RNA–Protein interactions for RNA: ENST00000462636.5

CLDN12-207, Transcript of claudin 12, humanhuman

TSL 4

Gene CLDN12, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-207ENST00000462636 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
CLDN12-207ENST00000462636 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
CLDN12-207ENST00000462636 ABCC9O60706 1549 aa17.41■□□□□ 0.38
CLDN12-207ENST00000462636 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
CLDN12-207ENST00000462636 CCDC180Q9P1Z9 1646 aa16.9■□□□□ 0.3
CLDN12-207ENST00000462636 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
CLDN12-207ENST00000462636 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
CLDN12-207ENST00000462636 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
CLDN12-207ENST00000462636 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLDN12-207ENST00000462636 NACADO15069 1562 aa16.18■□□□□ 0.18
CLDN12-207ENST00000462636 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
CLDN12-207ENST00000462636 BICRAQ9NZM4 1560 aa15.83■□□□□ 0.12
CLDN12-207ENST00000462636 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
CLDN12-207ENST00000462636 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
CLDN12-207ENST00000462636 DNAJC5Q9H3Z4 198 aa15.67■□□□□ 0.1
CLDN12-207ENST00000462636 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
CLDN12-207ENST00000462636 CC2D2AQ9P2K1 1620 aa15.64■□□□□ 0.09
CLDN12-207ENST00000462636 EIF4G1Q04637 1599 aaKnown RBP15.52■□□□□ 0.07
CLDN12-207ENST00000462636 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
CLDN12-207ENST00000462636 DCAF1Q9Y4B6 1507 aa15.49■□□□□ 0.07
CLDN12-207ENST00000462636 ZCCHC6Q5VYS8 1495 aaKnown RBP15.47■□□□□ 0.07
CLDN12-207ENST00000462636 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
CLDN12-207ENST00000462636 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
CLDN12-207ENST00000462636 CUX2O14529 1486 aa15.14■□□□□ 0.01
CLDN12-207ENST00000462636 ERCC6Q03468 1493 aa15.09■□□□□ 0.01
CLDN12-207ENST00000462636 NCAPD3P42695 1498 aa15□□□□□ -0.01
CLDN12-207ENST00000462636 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
CLDN12-207ENST00000462636 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
CLDN12-207ENST00000462636 NESP48681 1621 aa14.81□□□□□ -0.04
CLDN12-207ENST00000462636 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
CLDN12-207ENST00000462636 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
CLDN12-207ENST00000462636 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
CLDN12-207ENST00000462636 PDS5BQ9NTI5 1447 aa14.69□□□□□ -0.06
CLDN12-207ENST00000462636 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
CLDN12-207ENST00000462636 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
CLDN12-207ENST00000462636 THOC2Q8NI27 1593 aaKnown RBP14.63□□□□□ -0.07
CLDN12-207ENST00000462636 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
CLDN12-207ENST00000462636 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
CLDN12-207ENST00000462636 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
CLDN12-207ENST00000462636 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
CLDN12-207ENST00000462636 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
CLDN12-207ENST00000462636 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
CLDN12-207ENST00000462636 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.09
CLDN12-207ENST00000462636 FOXD1Q16676 465 aa14.45□□□□□ -0.1
CLDN12-207ENST00000462636 WDR62O43379 1518 aa14.42□□□□□ -0.1
CLDN12-207ENST00000462636 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
CLDN12-207ENST00000462636 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
CLDN12-207ENST00000462636 CFTRP13569 1480 aa14.26□□□□□ -0.13
CLDN12-207ENST00000462636 CYB5RLQ6IPT4 315 aa14.24□□□□□ -0.13
CLDN12-207ENST00000462636 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
CLDN12-207ENST00000462636 WIZO95785 1651 aa14.22□□□□□ -0.13
CLDN12-207ENST00000462636 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
CLDN12-207ENST00000462636 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
CLDN12-207ENST00000462636 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
CLDN12-207ENST00000462636 RIMBP3CA6NJZ7 1639 aa14.16□□□□□ -0.14
CLDN12-207ENST00000462636 RIMBP3BA6NNM3 1639 aa14.16□□□□□ -0.14
CLDN12-207ENST00000462636 RIMBP3Q9UFD9 1639 aa14.16□□□□□ -0.14
CLDN12-207ENST00000462636 ARHGEF11O15085 1522 aa14.14□□□□□ -0.15
CLDN12-207ENST00000462636 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
CLDN12-207ENST00000462636 FBLN2P98095 1184 aa14.1□□□□□ -0.15
CLDN12-207ENST00000462636 ZNF608Q9ULD9 1512 aaPredicted RBP14.1□□□□□ -0.15
CLDN12-207ENST00000462636 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
CLDN12-207ENST00000462636 ABCC8Q09428 1581 aa14.03□□□□□ -0.16
CLDN12-207ENST00000462636 TOPBP1Q92547 1522 aa14□□□□□ -0.17
CLDN12-207ENST00000462636 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLDN12-207ENST00000462636 CCDC88BA6NC98 1476 aa13.96□□□□□ -0.17
CLDN12-207ENST00000462636 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
CLDN12-207ENST00000462636 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
CLDN12-207ENST00000462636 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
CLDN12-207ENST00000462636 TDRD9Q8NDG6 1382 aaKnown RBP13.88□□□□□ -0.19
CLDN12-207ENST00000462636 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
CLDN12-207ENST00000462636 PRDM2Q13029 1718 aa13.87□□□□□ -0.19
CLDN12-207ENST00000462636 SOGA1O94964 1423 aa13.86□□□□□ -0.19
CLDN12-207ENST00000462636 CHD1O14646 1710 aa13.84□□□□□ -0.19
CLDN12-207ENST00000462636 TARBP1Q13395 1621 aaKnown RBP13.83□□□□□ -0.2
CLDN12-207ENST00000462636 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
CLDN12-207ENST00000462636 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
CLDN12-207ENST00000462636 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
CLDN12-207ENST00000462636 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
CLDN12-207ENST00000462636 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
CLDN12-207ENST00000462636 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
CLDN12-207ENST00000462636 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
CLDN12-207ENST00000462636 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
CLDN12-207ENST00000462636 SYNJ2O15056 1496 aa13.71□□□□□ -0.21
CLDN12-207ENST00000462636 FGD5Q6ZNL6 1462 aa13.69□□□□□ -0.22
CLDN12-207ENST00000462636 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
CLDN12-207ENST00000462636 MSH5O43196 834 aa13.6□□□□□ -0.23
CLDN12-207ENST00000462636 PLPPR3Q6T4P5 718 aa13.6□□□□□ -0.23
CLDN12-207ENST00000462636 CUX1P39880 1505 aa13.59□□□□□ -0.23
CLDN12-207ENST00000462636 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLDN12-207ENST00000462636 FAM69CQ0P6D2 419 aa13.54□□□□□ -0.24
CLDN12-207ENST00000462636 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
CLDN12-207ENST00000462636 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
CLDN12-207ENST00000462636 JPH4Q96JJ6 628 aa13.51□□□□□ -0.25
CLDN12-207ENST00000462636 NUP160Q12769 1436 aa13.49□□□□□ -0.25
CLDN12-207ENST00000462636 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
CLDN12-207ENST00000462636 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
CLDN12-207ENST00000462636 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
CLDN12-207ENST00000462636 CEP170Q5SW79 1584 aa13.48□□□□□ -0.25
CLDN12-207ENST00000462636 PBRM1Q86U86 1689 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms