RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
PGBD2-203ENST00000462488 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.45
PGBD2-203ENST00000462488 ABCC9O60706 1549 aa17.63■□□□□ 0.41
PGBD2-203ENST00000462488 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
PGBD2-203ENST00000462488 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.29
PGBD2-203ENST00000462488 NACADO15069 1562 aa16.81■□□□□ 0.28
PGBD2-203ENST00000462488 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
PGBD2-203ENST00000462488 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
PGBD2-203ENST00000462488 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
PGBD2-203ENST00000462488 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
PGBD2-203ENST00000462488 UNC13AQ9UPW8 1703 aa16.46■□□□□ 0.23
PGBD2-203ENST00000462488 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
PGBD2-203ENST00000462488 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
PGBD2-203ENST00000462488 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
PGBD2-203ENST00000462488 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
PGBD2-203ENST00000462488 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.15
PGBD2-203ENST00000462488 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
PGBD2-203ENST00000462488 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
PGBD2-203ENST00000462488 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
PGBD2-203ENST00000462488 CECR2Q9BXF3 1484 aa15.83■□□□□ 0.12
PGBD2-203ENST00000462488 SMARCA4P51532 1647 aa15.58■□□□□ 0.09
PGBD2-203ENST00000462488 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.08
PGBD2-203ENST00000462488 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.07
PGBD2-203ENST00000462488 SMARCA2P51531 1590 aa15.51■□□□□ 0.07
PGBD2-203ENST00000462488 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
PGBD2-203ENST00000462488 MROH2BQ7Z745 1585 aa15.47■□□□□ 0.07
PGBD2-203ENST00000462488 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
PGBD2-203ENST00000462488 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
PGBD2-203ENST00000462488 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
PGBD2-203ENST00000462488 WIZO95785 1651 aa15.33■□□□□ 0.04
PGBD2-203ENST00000462488 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
PGBD2-203ENST00000462488 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
PGBD2-203ENST00000462488 NESP48681 1621 aa15.21■□□□□ 0.02
PGBD2-203ENST00000462488 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
PGBD2-203ENST00000462488 LAMC3Q9Y6N6 1575 aa15.13■□□□□ 0.01
PGBD2-203ENST00000462488 CADPSQ9ULU8 1353 aa15.1■□□□□ 0.01
PGBD2-203ENST00000462488 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
PGBD2-203ENST00000462488 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
PGBD2-203ENST00000462488 KIF21AQ7Z4S6 1674 aa15.02□□□□□ -0.01
PGBD2-203ENST00000462488 CUX2O14529 1486 aa15.01□□□□□ -0.01
PGBD2-203ENST00000462488 CCDC88BA6NC98 1476 aa14.97□□□□□ -0.01
PGBD2-203ENST00000462488 CFTRP13569 1480 aa14.95□□□□□ -0.02
PGBD2-203ENST00000462488 FANCD2Q9BXW9 1451 aa14.94□□□□□ -0.02
PGBD2-203ENST00000462488 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
PGBD2-203ENST00000462488 THOC2Q8NI27 1593 aaKnown RBP14.92□□□□□ -0.02
PGBD2-203ENST00000462488 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
PGBD2-203ENST00000462488 PRDM2Q13029 1718 aa14.84□□□□□ -0.03
PGBD2-203ENST00000462488 WDR62O43379 1518 aa14.8□□□□□ -0.04
PGBD2-203ENST00000462488 URB2Q14146 1524 aaKnown RBP14.75□□□□□ -0.05
PGBD2-203ENST00000462488 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
PGBD2-203ENST00000462488 DNAJC5Q9H3Z4 198 aa14.67□□□□□ -0.06
PGBD2-203ENST00000462488 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
PGBD2-203ENST00000462488 DNMBPQ6XZF7 1577 aa14.64□□□□□ -0.07
PGBD2-203ENST00000462488 IFT140Q96RY7 1462 aa14.6□□□□□ -0.07
PGBD2-203ENST00000462488 ZNF608Q9ULD9 1512 aaPredicted RBP14.53□□□□□ -0.08
PGBD2-203ENST00000462488 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
PGBD2-203ENST00000462488 SOGA1O94964 1423 aa14.53□□□□□ -0.08
PGBD2-203ENST00000462488 FGD5Q6ZNL6 1462 aa14.51□□□□□ -0.09
PGBD2-203ENST00000462488 CUX1P39880 1505 aa14.51□□□□□ -0.09
PGBD2-203ENST00000462488 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
PGBD2-203ENST00000462488 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
PGBD2-203ENST00000462488 AQRO60306 1485 aaKnown RBP eCLIP14.48□□□□□ -0.095e-7■■■■■ 28.2
PGBD2-203ENST00000462488 FBLN2P98095 1184 aa14.47□□□□□ -0.09
PGBD2-203ENST00000462488 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
PGBD2-203ENST00000462488 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
PGBD2-203ENST00000462488 TARBP1Q13395 1621 aaKnown RBP14.46□□□□□ -0.09
PGBD2-203ENST00000462488 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
PGBD2-203ENST00000462488 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
PGBD2-203ENST00000462488 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
PGBD2-203ENST00000462488 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
PGBD2-203ENST00000462488 BIVM-ERCC5R4GMW8 1640 aa14.35□□□□□ -0.11
PGBD2-203ENST00000462488 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
PGBD2-203ENST00000462488 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
PGBD2-203ENST00000462488 GAPVD1Q14C86 1478 aa14.34□□□□□ -0.11
PGBD2-203ENST00000462488 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.12
PGBD2-203ENST00000462488 CHD1O14646 1710 aa14.32□□□□□ -0.12
PGBD2-203ENST00000462488 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
PGBD2-203ENST00000462488 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
PGBD2-203ENST00000462488 PBRM1Q86U86 1689 aa14.3□□□□□ -0.12
PGBD2-203ENST00000462488 MAGI1Q96QZ7 1491 aaPredicted RBP14.28□□□□□ -0.12
PGBD2-203ENST00000462488 ABCA5Q8WWZ7 1642 aa14.25□□□□□ -0.13
PGBD2-203ENST00000462488 SYNJ2O15056 1496 aa14.24□□□□□ -0.13
PGBD2-203ENST00000462488 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
PGBD2-203ENST00000462488 RIMBP3CA6NJZ7 1639 aa14.17□□□□□ -0.14
PGBD2-203ENST00000462488 RIMBP3BA6NNM3 1639 aa14.17□□□□□ -0.14
PGBD2-203ENST00000462488 RIMBP3Q9UFD9 1639 aa14.17□□□□□ -0.14
PGBD2-203ENST00000462488 ERICH3Q5RHP9 1530 aa14.16□□□□□ -0.14
PGBD2-203ENST00000462488 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
PGBD2-203ENST00000462488 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
PGBD2-203ENST00000462488 CYB5RLQ6IPT4 315 aa14.15□□□□□ -0.14
PGBD2-203ENST00000462488 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
PGBD2-203ENST00000462488 GRIN2AQ12879 1464 aa14.13□□□□□ -0.15
PGBD2-203ENST00000462488 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
PGBD2-203ENST00000462488 IGF1RP08069 1367 aa14.08□□□□□ -0.16
PGBD2-203ENST00000462488 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
PGBD2-203ENST00000462488 CUL7Q14999 1698 aa14.04□□□□□ -0.16
PGBD2-203ENST00000462488 CARMIL1Q5VZK9 1371 aa14.04□□□□□ -0.16
PGBD2-203ENST00000462488 NUP160Q12769 1436 aa14.03□□□□□ -0.16
PGBD2-203ENST00000462488 ARAP1Q96P48 1450 aa14.02□□□□□ -0.16
PGBD2-203ENST00000462488 PHF23Q9BUL5 403 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms