RNA–Protein interactions for RNA: ENST00000462720.6

PRKCE-204, Transcript of protein kinase C epsilon, humanhuman

TSL 5

Gene PRKCE, Length 305 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCE-204ENST00000462720 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
PRKCE-204ENST00000462720 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
PRKCE-204ENST00000462720 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
PRKCE-204ENST00000462720 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
PRKCE-204ENST00000462720 FOXD1Q16676 465 aa13.77□□□□□ -0.21
PRKCE-204ENST00000462720 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
PRKCE-204ENST00000462720 ABCC9O60706 1549 aa12.97□□□□□ -0.33
PRKCE-204ENST00000462720 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.33
PRKCE-204ENST00000462720 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
PRKCE-204ENST00000462720 MSH5O43196 834 aa12.82□□□□□ -0.36
PRKCE-204ENST00000462720 ADRA2BP18089 450 aa12.79□□□□□ -0.36
PRKCE-204ENST00000462720 PIAS4Q8N2W9 510 aaPredicted RBP12.77□□□□□ -0.37
PRKCE-204ENST00000462720 DNAJC5BQ9UF47 199 aa12.72□□□□□ -0.37
PRKCE-204ENST00000462720 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
PRKCE-204ENST00000462720 CCDC180Q9P1Z9 1646 aa12.31□□□□□ -0.44
PRKCE-204ENST00000462720 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRKCE-204ENST00000462720 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
PRKCE-204ENST00000462720 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
PRKCE-204ENST00000462720 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
PRKCE-204ENST00000462720 NACADO15069 1562 aa11.84□□□□□ -0.51
PRKCE-204ENST00000462720 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
PRKCE-204ENST00000462720 BICRAQ9NZM4 1560 aa11.75□□□□□ -0.53
PRKCE-204ENST00000462720 CECR2Q9BXF3 1484 aa11.7□□□□□ -0.54
PRKCE-204ENST00000462720 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
PRKCE-204ENST00000462720 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
PRKCE-204ENST00000462720 CC2D2AQ9P2K1 1620 aa11.62□□□□□ -0.55
PRKCE-204ENST00000462720 SCAF1Q9H7N4 1312 aaKnown RBP11.56□□□□□ -0.56
PRKCE-204ENST00000462720 MYO15BQ96JP2 1530 aa11.5□□□□□ -0.57
PRKCE-204ENST00000462720 EIF4G1Q04637 1599 aaKnown RBP11.48□□□□□ -0.57
PRKCE-204ENST00000462720 SHROOM4Q9ULL8 1493 aa11.44□□□□□ -0.58
PRKCE-204ENST00000462720 PPP4R3CPQ6ZMV5 832 aa11.38□□□□□ -0.59
PRKCE-204ENST00000462720 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
PRKCE-204ENST00000462720 CUX2O14529 1486 aa11.28□□□□□ -0.6
PRKCE-204ENST00000462720 HOXD11P31277 338 aaPredicted RBP11.24□□□□□ -0.61
PRKCE-204ENST00000462720 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
PRKCE-204ENST00000462720 ZCCHC6Q5VYS8 1495 aaKnown RBP11.21□□□□□ -0.61
PRKCE-204ENST00000462720 DCAF1Q9Y4B6 1507 aa11.2□□□□□ -0.62
PRKCE-204ENST00000462720 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
PRKCE-204ENST00000462720 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
PRKCE-204ENST00000462720 DCAF8L1A6NGE4 600 aa11.09□□□□□ -0.63
PRKCE-204ENST00000462720 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
PRKCE-204ENST00000462720 CACNB1Q02641 598 aaPredicted RBP11.04□□□□□ -0.64
PRKCE-204ENST00000462720 NESP48681 1621 aa11.02□□□□□ -0.64
PRKCE-204ENST00000462720 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
PRKCE-204ENST00000462720 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
PRKCE-204ENST00000462720 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
PRKCE-204ENST00000462720 THOC2Q8NI27 1593 aaKnown RBP10.89□□□□□ -0.67
PRKCE-204ENST00000462720 NCBP3Q53F19 620 aaKnown RBP10.84□□□□□ -0.67
PRKCE-204ENST00000462720 SMARCA2P51531 1590 aa10.83□□□□□ -0.68
PRKCE-204ENST00000462720 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
PRKCE-204ENST00000462720 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
PRKCE-204ENST00000462720 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
PRKCE-204ENST00000462720 C1QBPQ07021 282 aaKnown RBP10.79□□□□□ -0.68
PRKCE-204ENST00000462720 PDS5BQ9NTI5 1447 aa10.76□□□□□ -0.69
PRKCE-204ENST00000462720 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
PRKCE-204ENST00000462720 LAMC3Q9Y6N6 1575 aa10.74□□□□□ -0.69
PRKCE-204ENST00000462720 KIF21AQ7Z4S6 1674 aa10.73□□□□□ -0.69
PRKCE-204ENST00000462720 SMARCA4P51532 1647 aa10.71□□□□□ -0.69
PRKCE-204ENST00000462720 BAZ1AQ9NRL2 1556 aaPredicted RBP10.69□□□□□ -0.7
PRKCE-204ENST00000462720 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
PRKCE-204ENST00000462720 CADPSQ9ULU8 1353 aa10.67□□□□□ -0.7
PRKCE-204ENST00000462720 WDR62O43379 1518 aa10.65□□□□□ -0.7
PRKCE-204ENST00000462720 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
PRKCE-204ENST00000462720 CYB5RLQ6IPT4 315 aa10.62□□□□□ -0.71
PRKCE-204ENST00000462720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.61□□□□□ -0.71
PRKCE-204ENST00000462720 RIMBP3CA6NJZ7 1639 aa10.61□□□□□ -0.71
PRKCE-204ENST00000462720 RIMBP3BA6NNM3 1639 aa10.61□□□□□ -0.71
PRKCE-204ENST00000462720 RIMBP3Q9UFD9 1639 aa10.61□□□□□ -0.71
PRKCE-204ENST00000462720 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
PRKCE-204ENST00000462720 MROH2BQ7Z745 1585 aa10.56□□□□□ -0.72
PRKCE-204ENST00000462720 ARHGEF11O15085 1522 aa10.56□□□□□ -0.72
PRKCE-204ENST00000462720 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
PRKCE-204ENST00000462720 KCNA4P22459 653 aa10.54□□□□□ -0.72
PRKCE-204ENST00000462720 FANCD2Q9BXW9 1451 aa10.53□□□□□ -0.72
PRKCE-204ENST00000462720 URB2Q14146 1524 aaKnown RBP10.48□□□□□ -0.73
PRKCE-204ENST00000462720 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
PRKCE-204ENST00000462720 ZNF608Q9ULD9 1512 aaPredicted RBP10.46□□□□□ -0.74
PRKCE-204ENST00000462720 ARAP1Q96P48 1450 aa10.45□□□□□ -0.74
PRKCE-204ENST00000462720 CFTRP13569 1480 aa10.42□□□□□ -0.74
PRKCE-204ENST00000462720 SLC4A2P04920 1241 aa10.38□□□□□ -0.75
PRKCE-204ENST00000462720 FBLN2P98095 1184 aa10.37□□□□□ -0.75
PRKCE-204ENST00000462720 WIZO95785 1651 aa10.37□□□□□ -0.75
PRKCE-204ENST00000462720 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
PRKCE-204ENST00000462720 SPINK5Q9NQ38 1064 aaPredicted RBP10.35□□□□□ -0.75
PRKCE-204ENST00000462720 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.76
PRKCE-204ENST00000462720 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
PRKCE-204ENST00000462720 ILDR1Q86SU0 546 aaPredicted RBP10.3□□□□□ -0.76
PRKCE-204ENST00000462720 DSG3P32926 999 aa10.28□□□□□ -0.76
PRKCE-204ENST00000462720 TOPBP1Q92547 1522 aa10.27□□□□□ -0.77
PRKCE-204ENST00000462720 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
PRKCE-204ENST00000462720 CAPN15O75808 1086 aa10.24□□□□□ -0.77
PRKCE-204ENST00000462720 CHD1O14646 1710 aa10.24□□□□□ -0.77
PRKCE-204ENST00000462720 TDRD9Q8NDG6 1382 aaKnown RBP10.21□□□□□ -0.78
PRKCE-204ENST00000462720 CHMP7Q8WUX9 453 aaPredicted RBP10.19□□□□□ -0.78
PRKCE-204ENST00000462720 TARBP1Q13395 1621 aaKnown RBP10.18□□□□□ -0.78
PRKCE-204ENST00000462720 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
PRKCE-204ENST00000462720 CLASP1Q7Z460 1538 aa10.17□□□□□ -0.78
PRKCE-204ENST00000462720 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
PRKCE-204ENST00000462720 CCDC88BA6NC98 1476 aa10.16□□□□□ -0.78
PRKCE-204ENST00000462720 ABCC8Q09428 1581 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms