENST00000462806 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
TUBA4A-208ENST00000462806 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
TUBA4A-208ENST00000462806 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
TUBA4A-208ENST00000462806 CCDC88BA6NC98 1476 aa23.76■■□□□ 1.39
TUBA4A-208ENST00000462806 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
TUBA4A-208ENST00000462806 LAMC3Q9Y6N6 1575 aa23.7■■□□□ 1.38
TUBA4A-208ENST00000462806 CFTRP13569 1480 aa23.62■■□□□ 1.37
TUBA4A-208ENST00000462806 FANCD2Q9BXW9 1451 aa23.54■■□□□ 1.36
TUBA4A-208ENST00000462806 THOC2Q8NI27 1593 aaKnown RBP23.52■■□□□ 1.36
TUBA4A-208ENST00000462806 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
TUBA4A-208ENST00000462806 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
TUBA4A-208ENST00000462806 MRC2Q9UBG0 1479 aa23.4■■□□□ 1.34
TUBA4A-208ENST00000462806 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
TUBA4A-208ENST00000462806 WDR62O43379 1518 aa23.2■■□□□ 1.3
TUBA4A-208ENST00000462806 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
TUBA4A-208ENST00000462806 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
TUBA4A-208ENST00000462806 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
TUBA4A-208ENST00000462806 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
TUBA4A-208ENST00000462806 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
TUBA4A-208ENST00000462806 SOGA1O94964 1423 aa23■■□□□ 1.27
TUBA4A-208ENST00000462806 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
TUBA4A-208ENST00000462806 WRNQ14191 1432 aaPredicted RBP eCLIP22.94■■□□□ 1.26
TUBA4A-208ENST00000462806 CUX1P39880 1505 aa22.93■■□□□ 1.26
TUBA4A-208ENST00000462806 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
TUBA4A-208ENST00000462806 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
TUBA4A-208ENST00000462806 TDRD9Q8NDG6 1382 aaKnown RBP22.9■■□□□ 1.26
TUBA4A-208ENST00000462806 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
TUBA4A-208ENST00000462806 ZNF608Q9ULD9 1512 aaPredicted RBP22.88■■□□□ 1.25
TUBA4A-208ENST00000462806 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
TUBA4A-208ENST00000462806 FBLN2P98095 1184 aa22.84■■□□□ 1.25
TUBA4A-208ENST00000462806 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
TUBA4A-208ENST00000462806 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
TUBA4A-208ENST00000462806 CHMP7Q8WUX9 453 aaPredicted RBP22.71■■□□□ 1.23
TUBA4A-208ENST00000462806 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
TUBA4A-208ENST00000462806 TOP2BQ02880 1626 aa22.69■■□□□ 1.22
TUBA4A-208ENST00000462806 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
TUBA4A-208ENST00000462806 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
TUBA4A-208ENST00000462806 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
TUBA4A-208ENST00000462806 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
TUBA4A-208ENST00000462806 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
TUBA4A-208ENST00000462806 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
TUBA4A-208ENST00000462806 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
TUBA4A-208ENST00000462806 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
TUBA4A-208ENST00000462806 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
TUBA4A-208ENST00000462806 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
TUBA4A-208ENST00000462806 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
TUBA4A-208ENST00000462806 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
TUBA4A-208ENST00000462806 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
TUBA4A-208ENST00000462806 SYNJ2O15056 1496 aa22.42■■□□□ 1.18
TUBA4A-208ENST00000462806 IGF1RP08069 1367 aa22.42■■□□□ 1.18
TUBA4A-208ENST00000462806 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
TUBA4A-208ENST00000462806 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.18
TUBA4A-208ENST00000462806 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
TUBA4A-208ENST00000462806 CYB5RLQ6IPT4 315 aa22.35■■□□□ 1.17
TUBA4A-208ENST00000462806 FAM9AQ8IZU1 332 aaPredicted RBP22.35■■□□□ 1.17
TUBA4A-208ENST00000462806 ERICH3Q5RHP9 1530 aa22.34■■□□□ 1.17
TUBA4A-208ENST00000462806 CHD1O14646 1710 aa22.34■■□□□ 1.17
TUBA4A-208ENST00000462806 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
TUBA4A-208ENST00000462806 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
TUBA4A-208ENST00000462806 RUSC2Q8N2Y8 1516 aa22.29■■□□□ 1.16
TUBA4A-208ENST00000462806 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
TUBA4A-208ENST00000462806 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
TUBA4A-208ENST00000462806 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
TUBA4A-208ENST00000462806 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
TUBA4A-208ENST00000462806 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
TUBA4A-208ENST00000462806 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
TUBA4A-208ENST00000462806 EHMT2Q96KQ7 1210 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms