RNA–Protein interactions for RNA: ENST00000462183.1

GCLM-202, Transcript of glutamate-cysteine ligase modifier subunit, humanhuman

TSL 3

Gene GCLM, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLM-202ENST00000462183 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
GCLM-202ENST00000462183 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
GCLM-202ENST00000462183 ABCC9O60706 1549 aa25.01■■□□□ 1.59
GCLM-202ENST00000462183 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
GCLM-202ENST00000462183 NACADO15069 1562 aa24.04■■□□□ 1.44
GCLM-202ENST00000462183 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
GCLM-202ENST00000462183 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
GCLM-202ENST00000462183 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
GCLM-202ENST00000462183 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
GCLM-202ENST00000462183 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
GCLM-202ENST00000462183 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
GCLM-202ENST00000462183 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
GCLM-202ENST00000462183 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
GCLM-202ENST00000462183 SHROOM4Q9ULL8 1493 aa23.12■■□□□ 1.29
GCLM-202ENST00000462183 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
GCLM-202ENST00000462183 EIF4G1Q04637 1599 aaKnown RBP22.77■■□□□ 1.24
GCLM-202ENST00000462183 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
GCLM-202ENST00000462183 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
GCLM-202ENST00000462183 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
GCLM-202ENST00000462183 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
GCLM-202ENST00000462183 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
GCLM-202ENST00000462183 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
GCLM-202ENST00000462183 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
GCLM-202ENST00000462183 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
GCLM-202ENST00000462183 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
GCLM-202ENST00000462183 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
GCLM-202ENST00000462183 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
GCLM-202ENST00000462183 WIZO95785 1651 aa21.95■■□□□ 1.1
GCLM-202ENST00000462183 AEBP2Q6ZN18 517 aaPredicted RBP21.91■■□□□ 1.1
GCLM-202ENST00000462183 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
GCLM-202ENST00000462183 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
GCLM-202ENST00000462183 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
GCLM-202ENST00000462183 NESP48681 1621 aa21.63■■□□□ 1.05
GCLM-202ENST00000462183 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
GCLM-202ENST00000462183 ERCC6Q03468 1493 aa21.56■■□□□ 1.04
GCLM-202ENST00000462183 PRDM2Q13029 1718 aa21.52■■□□□ 1.03
GCLM-202ENST00000462183 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
GCLM-202ENST00000462183 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
GCLM-202ENST00000462183 CUX2O14529 1486 aa21.38■■□□□ 1.01
GCLM-202ENST00000462183 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
GCLM-202ENST00000462183 CFTRP13569 1480 aa21.33■■□□□ 1.01
GCLM-202ENST00000462183 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
GCLM-202ENST00000462183 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
GCLM-202ENST00000462183 FANCD2Q9BXW9 1451 aa21.25■□□□□ 0.99
GCLM-202ENST00000462183 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
GCLM-202ENST00000462183 WDR62O43379 1518 aa21.21■□□□□ 0.99
GCLM-202ENST00000462183 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
GCLM-202ENST00000462183 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
GCLM-202ENST00000462183 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
GCLM-202ENST00000462183 TOPBP1Q92547 1522 aa20.93■□□□□ 0.94
GCLM-202ENST00000462183 ABCC8Q09428 1581 aa20.89■□□□□ 0.93
GCLM-202ENST00000462183 IFT140Q96RY7 1462 aa20.77■□□□□ 0.92
GCLM-202ENST00000462183 TARBP1Q13395 1621 aaKnown RBP20.77■□□□□ 0.92
GCLM-202ENST00000462183 CUX1P39880 1505 aa20.76■□□□□ 0.91
GCLM-202ENST00000462183 EIF4G3O43432 1585 aaKnown RBP20.75■□□□□ 0.91
GCLM-202ENST00000462183 POLA1P09884 1462 aaPredicted RBP20.74■□□□□ 0.91
GCLM-202ENST00000462183 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
GCLM-202ENST00000462183 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
GCLM-202ENST00000462183 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
GCLM-202ENST00000462183 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
GCLM-202ENST00000462183 DNAJC5Q9H3Z4 198 aa20.62■□□□□ 0.89
GCLM-202ENST00000462183 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
GCLM-202ENST00000462183 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
GCLM-202ENST00000462183 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
GCLM-202ENST00000462183 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
GCLM-202ENST00000462183 PBRM1Q86U86 1689 aa20.58■□□□□ 0.88
GCLM-202ENST00000462183 CHD1O14646 1710 aa20.57■□□□□ 0.88
GCLM-202ENST00000462183 SOGA1O94964 1423 aa20.56■□□□□ 0.88
GCLM-202ENST00000462183 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
GCLM-202ENST00000462183 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
GCLM-202ENST00000462183 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
GCLM-202ENST00000462183 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
GCLM-202ENST00000462183 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
GCLM-202ENST00000462183 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
GCLM-202ENST00000462183 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
GCLM-202ENST00000462183 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
GCLM-202ENST00000462183 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
GCLM-202ENST00000462183 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
GCLM-202ENST00000462183 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
GCLM-202ENST00000462183 SYNJ2O15056 1496 aa20.27■□□□□ 0.84
GCLM-202ENST00000462183 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
GCLM-202ENST00000462183 RIMBP3CA6NJZ7 1639 aa20.25■□□□□ 0.83
GCLM-202ENST00000462183 RIMBP3BA6NNM3 1639 aa20.25■□□□□ 0.83
GCLM-202ENST00000462183 RIMBP3Q9UFD9 1639 aa20.25■□□□□ 0.83
GCLM-202ENST00000462183 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
GCLM-202ENST00000462183 FBLN2P98095 1184 aa20.2■□□□□ 0.82
GCLM-202ENST00000462183 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
GCLM-202ENST00000462183 CUL7Q14999 1698 aa20.16■□□□□ 0.82
GCLM-202ENST00000462183 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
GCLM-202ENST00000462183 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
GCLM-202ENST00000462183 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
GCLM-202ENST00000462183 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
GCLM-202ENST00000462183 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
GCLM-202ENST00000462183 NUP160Q12769 1436 aa20.04■□□□□ 0.8
GCLM-202ENST00000462183 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.8
GCLM-202ENST00000462183 SHROOM2Q13796 1616 aa20.02■□□□□ 0.8
GCLM-202ENST00000462183 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
GCLM-202ENST00000462183 IGF1RP08069 1367 aa19.95■□□□□ 0.79
GCLM-202ENST00000462183 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
GCLM-202ENST00000462183 ERCC6L2Q5T890 1561 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms